RNA–Protein interactions for RNA: ENST00000521331.5

PRKDC-204, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-204ENST00000521331 SLC25A39Q9BZJ4 359 aaPredicted RBP10.42□□□□□ -0.74
PRKDC-204ENST00000521331 PPP1R14DQ9NXH3 145 aa10.42□□□□□ -0.74
PRKDC-204ENST00000521331 LINC00588Q9Y4M8 146 aa10.42□□□□□ -0.74
PRKDC-204ENST00000521331 AP3S2P59780 193 aa10.41□□□□□ -0.74
PRKDC-204ENST00000521331 RHOBP62745 196 aa10.41□□□□□ -0.74
PRKDC-204ENST00000521331 HIST1H1AQ02539 215 aaPredicted RBP10.41□□□□□ -0.74
PRKDC-204ENST00000521331 FCN2Q15485 313 aa10.41□□□□□ -0.74
PRKDC-204ENST00000521331 SPANXN5Q5MJ07 72 aa10.41□□□□□ -0.74
PRKDC-204ENST00000521331 SPANXN2Q5MJ10 180 aa10.41□□□□□ -0.74
PRKDC-204ENST00000521331 ACOT7LQ6ZUV0 252 aa10.41□□□□□ -0.74
PRKDC-204ENST00000521331 TMEM144Q7Z5S9 345 aa10.41□□□□□ -0.74
PRKDC-204ENST00000521331 S100A7AQ86SG5 101 aa10.41□□□□□ -0.74
PRKDC-204ENST00000521331 OR8A1Q8NGG7 326 aa10.41□□□□□ -0.74
PRKDC-204ENST00000521331 RNF141Q8WVD5 230 aa10.41□□□□□ -0.74
PRKDC-204ENST00000521331 SOSTQ9BQB4 213 aa10.41□□□□□ -0.74
PRKDC-204ENST00000521331 HIGD1AQ9Y241 93 aa10.41□□□□□ -0.74
PRKDC-204ENST00000521331 STRAPQ9Y3F4 350 aaKnown RBP10.41□□□□□ -0.74
PRKDC-204ENST00000521331 TIMM8BQ9Y5J9 83 aaPredicted RBP10.41□□□□□ -0.74
PRKDC-204ENST00000521331 FABP12A6NFH5 140 aa10.4□□□□□ -0.74
PRKDC-204ENST00000521331 IL5P05113 134 aa10.4□□□□□ -0.74
PRKDC-204ENST00000521331 ZNF493Q6ZR52 646 aa10.4□□□□□ -0.74
PRKDC-204ENST00000521331 CYP2G1PQ6ZSU1 146 aa10.4□□□□□ -0.74
PRKDC-204ENST00000521331 SLC25A21Q9BQT8 299 aaPredicted RBP10.4□□□□□ -0.74
PRKDC-204ENST00000521331 V9GYH0 126 aa10.4□□□□□ -0.74
PRKDC-204ENST00000521331 A0A087X0K7 114 aa10.39□□□□□ -0.75
PRKDC-204ENST00000521331 SMCO3A2RU48 225 aa10.39□□□□□ -0.75
PRKDC-204ENST00000521331 H3BP45 60 aa10.39□□□□□ -0.75
PRKDC-204ENST00000521331 HYPMO75409 117 aa10.39□□□□□ -0.75
PRKDC-204ENST00000521331 SFT2D2O95562 160 aa10.39□□□□□ -0.75
PRKDC-204ENST00000521331 HTN1P15515 57 aa10.39□□□□□ -0.75
PRKDC-204ENST00000521331 CXCL3P19876 107 aa10.39□□□□□ -0.75
PRKDC-204ENST00000521331 TNFSF8P32971 234 aa10.39□□□□□ -0.75
PRKDC-204ENST00000521331 PLP1P60201 277 aa10.39□□□□□ -0.75
PRKDC-204ENST00000521331 SELENOTP62341 195 aa10.39□□□□□ -0.75
PRKDC-204ENST00000521331 ASAH1Q13510 395 aa10.39□□□□□ -0.75
PRKDC-204ENST00000521331 PSG3Q16557 428 aa10.39□□□□□ -0.75
PRKDC-204ENST00000521331 TTC32Q5I0X7 151 aa10.39□□□□□ -0.75
PRKDC-204ENST00000521331 SSX7Q7RTT5 188 aa10.39□□□□□ -0.75
PRKDC-204ENST00000521331 OR10J6PQ8NGY7 276 aa10.39□□□□□ -0.75
PRKDC-204ENST00000521331 LRRC20Q8TCA0 184 aa10.39□□□□□ -0.75
PRKDC-204ENST00000521331 RNF24Q9Y225 148 aa10.39□□□□□ -0.75
PRKDC-204ENST00000521331 HOXB5P09067 269 aa10.38□□□□□ -0.75
PRKDC-204ENST00000521331 CDKN1BP46527 198 aa10.38□□□□□ -0.75
PRKDC-204ENST00000521331 Q8N1X5 172 aa10.38□□□□□ -0.75
PRKDC-204ENST00000521331 TOMM5Q8N4H5 51 aa10.38□□□□□ -0.75
PRKDC-204ENST00000521331 TMEM263Q8WUH6 116 aaKnown RBP10.38□□□□□ -0.75
PRKDC-204ENST00000521331 SRRQ9GZT4 340 aa10.38□□□□□ -0.75
PRKDC-204ENST00000521331 Q9H8V8 135 aa10.38□□□□□ -0.75
PRKDC-204ENST00000521331 H7BYZ3 331 aa10.37□□□□□ -0.75
PRKDC-204ENST00000521331 ADAP1O75689 374 aa10.37□□□□□ -0.75
PRKDC-204ENST00000521331 OR5G3P0C626 314 aa10.37□□□□□ -0.75
PRKDC-204ENST00000521331 LINC00869P0C866 280 aa10.37□□□□□ -0.75
PRKDC-204ENST00000521331 PPP1R1AQ13522 171 aa10.37□□□□□ -0.75
PRKDC-204ENST00000521331 SPATA12Q7Z6I5 190 aa10.37□□□□□ -0.75
PRKDC-204ENST00000521331 RNASE8Q8TDE3 154 aaKnown RBP10.37□□□□□ -0.75
PRKDC-204ENST00000521331 DEDD2Q8WXF8 326 aa10.37□□□□□ -0.75
PRKDC-204ENST00000521331 TRIM63Q969Q1 353 aa10.37□□□□□ -0.75
PRKDC-204ENST00000521331 ZNF503Q96F45 646 aa10.37□□□□□ -0.75
PRKDC-204ENST00000521331 C20orf144Q9BQM9 153 aa10.37□□□□□ -0.75
PRKDC-204ENST00000521331 NOP10Q9NPE3 64 aaKnown RBP10.37□□□□□ -0.75
PRKDC-204ENST00000521331 DNAH5Q8TE73 4624 aa10.36□□□□□ -0.75
PRKDC-204ENST00000521331 CXCL2P19875 107 aa10.36□□□□□ -0.75
PRKDC-204ENST00000521331 RPUSD4Q96CM3 377 aaKnown RBP10.36□□□□□ -0.75
PRKDC-204ENST00000521331 GNPNAT1Q96EK6 184 aaPredicted RBP10.36□□□□□ -0.75
PRKDC-204ENST00000521331 ST6GAL2Q96JF0 529 aa10.36□□□□□ -0.75
PRKDC-204ENST00000521331 UHRF2Q96PU4 802 aa10.36□□□□□ -0.75
PRKDC-204ENST00000521331 CCNKO75909 580 aa10.35□□□□□ -0.75
PRKDC-204ENST00000521331 BTF3P20290 206 aaKnown RBP10.35□□□□□ -0.75
PRKDC-204ENST00000521331 M6PRP20645 277 aa10.35□□□□□ -0.75
PRKDC-204ENST00000521331 UBE2MP61081 183 aaKnown RBP10.35□□□□□ -0.75
PRKDC-204ENST00000521331 ID3Q02535 119 aa10.35□□□□□ -0.75
PRKDC-204ENST00000521331 OR5I1Q13606 314 aa10.35□□□□□ -0.75
PRKDC-204ENST00000521331 PYDC2Q56P42 97 aa10.35□□□□□ -0.75
PRKDC-204ENST00000521331 RXFP4Q8TDU9 374 aa10.35□□□□□ -0.75
PRKDC-204ENST00000521331 UPK3BQ9BT76 320 aa10.35□□□□□ -0.75
PRKDC-204ENST00000521331 Q9H3A6 140 aa10.35□□□□□ -0.75
PRKDC-204ENST00000521331 PSENENQ9NZ42 101 aa10.35□□□□□ -0.75
PRKDC-204ENST00000521331 TRAV26-1A0A087WT03 109 aa10.34□□□□□ -0.75
PRKDC-204ENST00000521331 A0A1W2PPQ1 181 aa10.34□□□□□ -0.75
PRKDC-204ENST00000521331 FNDC10F2Z333 226 aa10.34□□□□□ -0.75
PRKDC-204ENST00000521331 K7EPK0 472 aa10.34□□□□□ -0.75
PRKDC-204ENST00000521331 IL7P13232 177 aa10.34□□□□□ -0.75
PRKDC-204ENST00000521331 ANXA7P20073 488 aaKnown RBP10.34□□□□□ -0.75
PRKDC-204ENST00000521331 POLR2GP62487 172 aaKnown RBP eCLIP10.34□□□□□ -0.75
PRKDC-204ENST00000521331 DLK1P80370 383 aa10.34□□□□□ -0.75
PRKDC-204ENST00000521331 PXDC1Q5TGL8 231 aa10.34□□□□□ -0.75
PRKDC-204ENST00000521331 LCN15Q6UWW0 184 aa10.34□□□□□ -0.75
PRKDC-204ENST00000521331 CCDC28AQ8IWP9 274 aa10.34□□□□□ -0.75
PRKDC-204ENST00000521331 LINC00612Q8N6U2 182 aa10.34□□□□□ -0.75
PRKDC-204ENST00000521331 ARL6Q9H0F7 186 aa10.34□□□□□ -0.75
PRKDC-204ENST00000521331 ARV1Q9H2C2 271 aa10.34□□□□□ -0.75
PRKDC-204ENST00000521331 NPVFQ9HCQ7 196 aa10.34□□□□□ -0.75
PRKDC-204ENST00000521331 SCRT2Q9NQ03 307 aa10.34□□□□□ -0.75
PRKDC-204ENST00000521331 APOBP04114 4563 aaKnown RBP10.33□□□□□ -0.76
PRKDC-204ENST00000521331 PMS2P5A8MQ11 134 aa10.33□□□□□ -0.76
PRKDC-204ENST00000521331 H3BNG1 76 aa10.33□□□□□ -0.76
PRKDC-204ENST00000521331 MRPS12O15235 138 aaKnown RBP10.33□□□□□ -0.76
PRKDC-204ENST00000521331 NRARPQ7Z6K4 114 aa10.33□□□□□ -0.76
PRKDC-204ENST00000521331 TCTE3Q8IZS6 198 aa10.33□□□□□ -0.76
PRKDC-204ENST00000521331 SMIM8Q96KF7 97 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms