RNA–Protein interactions for RNA: ENST00000618939.4

CNOT3-210, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 4,516 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-210ENST00000618939 SMIM27A0A1W2PRY6 76 aa11.14□□□□□ -0.63
CNOT3-210ENST00000618939 TSPOP30536 169 aa11.14□□□□□ -0.63
CNOT3-210ENST00000618939 CT83Q5H943 113 aa11.14□□□□□ -0.63
CNOT3-210ENST00000618939 F2Z2F3 143 aa11.14□□□□□ -0.63
CNOT3-210ENST00000618939 SH2D1AO60880 128 aa11.14□□□□□ -0.63
CNOT3-210ENST00000618939 P0C879 139 aa11.14□□□□□ -0.63
CNOT3-210ENST00000618939 TRAV40A0A0B4J280 105 aa11.14□□□□□ -0.63
CNOT3-210ENST00000618939 SYS1-DBNDD2H3BUS1 97 aa11.14□□□□□ -0.63
CNOT3-210ENST00000618939 NCR2O95944 276 aa11.14□□□□□ -0.63
CNOT3-210ENST00000618939 SSBP2P81877 361 aaPredicted RBP11.14□□□□□ -0.63
CNOT3-210ENST00000618939 PAX8Q06710 450 aa11.14□□□□□ -0.63
CNOT3-210ENST00000618939 IGFL4Q6B9Z1 124 aa11.13□□□□□ -0.63
CNOT3-210ENST00000618939 TMEM219Q86XT9 240 aa11.13□□□□□ -0.63
CNOT3-210ENST00000618939 SPG11Q96JI7 2443 aa11.13□□□□□ -0.63
CNOT3-210ENST00000618939 SH2D7A6NKC9 451 aaPredicted RBP11.13□□□□□ -0.63
CNOT3-210ENST00000618939 ARMS2P0C7Q2 107 aa11.13□□□□□ -0.63
CNOT3-210ENST00000618939 PDE6HQ13956 83 aa11.13□□□□□ -0.63
CNOT3-210ENST00000618939 ZNF124Q15973 351 aa11.13□□□□□ -0.63
CNOT3-210ENST00000618939 SNHG12Q9BXW3 62 aa11.13□□□□□ -0.63
CNOT3-210ENST00000618939 TRAV41A0A0B4J266 112 aa11.13□□□□□ -0.63
CNOT3-210ENST00000618939 FAM231BA6NCW3 169 aa11.13□□□□□ -0.63
CNOT3-210ENST00000618939 EVI2AP22794 236 aa11.13□□□□□ -0.63
CNOT3-210ENST00000618939 ZNF56Q15929 161 aa11.13□□□□□ -0.63
CNOT3-210ENST00000618939 FBLN7Q53RD9 439 aa11.13□□□□□ -0.63
CNOT3-210ENST00000618939 SCGB3A1Q96QR1 104 aa11.13□□□□□ -0.63
CNOT3-210ENST00000618939 MS4A6AQ9H2W1 248 aa11.13□□□□□ -0.63
CNOT3-210ENST00000618939 hDV102S1A0JD36 115 aa11.12□□□□□ -0.63
CNOT3-210ENST00000618939 TRBV19A0A075B6N1 114 aa11.12□□□□□ -0.63
CNOT3-210ENST00000618939 DLEU1O43261 78 aa11.12□□□□□ -0.63
CNOT3-210ENST00000618939 PPP1R17O96001 155 aa11.12□□□□□ -0.63
CNOT3-210ENST00000618939 TDGF1P3P51864 188 aa11.12□□□□□ -0.63
CNOT3-210ENST00000618939 ASPHD1Q5U4P2 390 aa11.12□□□□□ -0.63
CNOT3-210ENST00000618939 ARFGEF3Q5TH69 2177 aa11.12□□□□□ -0.63
CNOT3-210ENST00000618939 IGLC7A0M8Q6 106 aa11.12□□□□□ -0.63
CNOT3-210ENST00000618939 IGLC1P0CG04 106 aa11.12□□□□□ -0.63
CNOT3-210ENST00000618939 SMIM13P0DJ93 91 aa11.12□□□□□ -0.63
CNOT3-210ENST00000618939 RNASE4P34096 147 aaKnown RBP11.12□□□□□ -0.63
CNOT3-210ENST00000618939 PLP1P60201 277 aa11.12□□□□□ -0.63
CNOT3-210ENST00000618939 MRPL52Q86TS9 123 aaKnown RBP11.12□□□□□ -0.63
CNOT3-210ENST00000618939 DMRTC2Q8IXT2 367 aaPredicted RBP11.12□□□□□ -0.63
CNOT3-210ENST00000618939 MOB4Q9Y3A3 225 aa11.12□□□□□ -0.63
CNOT3-210ENST00000618939 C8orf31Q8N9H6 132 aa11.12□□□□□ -0.63
CNOT3-210ENST00000618939 GLMPQ8WWB7 406 aa11.12□□□□□ -0.63
CNOT3-210ENST00000618939 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.11□□□□□ -0.63
CNOT3-210ENST00000618939 IGF2-ASQ6U949 168 aa11.11□□□□□ -0.63
CNOT3-210ENST00000618939 PROP1O75360 226 aa11.11□□□□□ -0.63
CNOT3-210ENST00000618939 BRWD1-AS2P59051 145 aa11.11□□□□□ -0.63
CNOT3-210ENST00000618939 TRAV21A0A0B4J279 112 aa11.11□□□□□ -0.63
CNOT3-210ENST00000618939 SIGLEC15Q6ZMC9 328 aa11.11□□□□□ -0.63
CNOT3-210ENST00000618939 AMN1Q8IY45 258 aa11.11□□□□□ -0.63
CNOT3-210ENST00000618939 TTC9CQ8N5M4 171 aa11.11□□□□□ -0.63
CNOT3-210ENST00000618939 KMT2EQ8IZD2 1858 aa11.11□□□□□ -0.63
CNOT3-210ENST00000618939 EML5Q05BV3 1969 aa11.11□□□□□ -0.63
CNOT3-210ENST00000618939 LOC107984156A0A0G2JMH3 177 aa11.1□□□□□ -0.63
CNOT3-210ENST00000618939 ARL17AQ8IVW1 177 aa11.1□□□□□ -0.63
CNOT3-210ENST00000618939 ALKBH7Q9BT30 221 aaPredicted RBP11.1□□□□□ -0.63
CNOT3-210ENST00000618939 MSRB2Q9Y3D2 182 aa11.1□□□□□ -0.63
CNOT3-210ENST00000618939 DOPEY2Q9Y3R5 2298 aa11.1□□□□□ -0.63
CNOT3-210ENST00000618939 CR1LQ2VPA4 569 aa11.1□□□□□ -0.63
CNOT3-210ENST00000618939 TMEM75Q8N9X5 138 aa11.1□□□□□ -0.63
CNOT3-210ENST00000618939 SHISA9B4DS77 424 aa11.1□□□□□ -0.63
CNOT3-210ENST00000618939 NDUFB8O95169 186 aa11.1□□□□□ -0.63
CNOT3-210ENST00000618939 H3BVH4 76 aa11.09□□□□□ -0.63
CNOT3-210ENST00000618939 NPFFO15130 113 aa11.09□□□□□ -0.63
CNOT3-210ENST00000618939 PAX1P15863 534 aa11.09□□□□□ -0.63
CNOT3-210ENST00000618939 SAA4P35542 130 aa11.09□□□□□ -0.63
CNOT3-210ENST00000618939 MCRIP2Q9BUT9 160 aaKnown RBP11.09□□□□□ -0.63
CNOT3-210ENST00000618939 TMEM14CQ9P0S9 112 aa11.09□□□□□ -0.63
CNOT3-210ENST00000618939 NPIPB6E9PJ23 425 aa11.09□□□□□ -0.63
CNOT3-210ENST00000618939 BPESC1Q9GZL8 116 aa11.09□□□□□ -0.63
CNOT3-210ENST00000618939 PLA2G5P39877 138 aa11.09□□□□□ -0.63
CNOT3-210ENST00000618939 FXYD7P58549 80 aa11.09□□□□□ -0.63
CNOT3-210ENST00000618939 GUSBP1Q15486 140 aa11.09□□□□□ -0.63
CNOT3-210ENST00000618939 RCHY1Q96PM5 261 aa11.09□□□□□ -0.63
CNOT3-210ENST00000618939 NPFFR1Q9GZQ6 430 aa11.09□□□□□ -0.63
CNOT3-210ENST00000618939 DPM2O94777 84 aa11.08□□□□□ -0.64
CNOT3-210ENST00000618939 MORN5Q5VZ52 161 aa11.08□□□□□ -0.64
CNOT3-210ENST00000618939 BRD3OSQ6XYD6 125 aa11.08□□□□□ -0.64
CNOT3-210ENST00000618939 OR4X2Q8NGF9 303 aa11.08□□□□□ -0.64
CNOT3-210ENST00000618939 CIDEAO60543 219 aa11.08□□□□□ -0.64
CNOT3-210ENST00000618939 NDUFA3O95167 84 aa11.08□□□□□ -0.64
CNOT3-210ENST00000618939 NDPQ00604 133 aa11.08□□□□□ -0.64
CNOT3-210ENST00000618939 SRSF1Q07955 248 aaKnown RBP eCLIP11.08□□□□□ -0.64
CNOT3-210ENST00000618939 MPV17L2Q567V2 206 aa11.08□□□□□ -0.64
CNOT3-210ENST00000618939 DUX5Q96PT3 197 aa11.08□□□□□ -0.64
CNOT3-210ENST00000618939 IGKV1OR2-108A0A075B7D4 117 aa11.07□□□□□ -0.64
CNOT3-210ENST00000618939 TGFAP01135 160 aa11.07□□□□□ -0.64
CNOT3-210ENST00000618939 TRBV7-1A0A0A6YYK4 115 aa11.07□□□□□ -0.64
CNOT3-210ENST00000618939 H3BRN7 92 aa11.07□□□□□ -0.64
CNOT3-210ENST00000618939 H3BUT2 72 aa11.07□□□□□ -0.64
CNOT3-210ENST00000618939 OVOL1O14753 267 aa11.07□□□□□ -0.64
CNOT3-210ENST00000618939 LGALS3P17931 250 aaKnown RBP11.07□□□□□ -0.64
CNOT3-210ENST00000618939 PCP4P48539 62 aa11.07□□□□□ -0.64
CNOT3-210ENST00000618939 TMEM170BQ5T4T1 132 aa11.07□□□□□ -0.64
CNOT3-210ENST00000618939 C22orf46C9J442 243 aa11.07□□□□□ -0.64
CNOT3-210ENST00000618939 IGLC2P0DOY2 106 aa11.07□□□□□ -0.64
CNOT3-210ENST00000618939 IGLC3P0DOY3 106 aa11.07□□□□□ -0.64
CNOT3-210ENST00000618939 IFI27P40305 119 aaPredicted RBP11.07□□□□□ -0.64
CNOT3-210ENST00000618939 RPL13AP40429 203 aaKnown RBP11.07□□□□□ -0.64
CNOT3-210ENST00000618939 SAMD13Q5VXD3 122 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms