RNA–Protein interactions for RNA: ENST00000530339.1

PCDHA4-203, Transcript of protocadherin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA4, Length 5,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-203ENST00000530339 OCIAD2Q56VL3 154 aa12.53□□□□□ -0.4
PCDHA4-203ENST00000530339 GTSF1LQ9H1H1 148 aa12.53□□□□□ -0.4
PCDHA4-203ENST00000530339 CST9LQ9H4G1 147 aa12.53□□□□□ -0.4
PCDHA4-203ENST00000530339 ZNF492Q9P255 531 aa12.53□□□□□ -0.4
PCDHA4-203ENST00000530339 SPTBN2O15020 2390 aa12.53□□□□□ -0.4
PCDHA4-203ENST00000530339 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.53□□□□□ -0.4
PCDHA4-203ENST00000530339 CT83Q5H943 113 aa12.53□□□□□ -0.4
PCDHA4-203ENST00000530339 UBE2DNLQ8IWF7 75 aa12.53□□□□□ -0.4
PCDHA4-203ENST00000530339 DLX4Q92988 240 aaPredicted RBP12.53□□□□□ -0.4
PCDHA4-203ENST00000530339 LYNX1G3V0Z9 82 aa12.53□□□□□ -0.4
PCDHA4-203ENST00000530339 LYNX1P0DP58 116 aa12.53□□□□□ -0.4
PCDHA4-203ENST00000530339 AMN1Q8IY45 258 aa12.53□□□□□ -0.4
PCDHA4-203ENST00000530339 TOMM7Q9P0U1 55 aa12.53□□□□□ -0.4
PCDHA4-203ENST00000530339 RPL15P61313 204 aaKnown RBP12.53□□□□□ -0.4
PCDHA4-203ENST00000530339 FER1L5A0AVI2 2057 aa12.53□□□□□ -0.4
PCDHA4-203ENST00000530339 TMEM238C9JI98 176 aa12.53□□□□□ -0.4
PCDHA4-203ENST00000530339 NSUN5P1Q3KNT7 163 aa12.53□□□□□ -0.4
PCDHA4-203ENST00000530339 ZFAND6Q6FIF0 208 aa12.53□□□□□ -0.4
PCDHA4-203ENST00000530339 ZNF524Q96C55 264 aa12.53□□□□□ -0.4
PCDHA4-203ENST00000530339 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.52□□□□□ -0.4
PCDHA4-203ENST00000530339 MMP23AO75900 390 aa12.52□□□□□ -0.4
PCDHA4-203ENST00000530339 DTX1Q86Y01 620 aa12.52□□□□□ -0.4
PCDHA4-203ENST00000530339 WISP1O95388 367 aa12.52□□□□□ -0.41
PCDHA4-203ENST00000530339 IGKV1-16P04430 117 aa12.52□□□□□ -0.41
PCDHA4-203ENST00000530339 TDGF1P13385 188 aa12.52□□□□□ -0.41
PCDHA4-203ENST00000530339 C3orf56Q8N813 242 aa12.52□□□□□ -0.41
PCDHA4-203ENST00000530339 TMEM158Q8WZ71 300 aa12.52□□□□□ -0.41
PCDHA4-203ENST00000530339 CKS1BP61024 79 aa12.52□□□□□ -0.41
PCDHA4-203ENST00000530339 CHAC1Q9BUX1 264 aa12.52□□□□□ -0.41
PCDHA4-203ENST00000530339 V9GYV3 84 aa12.52□□□□□ -0.41
PCDHA4-203ENST00000530339 POLEQ07864 2286 aa12.52□□□□□ -0.41
PCDHA4-203ENST00000530339 CD28P10747 220 aa12.52□□□□□ -0.41
PCDHA4-203ENST00000530339 VGLL1Q99990 258 aa12.52□□□□□ -0.41
PCDHA4-203ENST00000530339 TMEM14BQ9NUH8 114 aa12.52□□□□□ -0.41
PCDHA4-203ENST00000530339 NCOR1O75376 2440 aa12.52□□□□□ -0.41
PCDHA4-203ENST00000530339 A0A0G2JNJ9 132 aa12.51□□□□□ -0.41
PCDHA4-203ENST00000530339 Q9UFV3 132 aa12.51□□□□□ -0.41
PCDHA4-203ENST00000530339 ARMS2P0C7Q2 107 aa12.51□□□□□ -0.41
PCDHA4-203ENST00000530339 Q8TAT8 98 aa12.51□□□□□ -0.41
PCDHA4-203ENST00000530339 DPH3P1Q9H4G8 78 aa12.51□□□□□ -0.41
PCDHA4-203ENST00000530339 HEATR1Q9H583 2144 aaKnown RBP12.51□□□□□ -0.41
PCDHA4-203ENST00000530339 PLEKHB2Q96CS7 222 aa12.51□□□□□ -0.41
PCDHA4-203ENST00000530339 TRAV12-3A0A0B4J271 114 aa12.5□□□□□ -0.41
PCDHA4-203ENST00000530339 SRD5A1P18405 259 aa12.5□□□□□ -0.41
PCDHA4-203ENST00000530339 FAM231DQ6ZW35 169 aa12.5□□□□□ -0.41
PCDHA4-203ENST00000530339 THADAQ6YHU6 1953 aa12.5□□□□□ -0.41
PCDHA4-203ENST00000530339 CRPP02741 224 aa12.5□□□□□ -0.41
PCDHA4-203ENST00000530339 J3QKU1 62 aa12.5□□□□□ -0.41
PCDHA4-203ENST00000530339 MORN3Q6PF18 240 aaPredicted RBP12.5□□□□□ -0.41
PCDHA4-203ENST00000530339 STPG4Q8N801 248 aa12.5□□□□□ -0.41
PCDHA4-203ENST00000530339 ATXN8Q156A1 80 aa12.5□□□□□ -0.41
PCDHA4-203ENST00000530339 ZNF114Q8NC26 417 aa12.5□□□□□ -0.41
PCDHA4-203ENST00000530339 SHANK2-AS3Q9BTD1 123 aa12.5□□□□□ -0.41
PCDHA4-203ENST00000530339 NDUFB8O95169 186 aa12.49□□□□□ -0.41
PCDHA4-203ENST00000530339 PRTN3P24158 256 aa12.49□□□□□ -0.41
PCDHA4-203ENST00000530339 TEX43Q6ZNM6 134 aa12.49□□□□□ -0.41
PCDHA4-203ENST00000530339 HAPLN4Q86UW8 402 aa12.49□□□□□ -0.41
PCDHA4-203ENST00000530339 M0R2P5 195 aa12.49□□□□□ -0.41
PCDHA4-203ENST00000530339 ADAMTSL5Q6ZMM2 481 aa12.49□□□□□ -0.41
PCDHA4-203ENST00000530339 NLRC5Q86WI3 1866 aa12.48□□□□□ -0.41
PCDHA4-203ENST00000530339 RSPO1Q2MKA7 263 aaPredicted RBP12.48□□□□□ -0.41
PCDHA4-203ENST00000530339 C11orf52Q96A22 123 aa12.48□□□□□ -0.41
PCDHA4-203ENST00000530339 SMKR1H3BMG3 65 aa12.48□□□□□ -0.41
PCDHA4-203ENST00000530339 IGLL1P15814 213 aa12.48□□□□□ -0.41
PCDHA4-203ENST00000530339 SLAQ13239 276 aa12.48□□□□□ -0.41
PCDHA4-203ENST00000530339 TMEM75Q8N9X5 138 aa12.48□□□□□ -0.41
PCDHA4-203ENST00000530339 PGPEP1Q9NXJ5 209 aa12.48□□□□□ -0.41
