RNA–Protein interactions for RNA: ENST00000629045.1

SCARNA4-201, small Cajal body-specific RNA 4, humanhuman

BASIC

Gene SCARNA4, Length 128 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA4-201ENST00000629045 TAF1AQ15573 450 aaPredicted RBP-0.09□□□□□ -2.42
SCARNA4-201ENST00000629045 RGS21Q2M5E4 152 aa-0.09□□□□□ -2.42
SCARNA4-201ENST00000629045 LIN52Q52LA3 116 aa-0.09□□□□□ -2.42
SCARNA4-201ENST00000629045 GOLT1AQ6ZVE7 132 aa-0.09□□□□□ -2.42
SCARNA4-201ENST00000629045 PRR15Q8IV56 129 aa-0.09□□□□□ -2.42
SCARNA4-201ENST00000629045 LRRC18Q8N456 261 aa-0.09□□□□□ -2.42
SCARNA4-201ENST00000629045 OR10X1Q8NGY0 326 aa-0.09□□□□□ -2.42
SCARNA4-201ENST00000629045 POPDC3Q9HBV1 291 aa-0.09□□□□□ -2.42
SCARNA4-201ENST00000629045 ENY2Q9NPA8 101 aa-0.09□□□□□ -2.42
SCARNA4-201ENST00000629045 SLC22A13Q9Y226 551 aa-0.09□□□□□ -2.42
SCARNA4-201ENST00000629045 PLB1Q6P1J6 1458 aa-0.1□□□□□ -2.42
SCARNA4-201ENST00000629045 KNTC1P50748 2209 aa-0.1□□□□□ -2.43
SCARNA4-201ENST00000629045 C9orf170A2RU37 121 aa-0.1□□□□□ -2.43
SCARNA4-201ENST00000629045 GPR31O00270 319 aa-0.1□□□□□ -2.43
SCARNA4-201ENST00000629045 CRHP06850 196 aa-0.1□□□□□ -2.43
SCARNA4-201ENST00000629045 PXT1Q8NFP0 134 aa-0.1□□□□□ -2.43
SCARNA4-201ENST00000629045 ZHX1-C8orf76Q96EF9 292 aa-0.1□□□□□ -2.43
SCARNA4-201ENST00000629045 RMND5BQ96G75 393 aaPredicted RBP-0.1□□□□□ -2.43
SCARNA4-201ENST00000629045 PRAP1Q96NZ9 151 aa-0.1□□□□□ -2.43
SCARNA4-201ENST00000629045 CACYBPQ9HB71 228 aaKnown RBP-0.1□□□□□ -2.43
SCARNA4-201ENST00000629045 PARVGQ9HBI0 331 aa-0.1□□□□□ -2.43
SCARNA4-201ENST00000629045 DMBT1Q9UGM3 2413 aaPredicted RBP-0.11□□□□□ -2.43
SCARNA4-201ENST00000629045 hDV103S1A0JD37 113 aa-0.11□□□□□ -2.43
SCARNA4-201ENST00000629045 BANF1O75531 89 aa-0.11□□□□□ -2.43
SCARNA4-201ENST00000629045 MIR22HGQ0VDD5 57 aa-0.11□□□□□ -2.43
SCARNA4-201ENST00000629045 KLRD1Q13241 179 aa-0.11□□□□□ -2.43
SCARNA4-201ENST00000629045 KRTAP6-1Q3LI64 71 aa-0.11□□□□□ -2.43
SCARNA4-201ENST00000629045 LINC00299Q6ZSB3 139 aa-0.11□□□□□ -2.43
SCARNA4-201ENST00000629045 BDP1A6H8Y1 2624 aa-0.12□□□□□ -2.43
SCARNA4-201ENST00000629045 ANKRD17O75179 2603 aaKnown RBP-0.12□□□□□ -2.43
SCARNA4-201ENST00000629045 FANCMQ8IYD8 2048 aa-0.12□□□□□ -2.43
