RNA–Protein interactions for RNA: ENST00000520953.5

SREK1-209, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 5

Gene SREK1, Length 2,172 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-209ENST00000520953 LINC01551Q86U37 167 aa11.51□□□□□ -0.57
SREK1-209ENST00000520953 ATP6V0BQ99437 205 aa11.51□□□□□ -0.57
SREK1-209ENST00000520953 SLC25A39Q9BZJ4 359 aaPredicted RBP11.51□□□□□ -0.57
SREK1-209ENST00000520953 TRRAPQ9Y4A5 3859 aa11.51□□□□□ -0.57
SREK1-209ENST00000520953 TRBV20OR9-2A0A075B6H5 130 aa11.51□□□□□ -0.57
SREK1-209ENST00000520953 TRBV24-1A0A075B6N3 115 aa11.51□□□□□ -0.57
SREK1-209ENST00000520953 ZNF320A2RRD8 509 aa11.51□□□□□ -0.57
SREK1-209ENST00000520953 UBE2CO00762 179 aa11.51□□□□□ -0.57
SREK1-209ENST00000520953 OR11H1Q8NG94 326 aa11.51□□□□□ -0.57
SREK1-209ENST00000520953 OR1L4Q8NGR5 311 aa11.51□□□□□ -0.57
SREK1-209ENST00000520953 C4orf3Q8WVX3 66 aa11.51□□□□□ -0.57
SREK1-209ENST00000520953 C19orf24Q9BVV8 132 aa11.51□□□□□ -0.57
SREK1-209ENST00000520953 AURKAIP1Q9NWT8 199 aaPredicted RBP11.51□□□□□ -0.57
SREK1-209ENST00000520953 TECRQ9NZ01 308 aaKnown RBP11.51□□□□□ -0.57
SREK1-209ENST00000520953 COL6A5A8TX70 2615 aa11.5□□□□□ -0.57
SREK1-209ENST00000520953 PGPEP1LA6NFU8 196 aa11.5□□□□□ -0.57
SREK1-209ENST00000520953 H7BYZ3 331 aa11.5□□□□□ -0.57
SREK1-209ENST00000520953 PFN1P07737 140 aaKnown RBP11.5□□□□□ -0.57
SREK1-209ENST00000520953 PYYP10082 97 aa11.5□□□□□ -0.57
SREK1-209ENST00000520953 HOXD3P31249 432 aaPredicted RBP11.5□□□□□ -0.57
SREK1-209ENST00000520953 RELQ04864 619 aaPredicted RBP11.5□□□□□ -0.57
SREK1-209ENST00000520953 TM4SF20Q53R12 229 aa11.5□□□□□ -0.57
SREK1-209ENST00000520953 WFDC12Q8WWY7 111 aa11.5□□□□□ -0.57
SREK1-209ENST00000520953 PFDN5Q99471 154 aa11.5□□□□□ -0.57
SREK1-209ENST00000520953 OR10J4P0C629 311 aa11.5□□□□□ -0.57
SREK1-209ENST00000520953 FABP9Q0Z7S8 132 aa11.5□□□□□ -0.57
SREK1-209ENST00000520953 NSUN5P1Q3KNT7 163 aa11.5□□□□□ -0.57
SREK1-209ENST00000520953 RAX2Q96IS3 184 aa11.5□□□□□ -0.57
SREK1-209ENST00000520953 ELOVL1Q9BW60 279 aa11.5□□□□□ -0.57
SREK1-209ENST00000520953 ELOA3CA0A087WX78 387 aaPredicted RBP11.49□□□□□ -0.57
SREK1-209ENST00000520953 H3BRN7 92 aa11.49□□□□□ -0.57
SREK1-209ENST00000520953 H3BTX0 84 aa11.49□□□□□ -0.57
SREK1-209ENST00000520953 SCGB2A1O75556 95 aa11.49□□□□□ -0.57
SREK1-209ENST00000520953 TRGC2P03986 189 aa11.49□□□□□ -0.57
SREK1-209ENST00000520953 GALR1P47211 349 aa11.49□□□□□ -0.57
SREK1-209ENST00000520953 SYNJ2BPP57105 145 aa11.49□□□□□ -0.57
SREK1-209ENST00000520953 RPEL1Q2QD12 228 aa11.49□□□□□ -0.57
SREK1-209ENST00000520953 FAM209BQ5JX69 171 aa11.49□□□□□ -0.57
SREK1-209ENST00000520953 ANAPC16Q96DE5 110 aa11.49□□□□□ -0.57
SREK1-209ENST00000520953 SHANK2-AS3Q9BTD1 123 aa11.49□□□□□ -0.57
SREK1-209ENST00000520953 TMEM167BQ9NRX6 74 aa11.49□□□□□ -0.57
SREK1-209ENST00000520953 NDUFA4O00483 81 aa11.48□□□□□ -0.57
SREK1-209ENST00000520953 OR7C2O60412 319 aa11.48□□□□□ -0.57
SREK1-209ENST00000520953 PQLC2Q6ZP29 291 aa11.48□□□□□ -0.57
SREK1-209ENST00000520953 OR1N2Q8NGR9 330 aa11.48□□□□□ -0.57
SREK1-209ENST00000520953 TMEM190Q8WZ59 177 aa11.48□□□□□ -0.57
SREK1-209ENST00000520953 C11orf52Q96A22 123 aa11.48□□□□□ -0.57
SREK1-209ENST00000520953 RABAC1Q9UI14 185 aa11.48□□□□□ -0.57
SREK1-209ENST00000520953 TSSC4Q9Y5U2 329 aaPredicted RBP11.48□□□□□ -0.57
