RNA–Protein interactions for RNA: ENST00000542866.2

KDM3B-209, Transcript of lysine demethylase 3B, humanhuman

TSL 2 BASIC

Gene KDM3B, Length 3,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-209ENST00000542866 THYN1Q9P016 225 aa4.26□□□□□ -1.73
KDM3B-209ENST00000542866 RABAC1Q9UI14 185 aa4.26□□□□□ -1.73
KDM3B-209ENST00000542866 TNFRSF18Q9Y5U5 241 aa4.26□□□□□ -1.73
KDM3B-209ENST00000542866 ANKHD1Q8IWZ3 2542 aaKnown RBP4.26□□□□□ -1.73
KDM3B-209ENST00000542866 A0A0G2JNJ9 132 aa4.26□□□□□ -1.73
KDM3B-209ENST00000542866 ENSAO43768 121 aaKnown RBP4.26□□□□□ -1.73
KDM3B-209ENST00000542866 CGB3P0DN86 165 aa4.26□□□□□ -1.73
KDM3B-209ENST00000542866 CGB7P0DN87 165 aa4.26□□□□□ -1.73
KDM3B-209ENST00000542866 SCGB1A1P11684 91 aa4.26□□□□□ -1.73
KDM3B-209ENST00000542866 ATP5IP56385 69 aaPredicted RBP4.26□□□□□ -1.73
KDM3B-209ENST00000542866 SEC11AP67812 179 aa4.26□□□□□ -1.73
KDM3B-209ENST00000542866 TIMM23BQ5SRD1 257 aa4.26□□□□□ -1.73
KDM3B-209ENST00000542866 GOLT1AQ6ZVE7 132 aa4.26□□□□□ -1.73
KDM3B-209ENST00000542866 RPRMLQ8N4K4 120 aa4.26□□□□□ -1.73
KDM3B-209ENST00000542866 C5orf17Q8NAS9 161 aa4.26□□□□□ -1.73
KDM3B-209ENST00000542866 OR2K2Q8NGT1 345 aa4.26□□□□□ -1.73
KDM3B-209ENST00000542866 OR10AG1Q8NH19 301 aa4.26□□□□□ -1.73
KDM3B-209ENST00000542866 NEU4Q8WWR8 484 aaPredicted RBP4.26□□□□□ -1.73
KDM3B-209ENST00000542866 Q9UFV3 132 aa4.26□□□□□ -1.73
KDM3B-209ENST00000542866 F11RQ9Y624 299 aaKnown RBP4.26□□□□□ -1.73
KDM3B-209ENST00000542866 SOX21Q9Y651 276 aaPredicted RBP4.26□□□□□ -1.73
KDM3B-209ENST00000542866 A0A0G2JLM5 398 aa4.25□□□□□ -1.73
KDM3B-209ENST00000542866 FBLL1A6NHQ2 334 aaKnown RBP4.25□□□□□ -1.73
KDM3B-209ENST00000542866 C9orf118A6NHY6 69 aa4.25□□□□□ -1.73
KDM3B-209ENST00000542866 TCRAP04437 139 aa4.25□□□□□ -1.73
KDM3B-209ENST00000542866 ARMS2P0C7Q2 107 aa4.25□□□□□ -1.73
KDM3B-209ENST00000542866 NMUP48645 174 aa4.25□□□□□ -1.73
KDM3B-209ENST00000542866 KIR3DS1Q14943 382 aa4.25□□□□□ -1.73
KDM3B-209ENST00000542866 PSG3Q16557 428 aa4.25□□□□□ -1.73
KDM3B-209ENST00000542866 LINC01545Q5VT33 79 aa4.25□□□□□ -1.73
KDM3B-209ENST00000542866 SAMD13Q5VXD3 122 aa4.25□□□□□ -1.73
KDM3B-209ENST00000542866 Q71RC1 249 aaPredicted RBP4.25□□□□□ -1.73
KDM3B-209ENST00000542866 OR1N2Q8NGR9 330 aa4.25□□□□□ -1.73
KDM3B-209ENST00000542866 RNASE6Q93091 150 aaKnown RBP4.25□□□□□ -1.73
KDM3B-209ENST00000542866 FMC1Q96HJ9 113 aa4.25□□□□□ -1.73
KDM3B-209ENST00000542866 JMJD8Q96S16 334 aa4.25□□□□□ -1.73
KDM3B-209ENST00000542866 ZNF747Q9BV97 191 aa4.25□□□□□ -1.73
KDM3B-209ENST00000542866 PRSS22Q9GZN4 317 aa4.25□□□□□ -1.73
KDM3B-209ENST00000542866 TLN2Q9Y4G6 2542 aa4.25□□□□□ -1.73
KDM3B-209ENST00000542866 IGKV1D-37A0A075B6S9 117 aa4.25□□□□□ -1.73
KDM3B-209ENST00000542866 TMSB15BA0A087X1C1 80 aa4.25□□□□□ -1.73
KDM3B-209ENST00000542866 A1L4Q6 167 aa4.25□□□□□ -1.73
KDM3B-209ENST00000542866 FAM106CPP0CH98 169 aa4.25□□□□□ -1.73
KDM3B-209ENST00000542866 PLP1P60201 277 aa4.25□□□□□ -1.73
KDM3B-209ENST00000542866 FAM106AQ4KMX7 169 aa4.25□□□□□ -1.73
KDM3B-209ENST00000542866 MBNL2Q5VZF2 373 aaKnown RBP4.25□□□□□ -1.73
KDM3B-209ENST00000542866 WFDC3Q8IUB2 231 aa4.25□□□□□ -1.73
KDM3B-209ENST00000542866 EXOC3-AS1Q8N2X6 119 aa4.25□□□□□ -1.73
KDM3B-209ENST00000542866 MLST8Q9BVC4 326 aa4.25□□□□□ -1.73
KDM3B-209ENST00000542866 FAM215AQ9Y5M1 114 aa4.25□□□□□ -1.73
KDM3B-209ENST00000542866 SPCS1Q9Y6A9 102 aa4.25□□□□□ -1.73
KDM3B-209ENST00000542866 PLXNB1O43157 2135 aa4.25□□□□□ -1.73
KDM3B-209ENST00000542866 IGHV3-72A0A0B4J1Y9 119 aa4.25□□□□□ -1.73
KDM3B-209ENST00000542866 A0A1B0GUT8 65 aa4.25□□□□□ -1.73
KDM3B-209ENST00000542866 C19orf71A6NCJ1 209 aa4.25□□□□□ -1.73
KDM3B-209ENST00000542866 H3BRM9 83 aa4.25□□□□□ -1.73
KDM3B-209ENST00000542866 GNG7O60262 68 aa4.25□□□□□ -1.73
KDM3B-209ENST00000542866 COX6B1P14854 86 aa4.25□□□□□ -1.73
KDM3B-209ENST00000542866 CCL3L1P16619 93 aa4.25□□□□□ -1.73
KDM3B-209ENST00000542866 MYCNOSP40205 109 aa4.25□□□□□ -1.73
KDM3B-209ENST00000542866 IFI27P40305 119 aaPredicted RBP4.25□□□□□ -1.73
KDM3B-209ENST00000542866 RAB9AP51151 201 aa4.25□□□□□ -1.73
KDM3B-209ENST00000542866 LYZP61626 148 aa4.25□□□□□ -1.73
KDM3B-209ENST00000542866 CACNG7P62955 275 aa4.25□□□□□ -1.73
KDM3B-209ENST00000542866 RIGQ13278 110 aa4.25□□□□□ -1.73
KDM3B-209ENST00000542866 RUSC1-AS1Q66K80 236 aa4.25□□□□□ -1.73
KDM3B-209ENST00000542866 SLC25A48Q6ZT89 311 aaKnown RBP4.25□□□□□ -1.73
KDM3B-209ENST00000542866 OR10X1Q8NGY0 326 aa4.25□□□□□ -1.73
KDM3B-209ENST00000542866 OSR1Q8TAX0 266 aaPredicted RBP4.25□□□□□ -1.73
KDM3B-209ENST00000542866 FAM110AQ9BQ89 295 aa4.25□□□□□ -1.73
KDM3B-209ENST00000542866 RNF7Q9UBF6 113 aa4.25□□□□□ -1.73
KDM3B-209ENST00000542866 RPUSD1Q9UJJ7 312 aaKnown RBP4.25□□□□□ -1.73
KDM3B-209ENST00000542866 HECTD1Q9ULT8 2610 aa4.24□□□□□ -1.73
KDM3B-209ENST00000542866 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.24□□□□□ -1.732e-7■■■■■ 31.2
KDM3B-209ENST00000542866 CENPEQ02224 2701 aa4.24□□□□□ -1.73
KDM3B-209ENST00000542866 G3V4G9 280 aa4.24□□□□□ -1.73
KDM3B-209ENST00000542866 K7EP34 96 aa4.24□□□□□ -1.73
KDM3B-209ENST00000542866 SIVA1O15304 175 aa4.24□□□□□ -1.73
KDM3B-209ENST00000542866 LTAP01374 205 aa4.24□□□□□ -1.73
KDM3B-209ENST00000542866 CFHR2P36980 270 aa4.24□□□□□ -1.73
KDM3B-209ENST00000542866 LOXL1Q08397 574 aaPredicted RBP4.24□□□□□ -1.73
KDM3B-209ENST00000542866 DIAPH2-AS1Q14236 149 aa4.24□□□□□ -1.73
KDM3B-209ENST00000542866 LINC01560Q8TB33 94 aa4.24□□□□□ -1.73
KDM3B-209ENST00000542866 TMEM186Q96B77 213 aa4.24□□□□□ -1.73
KDM3B-209ENST00000542866 JKAMPQ9P055 326 aa4.24□□□□□ -1.73
KDM3B-209ENST00000542866 KLF12Q9Y4X4 402 aa4.24□□□□□ -1.73
KDM3B-209ENST00000542866 USP9XQ93008 2570 aaPredicted RBP4.24□□□□□ -1.73
KDM3B-209ENST00000542866 TANC2Q9HCD6 1990 aa4.24□□□□□ -1.73
KDM3B-209ENST00000542866 PPIAL4EA0A075B759 164 aa4.24□□□□□ -1.73
KDM3B-209ENST00000542866 PPIAL4CA0A0B4J2A2 164 aa4.24□□□□□ -1.73
KDM3B-209ENST00000542866 HAX1O00165 279 aa4.24□□□□□ -1.73
KDM3B-209ENST00000542866 PPIAL4FP0DN26 164 aa4.24□□□□□ -1.73
KDM3B-209ENST00000542866 PPIAL4GP0DN37 164 aa4.24□□□□□ -1.73
KDM3B-209ENST00000542866 TNFAIP6P98066 277 aaPredicted RBP4.24□□□□□ -1.73
KDM3B-209ENST00000542866 CT83Q5H943 113 aa4.24□□□□□ -1.73
KDM3B-209ENST00000542866 OR5AN1Q8NGI8 311 aa4.24□□□□□ -1.73
KDM3B-209ENST00000542866 GFRA4Q9GZZ7 299 aa4.24□□□□□ -1.73
KDM3B-209ENST00000542866 ZNF492Q9P255 531 aa4.24□□□□□ -1.73
KDM3B-209ENST00000542866 UNC79Q9P2D8 2635 aa4.24□□□□□ -1.73
KDM3B-209ENST00000542866 A0A1W2PRD5 423 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms