RNA–Protein interactions for RNA: ENST00000534112.1

SSH3-211, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 544 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-211ENST00000534112 TIMM8BQ9Y5J9 83 aaPredicted RBP14.85□□□□□ -0.03
SSH3-211ENST00000534112 UPK1BO75841 260 aa14.84□□□□□ -0.03
SSH3-211ENST00000534112 RHOBP62745 196 aa14.84□□□□□ -0.03
SSH3-211ENST00000534112 HIST1H1AQ02539 215 aaPredicted RBP14.84□□□□□ -0.03
SSH3-211ENST00000534112 OR8A1Q8NGG7 326 aa14.84□□□□□ -0.03
SSH3-211ENST00000534112 C16orf74Q96GX8 76 aa14.84□□□□□ -0.03
SSH3-211ENST00000534112 FLVCR2Q9UPI3 526 aa14.84□□□□□ -0.03
SSH3-211ENST00000534112 H3BRN7 92 aa14.83□□□□□ -0.04
SSH3-211ENST00000534112 WRBO00258 174 aa14.83□□□□□ -0.04
SSH3-211ENST00000534112 SYNGR2O43760 224 aa14.83□□□□□ -0.04
SSH3-211ENST00000534112 UBE2MP61081 183 aaKnown RBP14.83□□□□□ -0.04
SSH3-211ENST00000534112 AKR1C1Q04828 323 aa14.83□□□□□ -0.04
SSH3-211ENST00000534112 PPP1R1AQ13522 171 aa14.83□□□□□ -0.04
SSH3-211ENST00000534112 LRTM2Q8N967 370 aa14.83□□□□□ -0.04
SSH3-211ENST00000534112 SHANK2-AS3Q9BTD1 123 aa14.83□□□□□ -0.04
SSH3-211ENST00000534112 NOP10Q9NPE3 64 aaKnown RBP14.83□□□□□ -0.04
SSH3-211ENST00000534112 PPP1R14DQ9NXH3 145 aa14.83□□□□□ -0.04
SSH3-211ENST00000534112 SFT2D2O95562 160 aa14.82□□□□□ -0.04
SSH3-211ENST00000534112 RPL7P18124 248 aaKnown RBP14.82□□□□□ -0.04
SSH3-211ENST00000534112 VAMP1P23763 118 aa14.82□□□□□ -0.04
SSH3-211ENST00000534112 ASAH1Q13510 395 aa14.82□□□□□ -0.04
SSH3-211ENST00000534112 SPANXN5Q5MJ07 72 aa14.82□□□□□ -0.04
SSH3-211ENST00000534112 TMEM144Q7Z5S9 345 aa14.82□□□□□ -0.04
SSH3-211ENST00000534112 KRTAP1-5Q9BYS1 174 aa14.82□□□□□ -0.04
SSH3-211ENST00000534112 CXCL3P19876 107 aa14.81□□□□□ -0.04
SSH3-211ENST00000534112 RAP2BP61225 183 aa14.81□□□□□ -0.04
SSH3-211ENST00000534112 IFITM3Q01628 133 aa14.81□□□□□ -0.04
SSH3-211ENST00000534112 ZNF493Q6ZR52 646 aa14.81□□□□□ -0.04
SSH3-211ENST00000534112 ACOT7LQ6ZUV0 252 aa14.81□□□□□ -0.04
SSH3-211ENST00000534112 HIGD1AQ9Y241 93 aa14.81□□□□□ -0.04
SSH3-211ENST00000534112 HYPMO75409 117 aa14.8□□□□□ -0.04
SSH3-211ENST00000534112 TCRBP04435 133 aa14.8□□□□□ -0.04
SSH3-211ENST00000534112 IL5P05113 134 aa14.8□□□□□ -0.04
SSH3-211ENST00000534112 KRTAP10-2P60368 255 aa14.8□□□□□ -0.04
SSH3-211ENST00000534112 OR5I1Q13606 314 aa14.8□□□□□ -0.04
SSH3-211ENST00000534112 PSG3Q16557 428 aa14.8□□□□□ -0.04
SSH3-211ENST00000534112 TTC32Q5I0X7 151 aa14.8□□□□□ -0.04
SSH3-211ENST00000534112 CYP2G1PQ6ZSU1 146 aa14.8□□□□□ -0.04
SSH3-211ENST00000534112 RNASE8Q8TDE3 154 aaKnown RBP14.8□□□□□ -0.04
SSH3-211ENST00000534112 GNPNAT1Q96EK6 184 aaPredicted RBP14.8□□□□□ -0.04
SSH3-211ENST00000534112 UHRF2Q96PU4 802 aa14.8□□□□□ -0.04
SSH3-211ENST00000534112 C20orf85Q9H1P6 137 aa14.8□□□□□ -0.04
SSH3-211ENST00000534112 TRAV26-1A0A087WT03 109 aa14.79□□□□□ -0.04
SSH3-211ENST00000534112 C9orf170A2RU37 121 aa14.79□□□□□ -0.04
SSH3-211ENST00000534112 H3BP45 60 aa14.79□□□□□ -0.04
SSH3-211ENST00000534112 PRB4P10163 310 aaPredicted RBP14.79□□□□□ -0.04
SSH3-211ENST00000534112 ANXA7P20073 488 aaKnown RBP14.79□□□□□ -0.04
SSH3-211ENST00000534112 MZT2BQ6NZ67 158 aa14.79□□□□□ -0.04
SSH3-211ENST00000534112 OR10J6PQ8NGY7 276 aa14.79□□□□□ -0.04
SSH3-211ENST00000534112 Q9H3A6 140 aa14.79□□□□□ -0.04
SSH3-211ENST00000534112 STRAPQ9Y3F4 350 aaKnown RBP14.79□□□□□ -0.04
SSH3-211ENST00000534112 A0A087X0K7 114 aa14.78□□□□□ -0.04
SSH3-211ENST00000534112 OR4E1P0C645 316 aa14.78□□□□□ -0.04
SSH3-211ENST00000534112 M6PRP20645 277 aa14.78□□□□□ -0.04
SSH3-211ENST00000534112 CDKN1BP46527 198 aa14.78□□□□□ -0.04
SSH3-211ENST00000534112 LRRC20Q8TCA0 184 aa14.78□□□□□ -0.04
SSH3-211ENST00000534112 RXFP4Q8TDU9 374 aa14.78□□□□□ -0.04
SSH3-211ENST00000534112 TMEM263Q8WUH6 116 aaKnown RBP14.78□□□□□ -0.04
SSH3-211ENST00000534112 ZNF503Q96F45 646 aa14.78□□□□□ -0.04
SSH3-211ENST00000534112 FAM240BA0A1B0GVZ2 78 aa14.77□□□□□ -0.05
SSH3-211ENST00000534112 SMCO3A2RU48 225 aa14.77□□□□□ -0.05
SSH3-211ENST00000534112 H7BYZ3 331 aa14.77□□□□□ -0.05
SSH3-211ENST00000534112 HOXB5P09067 269 aa14.77□□□□□ -0.05
SSH3-211ENST00000534112 OR5G3P0C626 314 aa14.77□□□□□ -0.05
SSH3-211ENST00000534112 BTF3P20290 206 aaKnown RBP14.77□□□□□ -0.05
SSH3-211ENST00000534112 PLP1P60201 277 aa14.77□□□□□ -0.05
SSH3-211ENST00000534112 RPUSD4Q96CM3 377 aaKnown RBP14.77□□□□□ -0.05
SSH3-211ENST00000534112 NUDT15Q9NV35 164 aa14.77□□□□□ -0.05
SSH3-211ENST00000534112 A0A0J9YY99 117 aa14.76□□□□□ -0.05
SSH3-211ENST00000534112 LINC00869P0C866 280 aa14.76□□□□□ -0.05
SSH3-211ENST00000534112 ESRGQ1W209 222 aa14.76□□□□□ -0.05
SSH3-211ENST00000534112 LINC00612Q8N6U2 182 aa14.76□□□□□ -0.05
SSH3-211ENST00000534112 UPK3BQ9BT76 320 aa14.76□□□□□ -0.05
SSH3-211ENST00000534112 TRAV6A0A075B6T7 132 aa14.75□□□□□ -0.05
SSH3-211ENST00000534112 A0A1W2PPQ1 181 aa14.75□□□□□ -0.05
SSH3-211ENST00000534112 SELENOTP62341 195 aa14.75□□□□□ -0.05
SSH3-211ENST00000534112 KIR3DS1Q14943 382 aa14.75□□□□□ -0.05
SSH3-211ENST00000534112 C4orf46Q504U0 113 aa14.75□□□□□ -0.05
SSH3-211ENST00000534112 ADAP1O75689 374 aa14.74□□□□□ -0.05
SSH3-211ENST00000534112 HOXA5P20719 270 aa14.74□□□□□ -0.05
SSH3-211ENST00000534112 DLK1P80370 383 aa14.74□□□□□ -0.05
SSH3-211ENST00000534112 ID3Q02535 119 aa14.74□□□□□ -0.05
SSH3-211ENST00000534112 S100A7AQ86SG5 101 aa14.74□□□□□ -0.05
SSH3-211ENST00000534112 PMS2P5A8MQ11 134 aa14.73□□□□□ -0.05
SSH3-211ENST00000534112 MRPS12O15235 138 aaKnown RBP14.73□□□□□ -0.05
SSH3-211ENST00000534112 H2AFB2P0C5Z0 115 aa14.73□□□□□ -0.05
SSH3-211ENST00000534112 POLR2GP62487 172 aaKnown RBP eCLIP14.73□□□□□ -0.05
SSH3-211ENST00000534112 PATE2Q6UY27 113 aa14.73□□□□□ -0.05
SSH3-211ENST00000534112 ENKURQ8TC29 256 aa14.73□□□□□ -0.05
SSH3-211ENST00000534112 C20orf144Q9BQM9 153 aa14.73□□□□□ -0.05
SSH3-211ENST00000534112 ARL6Q9H0F7 186 aa14.73□□□□□ -0.05
SSH3-211ENST00000534112 MRPS16Q9Y3D3 137 aaKnown RBP14.73□□□□□ -0.05
SSH3-211ENST00000534112 GAGE12BA1L429 117 aa14.72□□□□□ -0.05
SSH3-211ENST00000534112 GAGE7O76087 117 aa14.72□□□□□ -0.05
SSH3-211ENST00000534112 GAGE12FP0CL80 117 aa14.72□□□□□ -0.05
SSH3-211ENST00000534112 GAGE12GP0CL81 117 aa14.72□□□□□ -0.05
SSH3-211ENST00000534112 GAGE12IP0CL82 117 aa14.72□□□□□ -0.05
SSH3-211ENST00000534112 CCDC28AQ8IWP9 274 aa14.72□□□□□ -0.05
SSH3-211ENST00000534112 ZNF331Q9NQX6 463 aaPredicted RBP14.72□□□□□ -0.05
SSH3-211ENST00000534112 ZNF586Q9NXT0 402 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 144.1 ms