PCDHA4-203ENST00000530339 MGAMO43451 1857 aa12.48□□□□□ -0.41
PCDHA4-203ENST00000530339 IGKV3D-20A0A0C4DH25 116 aa12.48□□□□□ -0.41
PCDHA4-203ENST00000530339 GGTLC3B5MD39 225 aa12.48□□□□□ -0.41
PCDHA4-203ENST00000530339 VCYO14598 125 aa12.48□□□□□ -0.41
PCDHA4-203ENST00000530339 IGLV3-1P01715 115 aa12.48□□□□□ -0.41
PCDHA4-203ENST00000530339 GATA3P23771 443 aa12.48□□□□□ -0.41
PCDHA4-203ENST00000530339 DEFB121Q5J5C9 76 aa12.48□□□□□ -0.41
PCDHA4-203ENST00000530339 ZNF474Q6S9Z5 364 aaPredicted RBP12.48□□□□□ -0.41
PCDHA4-203ENST00000530339 PLXNA2O75051 1894 aa12.47□□□□□ -0.41
PCDHA4-203ENST00000530339 SAP30O75446 220 aa12.47□□□□□ -0.41
PCDHA4-203ENST00000530339 LINC00311Q8N616 119 aa12.47□□□□□ -0.41
PCDHA4-203ENST00000530339 LINC01356Q8N9X3 169 aa12.47□□□□□ -0.41
PCDHA4-203ENST00000530339 SMIM27A0A1W2PRY6 76 aa12.47□□□□□ -0.41
PCDHA4-203ENST00000530339 MALP21145 153 aa12.47□□□□□ -0.41
PCDHA4-203ENST00000530339 IGFL3Q6UXB1 125 aa12.47□□□□□ -0.41
PCDHA4-203ENST00000530339 LSM4Q9Y4Z0 139 aaKnown RBP12.47□□□□□ -0.41
PCDHA4-203ENST00000530339 DOPEY2Q9Y3R5 2298 aa12.47□□□□□ -0.41
PCDHA4-203ENST00000530339 DIDO1Q9BTC0 2240 aaKnown RBP12.47□□□□□ -0.41
PCDHA4-203ENST00000530339 TRGV4A0A0C4DH28 118 aa12.47□□□□□ -0.41
PCDHA4-203ENST00000530339 A0A1W2PPI3 338 aa12.47□□□□□ -0.41
PCDHA4-203ENST00000530339 SRSF6Q13247 344 aaKnown RBP12.47□□□□□ -0.41
PCDHA4-203ENST00000530339 IGHV3-64A0A075B6Q5 118 aa12.47□□□□□ -0.41
PCDHA4-203ENST00000530339 COA6Q5JTJ3 125 aaKnown RBP12.47□□□□□ -0.41
PCDHA4-203ENST00000530339 RNF166Q96A37 237 aaPredicted RBP12.47□□□□□ -0.41
PCDHA4-203ENST00000530339 PKDREJQ9NTG1 2253 aa12.47□□□□□ -0.41
PCDHA4-203ENST00000530339 CFHR2P36980 270 aa12.46□□□□□ -0.41
PCDHA4-203ENST00000530339 ZNF415Q09FC8 603 aa12.46□□□□□ -0.41
PCDHA4-203ENST00000530339 SLC25A20O43772 301 aa12.46□□□□□ -0.42
PCDHA4-203ENST00000530339 ZNF562Q6V9R5 426 aa12.46□□□□□ -0.42
PCDHA4-203ENST00000530339 ZNF833PQ6ZTB9 187 aa12.46□□□□□ -0.42
PCDHA4-203ENST00000530339 C9orf118A6NHY6 69 aa12.46□□□□□ -0.42
PCDHA4-203ENST00000530339 TNFRSF6BO95407 300 aa12.46□□□□□ -0.42
PCDHA4-203ENST00000530339 SP5Q6BEB4 398 aaPredicted RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms