RNA–Protein interactions for RNA: ENST00000624354.3

VCL-207, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 3,307 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-207ENST00000624354 KIR3DS1Q14943 382 aa6.97□□□□□ -1.29
VCL-207ENST00000624354 RAB37Q96AX2 223 aa6.97□□□□□ -1.29
VCL-207ENST00000624354 FMC1Q96HJ9 113 aa6.97□□□□□ -1.29
VCL-207ENST00000624354 CRYBG3Q68DQ2 2970 aa6.96□□□□□ -1.29
VCL-207ENST00000624354 C22orf46C9J442 243 aa6.96□□□□□ -1.29
VCL-207ENST00000624354 IGLV2-23P01705 113 aa6.96□□□□□ -1.29
VCL-207ENST00000624354 CKS1BP61024 79 aa6.96□□□□□ -1.29
VCL-207ENST00000624354 FOXE3Q13461 319 aa6.96□□□□□ -1.29
VCL-207ENST00000624354 PGLYRP4Q96LB8 373 aa6.96□□□□□ -1.29
VCL-207ENST00000624354 PRSS22Q9GZN4 317 aa6.96□□□□□ -1.29
VCL-207ENST00000624354 HSPB8Q9UJY1 196 aa6.96□□□□□ -1.29
VCL-207ENST00000624354 HILPDAQ9Y5L2 63 aa6.96□□□□□ -1.29
VCL-207ENST00000624354 TEX48A0A1B0GUV7 120 aa6.96□□□□□ -1.3
VCL-207ENST00000624354 MC5RP33032 325 aa6.96□□□□□ -1.3
VCL-207ENST00000624354 HCP5Q6MZN7 132 aa6.96□□□□□ -1.3
VCL-207ENST00000624354 TRGV9Q99603 122 aa6.96□□□□□ -1.3
VCL-207ENST00000624354 TANC2Q9HCD6 1990 aa6.96□□□□□ -1.3
VCL-207ENST00000624354 C17orf100A8MU93 164 aa6.96□□□□□ -1.3
VCL-207ENST00000624354 NDUFB3O43676 98 aa6.96□□□□□ -1.3
VCL-207ENST00000624354 LINC00322Q6ZN03 302 aaPredicted RBP6.96□□□□□ -1.3
VCL-207ENST00000624354 RBPMS2Q6ZRY4 209 aaKnown RBP6.96□□□□□ -1.3
VCL-207ENST00000624354 C22orf34Q6ZV56 151 aa6.96□□□□□ -1.3
VCL-207ENST00000624354 LINC00311Q8N616 119 aa6.96□□□□□ -1.3
VCL-207ENST00000624354 NUP37Q8NFH4 326 aa6.96□□□□□ -1.3
VCL-207ENST00000624354 ZNF492Q9P255 531 aa6.96□□□□□ -1.3
VCL-207ENST00000624354 LRRK2Q5S007 2527 aa6.96□□□□□ -1.3
VCL-207ENST00000624354 FASNP49327 2511 aaKnown RBP6.95□□□□□ -1.3
VCL-207ENST00000624354 CFAP46Q8IYW2 2715 aa6.95□□□□□ -1.3
VCL-207ENST00000624354 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.95□□□□□ -1.3
VCL-207ENST00000624354 A0A1W2PPM0 123 aa6.95□□□□□ -1.3
VCL-207ENST00000624354 CHEK1O14757 476 aa6.95□□□□□ -1.3
VCL-207ENST00000624354 ENSAO43768 121 aaKnown RBP6.95□□□□□ -1.3
VCL-207ENST00000624354 LTAP01374 205 aa6.95□□□□□ -1.3
VCL-207ENST00000624354 TCRAP04437 139 aa6.95□□□□□ -1.3
VCL-207ENST00000624354 FABP2P12104 132 aa6.95□□□□□ -1.3
VCL-207ENST00000624354 PIP4P1Q86T03 277 aa6.95□□□□□ -1.3
VCL-207ENST00000624354 GTSF1Q8WW33 167 aa6.95□□□□□ -1.3
VCL-207ENST00000624354 GFRA4Q9GZZ7 299 aa6.95□□□□□ -1.3
VCL-207ENST00000624354 Q9H3A6 140 aa6.95□□□□□ -1.3
VCL-207ENST00000624354 TPSG1Q9NRR2 321 aa6.95□□□□□ -1.3
VCL-207ENST00000624354 PTPN13Q12923 2485 aa6.95□□□□□ -1.3
VCL-207ENST00000624354 C19orf71A6NCJ1 209 aa6.95□□□□□ -1.3
VCL-207ENST00000624354 ZNF207O43670 478 aaKnown RBP6.95□□□□□ -1.3
VCL-207ENST00000624354 CRYGCP07315 174 aa6.95□□□□□ -1.3
VCL-207ENST00000624354 CEACAM3P40198 252 aa6.95□□□□□ -1.3
VCL-207ENST00000624354 CD300EQ496F6 205 aaPredicted RBP6.95□□□□□ -1.3
VCL-207ENST00000624354 C8orf31Q8N9H6 132 aa6.95□□□□□ -1.3
VCL-207ENST00000624354 ZNF48Q96MX3 618 aaPredicted RBP6.95□□□□□ -1.3
VCL-207ENST00000624354 TSSC4Q9Y5U2 329 aaPredicted RBP6.95□□□□□ -1.3
VCL-207ENST00000624354 TRAV26-1A0A087WT03 109 aa6.94□□□□□ -1.3
VCL-207ENST00000624354 GAGE12HA6NDE8 117 aa6.94□□□□□ -1.3
VCL-207ENST00000624354 H3BTX0 84 aa6.94□□□□□ -1.3
VCL-207ENST00000624354 FAM87AP0C7U9 286 aa6.94□□□□□ -1.3
VCL-207ENST00000624354 CD24P25063 80 aa6.94□□□□□ -1.3
VCL-207ENST00000624354 COL8A1P27658 744 aa6.94□□□□□ -1.3
VCL-207ENST00000624354 ZNF137PP52743 207 aa6.94□□□□□ -1.3
VCL-207ENST00000624354 FA2HQ7L5A8 372 aa6.94□□□□□ -1.3
VCL-207ENST00000624354 TMEM116Q8NCL8 245 aa6.94□□□□□ -1.3
VCL-207ENST00000624354 CCL17Q92583 94 aa6.94□□□□□ -1.3
VCL-207ENST00000624354 RABAC1Q9UI14 185 aa6.94□□□□□ -1.3
VCL-207ENST00000624354 POLQO75417 2590 aa6.94□□□□□ -1.3
VCL-207ENST00000624354 CEACAM4O75871 244 aa6.94□□□□□ -1.3
VCL-207ENST00000624354 GP9P14770 177 aa6.94□□□□□ -1.3
VCL-207ENST00000624354 NBL1P41271 181 aa6.94□□□□□ -1.3
VCL-207ENST00000624354 RPL27AP46776 148 aaKnown RBP6.94□□□□□ -1.3
VCL-207ENST00000624354 CRYBA4P53673 196 aa6.94□□□□□ -1.3
VCL-207ENST00000624354 LINC01545Q5VT33 79 aa6.94□□□□□ -1.3
VCL-207ENST00000624354 C8orf46Q8TAG6 207 aa6.94□□□□□ -1.3
VCL-207ENST00000624354 HIVEP3Q5T1R4 2406 aa6.94□□□□□ -1.3
VCL-207ENST00000624354 IGHV3-21A0A0B4J1V1 117 aa6.94□□□□□ -1.3
VCL-207ENST00000624354 IGHV3-72A0A0B4J1Y9 119 aa6.94□□□□□ -1.3
VCL-207ENST00000624354 J3QR89 54 aa6.94□□□□□ -1.3
VCL-207ENST00000624354 RUSC1-AS1Q66K80 236 aa6.94□□□□□ -1.3
VCL-207ENST00000624354 RITA1Q96K30 269 aa6.94□□□□□ -1.3
VCL-207ENST00000624354 DYSFO75923 2080 aa6.94□□□□□ -1.3
VCL-207ENST00000624354 RAI1Q7Z5J4 1906 aaPredicted RBP6.93□□□□□ -1.3
VCL-207ENST00000624354 TMEM178BH3BS89 294 aa6.93□□□□□ -1.3
VCL-207ENST00000624354 FCN3O75636 299 aa6.93□□□□□ -1.3
VCL-207ENST00000624354 APELAP0DMC3 54 aa6.93□□□□□ -1.3
VCL-207ENST00000624354 ADIPOQQ15848 244 aa6.93□□□□□ -1.3
VCL-207ENST00000624354 TEX45Q8NA69 505 aa6.93□□□□□ -1.3
VCL-207ENST00000624354 NDFIP1Q9BT67 221 aa6.93□□□□□ -1.3
VCL-207ENST00000624354 HIGD1AQ9Y241 93 aa6.93□□□□□ -1.3
VCL-207ENST00000624354 CFAP161Q6P656 301 aa6.93□□□□□ -1.3
VCL-207ENST00000624354 LYPD2Q6UXB3 125 aa6.93□□□□□ -1.3
VCL-207ENST00000624354 IGSF10Q6WRI0 2623 aa6.93□□□□□ -1.3
VCL-207ENST00000624354 ZNF462Q96JM2 2506 aa6.93□□□□□ -1.3
VCL-207ENST00000624354 A1L4Q6 167 aa6.93□□□□□ -1.3
VCL-207ENST00000624354 TMEM189A5PLL7 270 aa6.93□□□□□ -1.3
VCL-207ENST00000624354 PVRIGQ6DKI7 326 aa6.93□□□□□ -1.3
VCL-207ENST00000624354 OTORQ9NRC9 128 aa6.93□□□□□ -1.3
VCL-207ENST00000624354 NAV3Q8IVL0 2385 aa6.92□□□□□ -1.3
VCL-207ENST00000624354 TRAV8-1A0A0A6YYK1 113 aa6.92□□□□□ -1.3
VCL-207ENST00000624354 NPIPB6E9PJ23 425 aa6.92□□□□□ -1.3
VCL-207ENST00000624354 ZNF138P52744 262 aa6.92□□□□□ -1.3
VCL-207ENST00000624354 LYZP61626 148 aa6.92□□□□□ -1.3
VCL-207ENST00000624354 MRGPRG-AS1Q2M3A8 158 aa6.92□□□□□ -1.3
VCL-207ENST00000624354 SAMD5Q5TGI4 173 aa6.92□□□□□ -1.3
VCL-207ENST00000624354 Q86TA4 180 aa6.92□□□□□ -1.3
VCL-207ENST00000624354 CHD6Q8TD26 2715 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 149.2 ms