SCARNA4-201ENST00000629045 DUXBA0A1W2PPF3 345 aa-0.12□□□□□ -2.43
SCARNA4-201ENST00000629045 IGHV3-33P01772 117 aa-0.12□□□□□ -2.43
SCARNA4-201ENST00000629045 TMBIM6P55061 237 aa-0.12□□□□□ -2.43
SCARNA4-201ENST00000629045 ARPP19P56211 112 aa-0.12□□□□□ -2.43
SCARNA4-201ENST00000629045 HSPE1P61604 102 aaKnown RBP-0.12□□□□□ -2.43
SCARNA4-201ENST00000629045 CASC2Q6XLA1 102 aa-0.12□□□□□ -2.43
SCARNA4-201ENST00000629045 IFT20Q8IY31 132 aa-0.12□□□□□ -2.43
SCARNA4-201ENST00000629045 C9orf16Q9BUW7 83 aa-0.12□□□□□ -2.43
SCARNA4-201ENST00000629045 PTPRZ1P23471 2315 aaPredicted RBP-0.12□□□□□ -2.43
SCARNA4-201ENST00000629045 DSTQ03001 7570 aaKnown RBP-0.12□□□□□ -2.43
SCARNA4-201ENST00000629045 ERBINQ96RT1 1412 aa-0.13□□□□□ -2.43
SCARNA4-201ENST00000629045 ZGRF1Q86YA3 2104 aa-0.13□□□□□ -2.43
SCARNA4-201ENST00000629045 CEP164Q9UPV0 1460 aa-0.13□□□□□ -2.43
SCARNA4-201ENST00000629045 A0A0J9YY99 117 aa-0.13□□□□□ -2.43
SCARNA4-201ENST00000629045 RER1O15258 196 aa-0.13□□□□□ -2.43
SCARNA4-201ENST00000629045 NDUFC2O95298 119 aa-0.13□□□□□ -2.43
SCARNA4-201ENST00000629045 C1QBP02746 253 aa-0.13□□□□□ -2.43
SCARNA4-201ENST00000629045 IFNA4P05014 189 aa-0.13□□□□□ -2.43
SCARNA4-201ENST00000629045 CXCL1P09341 107 aa-0.13□□□□□ -2.43
SCARNA4-201ENST00000629045 CYBAP13498 195 aa-0.13□□□□□ -2.43
SCARNA4-201ENST00000629045 PDE6GP18545 87 aa-0.13□□□□□ -2.43
SCARNA4-201ENST00000629045 RPL37AP61513 92 aaKnown RBP-0.13□□□□□ -2.43
SCARNA4-201ENST00000629045 NCALDP61601 193 aa-0.13□□□□□ -2.43
SCARNA4-201ENST00000629045 FOXI2Q6ZQN5 318 aa-0.13□□□□□ -2.43
SCARNA4-201ENST00000629045 C10orf111Q8N326 155 aa-0.13□□□□□ -2.43
SCARNA4-201ENST00000629045 PPTC7Q8NI37 304 aa-0.13□□□□□ -2.43
SCARNA4-201ENST00000629045 LIMD2Q9BT23 127 aa-0.13□□□□□ -2.43
SCARNA4-201ENST00000629045 IGF2RP11717 2491 aa-0.14□□□□□ -2.43
SCARNA4-201ENST00000629045 TPRP12270 2363 aaKnown RBP-0.14□□□□□ -2.43
SCARNA4-201ENST00000629045 LYRM1O43325 122 aa-0.14□□□□□ -2.43
SCARNA4-201ENST00000629045 SULT1C4O75897 302 aa-0.14□□□□□ -2.43
SCARNA4-201ENST00000629045 LY6G6CO95867 125 aa-0.14□□□□□ -2.43
SCARNA4-201ENST00000629045 SERPINA1P01009 418 aa-0.14□□□□□ -2.43
SCARNA4-201ENST00000629045 CD3DP04234 171 aa-0.14□□□□□ -2.43
SCARNA4-201ENST00000629045 CST2P09228 141 aa-0.14□□□□□ -2.43
SCARNA4-201ENST00000629045 IDO1P14902 403 aa-0.14□□□□□ -2.43
SCARNA4-201ENST00000629045 INSL3P51460 131 aa-0.14□□□□□ -2.43
SCARNA4-201ENST00000629045 CAV3P56539 151 aa-0.14□□□□□ -2.43
SCARNA4-201ENST00000629045 AKIRIN2Q53H80 203 aa-0.14□□□□□ -2.43
SCARNA4-201ENST00000629045 LYG2Q86SG7 212 aa-0.14□□□□□ -2.43
SCARNA4-201ENST00000629045 MAP1LC3BQ9GZQ8 125 aa-0.14□□□□□ -2.43
SCARNA4-201ENST00000629045 ARL2BPQ9Y2Y0 163 aa-0.14□□□□□ -2.43
SCARNA4-201ENST00000629045 PLXNA4Q9HCM2 1894 aa-0.14□□□□□ -2.43
SCARNA4-201ENST00000629045 MYH7BA7E2Y1 1941 aa-0.15□□□□□ -2.43
SCARNA4-201ENST00000629045 MGAMO43451 1857 aa-0.15□□□□□ -2.43
SCARNA4-201ENST00000629045 ODAMA1E959 279 aa-0.15□□□□□ -2.43
SCARNA4-201ENST00000629045 K7ERJ3 54 aa-0.15□□□□□ -2.43
SCARNA4-201ENST00000629045 AIPO00170 330 aa-0.15□□□□□ -2.43
SCARNA4-201ENST00000629045 HIST1H2BKO60814 126 aa-0.15□□□□□ -2.43
SCARNA4-201ENST00000629045 IFNA14P01570 189 aa-0.15□□□□□ -2.43
SCARNA4-201ENST00000629045 TRGC2P03986 189 aa-0.15□□□□□ -2.43
SCARNA4-201ENST00000629045 HIST1H2BJP06899 126 aa-0.15□□□□□ -2.43
SCARNA4-201ENST00000629045 ERVS71-1P61550 626 aa-0.15□□□□□ -2.43
SCARNA4-201ENST00000629045 DIAPH2-AS1Q14236 149 aa-0.15□□□□□ -2.43
SCARNA4-201ENST00000629045 MSMO1Q15800 293 aa-0.15□□□□□ -2.43
SCARNA4-201ENST00000629045 VMA21Q3ZAQ7 101 aa-0.15□□□□□ -2.43
SCARNA4-201ENST00000629045 SCGB2B2Q4G0G5 96 aa-0.15□□□□□ -2.43
SCARNA4-201ENST00000629045 C5orf17Q8NAS9 161 aa-0.15□□□□□ -2.43
SCARNA4-201ENST00000629045 OR2J1Q9GZK6 312 aa-0.15□□□□□ -2.43
SCARNA4-201ENST00000629045 CST11Q9H112 138 aa-0.15□□□□□ -2.43
SCARNA4-201ENST00000629045 ASB4Q9Y574 426 aa-0.15□□□□□ -2.43
SCARNA4-201ENST00000629045 COL7A1Q02388 2944 aa-0.16□□□□□ -2.43
SCARNA4-201ENST00000629045 LRP1Q07954 4544 aaKnown RBP-0.16□□□□□ -2.43
SCARNA4-201ENST00000629045 PTPRFP10586 1907 aa-0.16□□□□□ -2.43
SCARNA4-201ENST00000629045 TRAV5A0A0B4J249 113 aa-0.16□□□□□ -2.44
SCARNA4-201ENST00000629045 PRORSD1PA6NEY8 169 aa-0.16□□□□□ -2.44
SCARNA4-201ENST00000629045 A6NN06 94 aa-0.16□□□□□ -2.44
SCARNA4-201ENST00000629045 G3V2T6 193 aa-0.16□□□□□ -2.44
SCARNA4-201ENST00000629045 GNG5P63218 68 aa-0.16□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms