RNA–Protein interactions for RNA: ENSMUST00000003645.8

Ercc1-201, Transcript of DNA excision repair protein ERCC-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ercc1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-201ENSMUST00000003645 NfybP63139 207 aa11.75□□□□□ -0.53
Ercc1-201ENSMUST00000003645 Q3KQP7 184 aa11.75□□□□□ -0.53
Ercc1-201ENSMUST00000003645 Zic4Q61467 341 aa11.75□□□□□ -0.53
Ercc1-201ENSMUST00000003645 Neil2Q6R2P8 329 aa11.75□□□□□ -0.53
Ercc1-201ENSMUST00000003645 Olfr1042Q7TR81 313 aa11.75□□□□□ -0.53
Ercc1-201ENSMUST00000003645 Gm17334Q8C6U3 126 aa11.75□□□□□ -0.53
Ercc1-201ENSMUST00000003645 Iba57Q8CAK1 358 aaKnown RBP11.75□□□□□ -0.53
Ercc1-201ENSMUST00000003645 Ndufb3Q9CQZ6 104 aa11.75□□□□□ -0.53
Ercc1-201ENSMUST00000003645 ManfQ9CXI5 179 aaKnown RBP11.75□□□□□ -0.53
Ercc1-201ENSMUST00000003645 Alkbh7Q9D6Z0 221 aa11.75□□□□□ -0.53
Ercc1-201ENSMUST00000003645 Hsd17b11Q9EQ06 298 aa11.75□□□□□ -0.53
Ercc1-201ENSMUST00000003645 Tlnrd1Q9ERE8 362 aa11.75□□□□□ -0.53
Ercc1-201ENSMUST00000003645 Bhlha15Q9QYC3 197 aa11.75□□□□□ -0.53
Ercc1-201ENSMUST00000003645 Timm9Q9WV98 89 aaKnown RBP11.75□□□□□ -0.53
Ercc1-201ENSMUST00000003645 Qrich2A0A140LIY9 2337 aa11.75□□□□□ -0.53
Ercc1-201ENSMUST00000003645 Tcrg-V5A0A0G2JGV5 113 aa11.74□□□□□ -0.53
Ercc1-201ENSMUST00000003645 Igkv4-51A0N8I8 119 aa11.74□□□□□ -0.53
Ercc1-201ENSMUST00000003645 Gm15557A6PWY0 234 aa11.74□□□□□ -0.53
Ercc1-201ENSMUST00000003645 AsmtD3KU66 387 aa11.74□□□□□ -0.53
Ercc1-201ENSMUST00000003645 Gm5799E9Q2M1 201 aa11.74□□□□□ -0.53
Ercc1-201ENSMUST00000003645 Gm10020E9QAZ2 204 aa11.74□□□□□ -0.53
Ercc1-201ENSMUST00000003645 Sult2a4L7N245 285 aa11.74□□□□□ -0.53
Ercc1-201ENSMUST00000003645 Rnf5O35445 180 aa11.74□□□□□ -0.53
Ercc1-201ENSMUST00000003645 Bcl2l11O54918 196 aa11.74□□□□□ -0.53
Ercc1-201ENSMUST00000003645 Slc25a17O70579 307 aa11.74□□□□□ -0.53
Ercc1-201ENSMUST00000003645 Muc13P19467 573 aa11.74□□□□□ -0.53
Ercc1-201ENSMUST00000003645 Lrcol1Q3URS3 161 aa11.74□□□□□ -0.53
Ercc1-201ENSMUST00000003645 SepsecsQ6P6M7 504 aa11.74□□□□□ -0.53
Ercc1-201ENSMUST00000003645 Thoc7Q7TMY4 204 aaKnown RBP11.74□□□□□ -0.53
Ercc1-201ENSMUST00000003645 Ifna12Q80SS5 189 aa11.74□□□□□ -0.53
Ercc1-201ENSMUST00000003645 Magt1Q9CQY5 335 aa11.74□□□□□ -0.53
Ercc1-201ENSMUST00000003645 Hsf4Q9R0L1 492 aa11.74□□□□□ -0.53
Ercc1-201ENSMUST00000003645 Chst4Q9R1I1 388 aa11.74□□□□□ -0.53
Ercc1-201ENSMUST00000003645 Ighv5-17A0A075B5R1 117 aa11.73□□□□□ -0.53
Ercc1-201ENSMUST00000003645 Igkv4-57A0A0A6YYE7 117 aa11.73□□□□□ -0.53
Ercc1-201ENSMUST00000003645 A0A1L1SV24 88 aa11.73□□□□□ -0.53
Ercc1-201ENSMUST00000003645 Tstd1E9PY03 133 aa11.73□□□□□ -0.53
Ercc1-201ENSMUST00000003645 Fam98cE9PYD1 344 aa11.73□□□□□ -0.53
Ercc1-201ENSMUST00000003645 E430018J23RikE9PZQ8 461 aa11.73□□□□□ -0.53
Ercc1-201ENSMUST00000003645 Olfr571E9Q407 322 aa11.73□□□□□ -0.53
Ercc1-201ENSMUST00000003645 Gm6526G3X9Q9 198 aa11.73□□□□□ -0.53
Ercc1-201ENSMUST00000003645 Gm21915J3QPM7 133 aa11.73□□□□□ -0.53
Ercc1-201ENSMUST00000003645 Hoxa1P09022 331 aa11.73□□□□□ -0.53
Ercc1-201ENSMUST00000003645 Ca5aP23589 299 aa11.73□□□□□ -0.53
Ercc1-201ENSMUST00000003645 Hes1P35428 282 aa11.73□□□□□ -0.53
Ercc1-201ENSMUST00000003645 P58686 83 aa11.73□□□□□ -0.53
Ercc1-201ENSMUST00000003645 CycsP62897 105 aaKnown RBP11.73□□□□□ -0.53
Ercc1-201ENSMUST00000003645 SgcaP82350 387 aa11.73□□□□□ -0.53
Ercc1-201ENSMUST00000003645 CrygcQ61597 174 aa11.73□□□□□ -0.53
Ercc1-201ENSMUST00000003645 Exosc2Q8VBV3 293 aaKnown RBP11.73□□□□□ -0.53
Ercc1-201ENSMUST00000003645 Pfdn1Q9CWM4 122 aa11.73□□□□□ -0.53
Ercc1-201ENSMUST00000003645 Mgat4cQ9D306 478 aa11.73□□□□□ -0.53
Ercc1-201ENSMUST00000003645 Cox20Q9D7J4 117 aa11.73□□□□□ -0.53
Ercc1-201ENSMUST00000003645 Crlf1Q9JM58 425 aa11.73□□□□□ -0.53
Ercc1-201ENSMUST00000003645 NagkQ9QZ08 343 aa11.73□□□□□ -0.53
Ercc1-201ENSMUST00000003645 LenepQ9WVB6 61 aa11.73□□□□□ -0.53
Ercc1-201ENSMUST00000003645 Dmrtb1A2A9I7 359 aa11.72□□□□□ -0.53
Ercc1-201ENSMUST00000003645 Cldn34dA2AGU5 210 aa11.72□□□□□ -0.53
Ercc1-201ENSMUST00000003645 Gm14408E9Q6B9 136 aa11.72□□□□□ -0.53
Ercc1-201ENSMUST00000003645 Mesp2O08574 370 aa11.72□□□□□ -0.53
Ercc1-201ENSMUST00000003645 Oprk1P33534 380 aa11.72□□□□□ -0.53
Ercc1-201ENSMUST00000003645 ApohQ01339 345 aa11.72□□□□□ -0.53
Ercc1-201ENSMUST00000003645 MidnQ3TPJ7 465 aa11.72□□□□□ -0.53
Ercc1-201ENSMUST00000003645 Zfand3Q497H0 227 aa11.72□□□□□ -0.53
Ercc1-201ENSMUST00000003645 Tbpl2Q6SJ95 350 aa11.72□□□□□ -0.53
Ercc1-201ENSMUST00000003645 Higd1cQ76I25 96 aa11.72□□□□□ -0.53
Ercc1-201ENSMUST00000003645 TpppQ7TQD2 218 aaKnown RBP11.72□□□□□ -0.53
Ercc1-201ENSMUST00000003645 Fam24aQ8CF27 98 aa11.72□□□□□ -0.53
Ercc1-201ENSMUST00000003645 Olfr1323Q8VF35 309 aa11.72□□□□□ -0.53
Ercc1-201ENSMUST00000003645 B3gnt9Q8VI16 399 aa11.72□□□□□ -0.53
Ercc1-201ENSMUST00000003645 Ppp1r14aQ91VC7 147 aa11.72□□□□□ -0.53
Ercc1-201ENSMUST00000003645 B3galnt1Q920V1 331 aa11.72□□□□□ -0.53
Ercc1-201ENSMUST00000003645 Tmem189Q99LQ7 271 aa11.72□□□□□ -0.53
Ercc1-201ENSMUST00000003645 Sytl3Q99N48 607 aa11.72□□□□□ -0.53
Ercc1-201ENSMUST00000003645 Mrpl3Q99N95 348 aa11.72□□□□□ -0.53
Ercc1-201ENSMUST00000003645 Fam219aQ9D772 157 aa11.72□□□□□ -0.53
Ercc1-201ENSMUST00000003645 Zfp119aQ9JIC0 545 aa11.72□□□□□ -0.53
Ercc1-201ENSMUST00000003645 Ovol1Q9WTJ2 267 aa11.72□□□□□ -0.53
Ercc1-201ENSMUST00000003645 Trbv19A0A0B4J1H4 117 aa11.71□□□□□ -0.53
Ercc1-201ENSMUST00000003645 Trav23A0A0G2JG17 115 aa11.71□□□□□ -0.53
Ercc1-201ENSMUST00000003645 Olfr465-ps1A0A0U1RPZ4 315 aa11.71□□□□□ -0.53
Ercc1-201ENSMUST00000003645 Olfr1248A0A1L1SSZ5 307 aa11.71□□□□□ -0.53
Ercc1-201ENSMUST00000003645 A0A286YDM5 308 aa11.71□□□□□ -0.53
Ercc1-201ENSMUST00000003645 Zfp980A2A9J5 645 aa11.71□□□□□ -0.53
Ercc1-201ENSMUST00000003645 Gm21994F6T2D2 329 aa11.71□□□□□ -0.53
Ercc1-201ENSMUST00000003645 Gm21974F6W3F3 119 aa11.71□□□□□ -0.53
Ercc1-201ENSMUST00000003645 P04212 136 aa11.71□□□□□ -0.53
Ercc1-201ENSMUST00000003645 Hspb7P35385 169 aa11.71□□□□□ -0.53
Ercc1-201ENSMUST00000003645 PlaurP35456 327 aa11.71□□□□□ -0.53
Ercc1-201ENSMUST00000003645 Hist1h1aP43275 213 aa11.71□□□□□ -0.53
Ercc1-201ENSMUST00000003645 Slc25a4P48962 298 aaKnown RBP11.71□□□□□ -0.53
Ercc1-201ENSMUST00000003645 Nkx2-1P50220 372 aa11.71□□□□□ -0.53
Ercc1-201ENSMUST00000003645 Lclat1Q3UN02 376 aa11.71□□□□□ -0.53
Ercc1-201ENSMUST00000003645 Nhlh2Q64221 135 aa11.71□□□□□ -0.53
Ercc1-201ENSMUST00000003645 St8sia3Q64689 380 aa11.71□□□□□ -0.53
Ercc1-201ENSMUST00000003645 Vma21Q78T54 101 aa11.71□□□□□ -0.53
Ercc1-201ENSMUST00000003645 Olfr205Q7TS37 305 aa11.71□□□□□ -0.53
Ercc1-201ENSMUST00000003645 Asphd2Q80VP9 343 aa11.71□□□□□ -0.53
Ercc1-201ENSMUST00000003645 Srsf12Q8C8K3 266 aa11.71□□□□□ -0.53
Ercc1-201ENSMUST00000003645 Vmn1r26Q8R2D7 339 aa11.71□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 47 ms