RNA–Protein interactions for RNA: ENSMUST00000173369.1

Trim39-205, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

TSL 1 (best) BASIC

Gene Trim39, Length 2,914 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-205ENSMUST00000173369 Wisp3D3Z5L9 354 aa6.83□□□□□ -1.32
Trim39-205ENSMUST00000173369 MyadmO35682 320 aaKnown RBP6.83□□□□□ -1.32
Trim39-205ENSMUST00000173369 Cd200O54901 278 aa6.83□□□□□ -1.32
Trim39-205ENSMUST00000173369 Ifitm5O88728 134 aa6.83□□□□□ -1.32
Trim39-205ENSMUST00000173369 Hoxa1P09022 331 aa6.83□□□□□ -1.32
Trim39-205ENSMUST00000173369 Rag2P21784 527 aa6.83□□□□□ -1.32
Trim39-205ENSMUST00000173369 PpicP30412 212 aaKnown RBP6.83□□□□□ -1.32
Trim39-205ENSMUST00000173369 Mc5rP41149 325 aa6.83□□□□□ -1.32
Trim39-205ENSMUST00000173369 S100a11P50543 98 aaKnown RBP6.83□□□□□ -1.32
Trim39-205ENSMUST00000173369 Gcm1P70348 436 aa6.83□□□□□ -1.32
Trim39-205ENSMUST00000173369 Neurog3P70661 214 aa6.83□□□□□ -1.32
Trim39-205ENSMUST00000173369 Fbxl7Q5BJ29 491 aa6.83□□□□□ -1.32
Trim39-205ENSMUST00000173369 HykkQ5U5V2 376 aa6.83□□□□□ -1.32
Trim39-205ENSMUST00000173369 Ifna15Q61718 190 aa6.83□□□□□ -1.32
Trim39-205ENSMUST00000173369 Olfr1246Q7TQZ6 314 aa6.83□□□□□ -1.32
Trim39-205ENSMUST00000173369 Tm2d3Q8BJ83 261 aa6.83□□□□□ -1.32
Trim39-205ENSMUST00000173369 Lmf2Q8C3X8 702 aaKnown RBP6.83□□□□□ -1.32
Trim39-205ENSMUST00000173369 Q8R2K8 148 aa6.83□□□□□ -1.32
Trim39-205ENSMUST00000173369 Olfr1350Q8VF34 308 aa6.83□□□□□ -1.32
Trim39-205ENSMUST00000173369 Olfr1384Q8VFA8 318 aa6.83□□□□□ -1.32
Trim39-205ENSMUST00000173369 Olfr1448Q8VFX1 314 aa6.83□□□□□ -1.32
Trim39-205ENSMUST00000173369 Hsbp1Q9CQZ1 76 aa6.83□□□□□ -1.32
Trim39-205ENSMUST00000173369 Xrcc3Q9CXE6 349 aa6.83□□□□□ -1.32
Trim39-205ENSMUST00000173369 Tmem52Q9D702 196 aa6.83□□□□□ -1.32
Trim39-205ENSMUST00000173369 Iqcf5Q9DAL7 148 aa6.83□□□□□ -1.32
Trim39-205ENSMUST00000173369 Birc7A2AWP0 285 aa6.83□□□□□ -1.32
Trim39-205ENSMUST00000173369 Psg20E9Q9B4 475 aa6.83□□□□□ -1.32
Trim39-205ENSMUST00000173369 Gm20918J3QN17 227 aa6.83□□□□□ -1.32
Trim39-205ENSMUST00000173369 P01724 129 aa6.83□□□□□ -1.32
Trim39-205ENSMUST00000173369 MgmtP26187 211 aa6.83□□□□□ -1.32
Trim39-205ENSMUST00000173369 Svs5P30933 122 aa6.83□□□□□ -1.32
Trim39-205ENSMUST00000173369 Mdga2P60755 949 aa6.83□□□□□ -1.32
Trim39-205ENSMUST00000173369 Vmn1r181Q0P547 304 aa6.83□□□□□ -1.32
Trim39-205ENSMUST00000173369 Rab39bQ8BHC1 213 aa6.83□□□□□ -1.32
Trim39-205ENSMUST00000173369 Gm26558Q8BLW8 286 aa6.83□□□□□ -1.32
Trim39-205ENSMUST00000173369 Lyrm2Q8R033 88 aa6.83□□□□□ -1.32
Trim39-205ENSMUST00000173369 AmtnQ9D3J8 213 aa6.83□□□□□ -1.32
Trim39-205ENSMUST00000173369 Olfr943Q9EQ92 314 aa6.83□□□□□ -1.32
Trim39-205ENSMUST00000173369 Chrm2Q9ERZ4 466 aa6.83□□□□□ -1.32
Trim39-205ENSMUST00000173369 Clec4dQ9Z2H6 219 aa6.83□□□□□ -1.32
Trim39-205ENSMUST00000173369 Gm12057A0A087WR21 115 aa6.83□□□□□ -1.32
Trim39-205ENSMUST00000173369 Olfr1274-psA0A1L1SQ02 309 aa6.83□□□□□ -1.32
Trim39-205ENSMUST00000173369 Gm13547A2ARC0 163 aa6.83□□□□□ -1.32
Trim39-205ENSMUST00000173369 Kcnk15B2RVL1 343 aa6.83□□□□□ -1.32
Trim39-205ENSMUST00000173369 Vmn1r180B9EK86 305 aa6.83□□□□□ -1.32
Trim39-205ENSMUST00000173369 Gm5519D3Z175 170 aa6.83□□□□□ -1.32
Trim39-205ENSMUST00000173369 Vmn1r113G3UWI8 307 aa6.83□□□□□ -1.32
Trim39-205ENSMUST00000173369 IfngP01580 155 aa6.83□□□□□ -1.32
Trim39-205ENSMUST00000173369 C5ar1P30993 351 aa6.83□□□□□ -1.32
Trim39-205ENSMUST00000173369 Lhx4P53776 390 aa6.83□□□□□ -1.32
Trim39-205ENSMUST00000173369 Vmn1r236Q05A06 334 aa6.83□□□□□ -1.32
Trim39-205ENSMUST00000173369 Rbp2Q08652 134 aa6.83□□□□□ -1.32
Trim39-205ENSMUST00000173369 Olfr1212Q7TR08 311 aa6.83□□□□□ -1.32
Trim39-205ENSMUST00000173369 Ankrd55Q8BLD6 626 aa6.83□□□□□ -1.32
Trim39-205ENSMUST00000173369 TskuQ8CBR6 354 aa6.83□□□□□ -1.32
Trim39-205ENSMUST00000173369 Vmn1r19Q8R2C7 308 aa6.83□□□□□ -1.32
Trim39-205ENSMUST00000173369 Nit1Q8VDK1 323 aa6.83□□□□□ -1.32
Trim39-205ENSMUST00000173369 Olfr1420Q8VF55 309 aa6.83□□□□□ -1.32
Trim39-205ENSMUST00000173369 Olfr559Q8VH14 318 aa6.83□□□□□ -1.32
Trim39-205ENSMUST00000173369 Cysltr2Q920A1 309 aa6.83□□□□□ -1.32
Trim39-205ENSMUST00000173369 Tspan13Q9D8C2 204 aa6.83□□□□□ -1.32
Trim39-205ENSMUST00000173369 Fgf16Q9ESL8 207 aa6.83□□□□□ -1.32
Trim39-205ENSMUST00000173369 Olfr159Q9QZ19 319 aa6.83□□□□□ -1.32
Trim39-205ENSMUST00000173369 Gm5089A1L3C8 106 aa6.82□□□□□ -1.32
Trim39-205ENSMUST00000173369 Gm12355A2A4X6 163 aa6.82□□□□□ -1.32
Trim39-205ENSMUST00000173369 Olfr39E9PVX1 319 aa6.82□□□□□ -1.32
Trim39-205ENSMUST00000173369 Tnfsf12O54907 249 aa6.82□□□□□ -1.32
Trim39-205ENSMUST00000173369 Tcrg-V1P06325 135 aa6.82□□□□□ -1.32
Trim39-205ENSMUST00000173369 Fgf8P37237 268 aa6.82□□□□□ -1.32
Trim39-205ENSMUST00000173369 Srsf3P84104 164 aaKnown RBP6.82□□□□□ -1.32
Trim39-205ENSMUST00000173369 Pate4Q09098 99 aa6.82□□□□□ -1.32
Trim39-205ENSMUST00000173369 Psg19Q4KL31 475 aa6.82□□□□□ -1.32
Trim39-205ENSMUST00000173369 Scarb1Q61009 509 aa6.82□□□□□ -1.32
Trim39-205ENSMUST00000173369 Zfp663Q6NXM6 656 aa6.82□□□□□ -1.32
Trim39-205ENSMUST00000173369 Olfr492Q8VFD1 314 aa6.82□□□□□ -1.32
Trim39-205ENSMUST00000173369 Olfr52Q8VFL0 319 aa6.82□□□□□ -1.32
Trim39-205ENSMUST00000173369 Pbp2Q8VIN1 187 aa6.82□□□□□ -1.32
Trim39-205ENSMUST00000173369 ManbalQ9D8X0 85 aa6.82□□□□□ -1.32
Trim39-205ENSMUST00000173369 Wdr61Q9ERF3 305 aa6.82□□□□□ -1.32
Trim39-205ENSMUST00000173369 Ms4a4bQ9ES61 226 aa6.82□□□□□ -1.32
Trim39-205ENSMUST00000173369 Syt7Q9R0N7 403 aa6.82□□□□□ -1.32
Trim39-205ENSMUST00000173369 Olfr548-ps1A0A1B0GSG0 314 aa6.82□□□□□ -1.32
Trim39-205ENSMUST00000173369 Olfr920E9Q413 310 aa6.82□□□□□ -1.32
Trim39-205ENSMUST00000173369 Gm27021M0QWE2 156 aa6.82□□□□□ -1.32
Trim39-205ENSMUST00000173369 P10404 641 aa6.82□□□□□ -1.32
Trim39-205ENSMUST00000173369 Hist1h2bfP10853 126 aa6.82□□□□□ -1.32
Trim39-205ENSMUST00000173369 Ppp1ccP63087 323 aa6.82□□□□□ -1.32
Trim39-205ENSMUST00000173369 B020031M17RikQ3UT11 173 aa6.82□□□□□ -1.32
Trim39-205ENSMUST00000173369 Gm10840Q3V2K9 103 aa6.82□□□□□ -1.32
Trim39-205ENSMUST00000173369 Zfand3Q497H0 227 aa6.82□□□□□ -1.32
Trim39-205ENSMUST00000173369 Sdr39u1Q5M8N4 308 aa6.82□□□□□ -1.32
Trim39-205ENSMUST00000173369 Hist1h2bbQ64475 126 aa6.82□□□□□ -1.32
Trim39-205ENSMUST00000173369 Parp16Q7TMM8 322 aa6.82□□□□□ -1.32
Trim39-205ENSMUST00000173369 Olfr1290Q7TQX8 312 aa6.82□□□□□ -1.32
Trim39-205ENSMUST00000173369 Olfr987Q7TRA2 309 aa6.82□□□□□ -1.32
Trim39-205ENSMUST00000173369 Prss34Q80UR4 318 aa6.82□□□□□ -1.32
Trim39-205ENSMUST00000173369 RhofQ8BYP3 211 aa6.82□□□□□ -1.32
Trim39-205ENSMUST00000173369 Hist1h2bkQ8CGP1 126 aaKnown RBP6.82□□□□□ -1.32
Trim39-205ENSMUST00000173369 Hist1h2bpQ8CGP2 126 aaKnown RBP6.82□□□□□ -1.32
Trim39-205ENSMUST00000173369 Fam174bQ8K064 153 aa6.82□□□□□ -1.32
Retrieved 100 of 22,080 RNA–protein pairs in 169.9 ms