SREK1-209ENST00000520953 ARL2-SNX15V9GYD0 113 aa11.48□□□□□ -0.57
SREK1-209ENST00000520953 ZNF98A6NK75 572 aa11.48□□□□□ -0.57
SREK1-209ENST00000520953 C8orf88P0DMB2 117 aa11.48□□□□□ -0.57
SREK1-209ENST00000520953 TAS2R45P59539 299 aa11.48□□□□□ -0.57
SREK1-209ENST00000520953 PYGO2Q9BRQ0 406 aa11.48□□□□□ -0.57
SREK1-209ENST00000520953 MRPL32Q9BYC8 188 aaKnown RBP11.48□□□□□ -0.57
SREK1-209ENST00000520953 HIST1H2BKO60814 126 aa11.47□□□□□ -0.57
SREK1-209ENST00000520953 HIST1H2BJP06899 126 aa11.47□□□□□ -0.57
SREK1-209ENST00000520953 HIST1H2BOP23527 126 aa11.47□□□□□ -0.57
SREK1-209ENST00000520953 HIST1H2BBP33778 126 aa11.47□□□□□ -0.57
SREK1-209ENST00000520953 HIST1H2BDP58876 126 aa11.47□□□□□ -0.57
SREK1-209ENST00000520953 HIST1H2BCP62807 126 aa11.47□□□□□ -0.57
SREK1-209ENST00000520953 FOXL1Q12952 345 aa11.47□□□□□ -0.57
SREK1-209ENST00000520953 HIST2H2BEQ16778 126 aa11.47□□□□□ -0.57
SREK1-209ENST00000520953 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.47□□□□□ -0.57
SREK1-209ENST00000520953 GPHB5Q86YW7 130 aa11.47□□□□□ -0.57
SREK1-209ENST00000520953 HIST1H2BHQ93079 126 aa11.47□□□□□ -0.57
SREK1-209ENST00000520953 HIST1H2BNQ99877 126 aa11.47□□□□□ -0.57
SREK1-209ENST00000520953 HIST1H2BMQ99879 126 aa11.47□□□□□ -0.57
SREK1-209ENST00000520953 LINC01619G3V211 115 aa11.46□□□□□ -0.57
SREK1-209ENST00000520953 PHOX2AO14813 284 aa11.46□□□□□ -0.57
SREK1-209ENST00000520953 PRB4P10163 310 aaPredicted RBP11.46□□□□□ -0.57
SREK1-209ENST00000520953 GP9P14770 177 aa11.46□□□□□ -0.57
SREK1-209ENST00000520953 RNF2Q99496 336 aa11.46□□□□□ -0.57
SREK1-209ENST00000520953 TMEM213A2RRL7 107 aa11.45□□□□□ -0.58
SREK1-209ENST00000520953 GGTLC3B5MD39 225 aa11.45□□□□□ -0.58
SREK1-209ENST00000520953 S100PP25815 95 aa11.45□□□□□ -0.58
SREK1-209ENST00000520953 CRYBB3P26998 211 aa11.45□□□□□ -0.58
SREK1-209ENST00000520953 OCC1Q8TAD7 63 aa11.45□□□□□ -0.58
SREK1-209ENST00000520953 DLX4Q92988 240 aaPredicted RBP11.45□□□□□ -0.58
SREK1-209ENST00000520953 FXYD5Q96DB9 178 aa11.45□□□□□ -0.58
SREK1-209ENST00000520953 C17orf77Q96MU5 243 aa11.45□□□□□ -0.58
SREK1-209ENST00000520953 MRPS12O15235 138 aaKnown RBP11.45□□□□□ -0.58
SREK1-209ENST00000520953 BUB3O43684 328 aa11.45□□□□□ -0.58
SREK1-209ENST00000520953 KLF5Q13887 457 aaPredicted RBP11.45□□□□□ -0.58
SREK1-209ENST00000520953 FRZBQ92765 325 aa11.45□□□□□ -0.58
SREK1-209ENST00000520953 DPF1Q92782 380 aa11.45□□□□□ -0.58
SREK1-209ENST00000520953 METTL26Q96S19 204 aa11.45□□□□□ -0.58
SREK1-209ENST00000520953 U3KQE9 123 aa11.45□□□□□ -0.58
SREK1-209ENST00000520953 A0A1B0GUS0 222 aa11.44□□□□□ -0.58
SREK1-209ENST00000520953 CCL24O00175 119 aa11.44□□□□□ -0.58
SREK1-209ENST00000520953 FAM106AQ4KMX7 169 aa11.44□□□□□ -0.58
SREK1-209ENST00000520953 SFRP2Q96HF1 295 aa11.44□□□□□ -0.58
SREK1-209ENST00000520953 PAXXQ9BUH6 204 aa11.44□□□□□ -0.58
SREK1-209ENST00000520953 OR51M1Q9H341 326 aa11.44□□□□□ -0.58
SREK1-209ENST00000520953 SRD5A3Q9H8P0 318 aa11.44□□□□□ -0.58
SREK1-209ENST00000520953 SMAD5-AS1Q9Y6J3 95 aa11.44□□□□□ -0.58
SREK1-209ENST00000520953 A0A1W2PPQ1 181 aa11.44□□□□□ -0.58
SREK1-209ENST00000520953 K7EN84 100 aa11.44□□□□□ -0.58
SREK1-209ENST00000520953 NDUFA6P56556 154 aa11.44□□□□□ -0.58
SREK1-209ENST00000520953 UBE2L3P68036 154 aaKnown RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms