RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 TNP2Q05952 138 aa15.08■□□□□ 0
CPNE1-220ENST00000458038 SMIM8Q96KF7 97 aa15.08■□□□□ 0
CPNE1-220ENST00000458038 C20orf144Q9BQM9 153 aa15.08■□□□□ 0
CPNE1-220ENST00000458038 V9GYH0 126 aa15.08■□□□□ 0
CPNE1-220ENST00000458038 S100A5P33763 92 aa15.07■□□□□ 0
CPNE1-220ENST00000458038 CDKN1BP46527 198 aa15.07■□□□□ 0
CPNE1-220ENST00000458038 POLR2GP62487 172 aaKnown RBP eCLIP15.07■□□□□ 0
CPNE1-220ENST00000458038 CLINT1Q14677 625 aa15.07■□□□□ 0
CPNE1-220ENST00000458038 FCN2Q15485 313 aa15.07■□□□□ 0
CPNE1-220ENST00000458038 OR10J6PQ8NGY7 276 aa15.07■□□□□ 0
CPNE1-220ENST00000458038 C9orf170A2RU37 121 aa15.06■□□□□ 0
CPNE1-220ENST00000458038 PMS2P5A8MQ11 134 aa15.06■□□□□ 0
CPNE1-220ENST00000458038 H7BYZ3 331 aa15.06■□□□□ 0
CPNE1-220ENST00000458038 ADAP1O75689 374 aa15.06■□□□□ 0
CPNE1-220ENST00000458038 TMEM263Q8WUH6 116 aaKnown RBP15.06■□□□□ 0
CPNE1-220ENST00000458038 RPUSD4Q96CM3 377 aaKnown RBP15.06■□□□□ 0
CPNE1-220ENST00000458038 HTN1P15515 57 aa15.05■□□□□ -0
CPNE1-220ENST00000458038 ANXA7P20073 488 aaKnown RBP15.05■□□□□ -0
CPNE1-220ENST00000458038 C4orf46Q504U0 113 aa15.05■□□□□ -0
CPNE1-220ENST00000458038 TEPPQ6URK8 271 aa15.05■□□□□ -0
CPNE1-220ENST00000458038 LCN15Q6UWW0 184 aa15.05■□□□□ -0
CPNE1-220ENST00000458038 OR10P1Q8NGE3 313 aa15.05■□□□□ -0
CPNE1-220ENST00000458038 UHRF2Q96PU4 802 aa15.05■□□□□ -0
CPNE1-220ENST00000458038 SLC50A1Q9BRV3 221 aa15.05■□□□□ -0
CPNE1-220ENST00000458038 ARL6Q9H0F7 186 aa15.05■□□□□ -0
CPNE1-220ENST00000458038 MGAT4CQ9UBM8 478 aa15.05■□□□□ -0
CPNE1-220ENST00000458038 LINC00588Q9Y4M8 146 aa15.05■□□□□ -0
CPNE1-220ENST00000458038 TAS2R30P59541 319 aa15.04■□□□□ -0
CPNE1-220ENST00000458038 RNASE8Q8TDE3 154 aaKnown RBP15.04■□□□□ -0
CPNE1-220ENST00000458038 RNF141Q8WVD5 230 aa15.04■□□□□ -0
CPNE1-220ENST00000458038 ZNF503Q96F45 646 aa15.04■□□□□ -0
CPNE1-220ENST00000458038 ARV1Q9H2C2 271 aa15.04■□□□□ -0
CPNE1-220ENST00000458038 NAP1L6A6NFF2 107 aa15.03■□□□□ -0
CPNE1-220ENST00000458038 GOSR2O14653 212 aa15.03■□□□□ -0
CPNE1-220ENST00000458038 SSSCA1O60232 199 aa15.03■□□□□ -0
CPNE1-220ENST00000458038 TMEM14EPQ6UXP3 125 aa15.03■□□□□ -0
CPNE1-220ENST00000458038 PATE2Q6UY27 113 aa15.03■□□□□ -0
CPNE1-220ENST00000458038 SSX7Q7RTT5 188 aa15.03■□□□□ -0
CPNE1-220ENST00000458038 CCDC190Q86UF4 302 aa15.03■□□□□ -0
CPNE1-220ENST00000458038 KRTAP4-5Q9BYR2 181 aa15.03■□□□□ -0
CPNE1-220ENST00000458038 NOP10Q9NPE3 64 aaKnown RBP15.03■□□□□ -0
CPNE1-220ENST00000458038 ZNF331Q9NQX6 463 aaPredicted RBP15.03■□□□□ -0
CPNE1-220ENST00000458038 MRPS12O15235 138 aaKnown RBP15.02■□□□□ -0
CPNE1-220ENST00000458038 RRAS2P62070 204 aaPredicted RBP15.02■□□□□ -0
CPNE1-220ENST00000458038 TTC32Q5I0X7 151 aa15.02■□□□□ -0
CPNE1-220ENST00000458038 ZNF546Q86UE3 836 aa15.02■□□□□ -0
CPNE1-220ENST00000458038 BPIFA4PQ86YQ2 179 aa15.02■□□□□ -0
CPNE1-220ENST00000458038 CCDC28AQ8IWP9 274 aa15.02■□□□□ -0
CPNE1-220ENST00000458038 GGACTQ9BVM4 153 aa15.02■□□□□ -0
CPNE1-220ENST00000458038 Q9H8V8 135 aa15.02■□□□□ -0
CPNE1-220ENST00000458038 TSC22D2O75157 780 aa15.01□□□□□ -0.01
CPNE1-220ENST00000458038 NDUFB6O95139 128 aa15.01□□□□□ -0.01
CPNE1-220ENST00000458038 METTL15P1P0C7V9 234 aa15.01□□□□□ -0.01
CPNE1-220ENST00000458038 GNPNAT1Q96EK6 184 aaPredicted RBP15.01□□□□□ -0.01
CPNE1-220ENST00000458038 HSPG2P98160 4391 aa15.01□□□□□ -0.01
CPNE1-220ENST00000458038 M6PRP20645 277 aa15□□□□□ -0.01
CPNE1-220ENST00000458038 SPANXN2Q5MJ10 180 aa15□□□□□ -0.01
CPNE1-220ENST00000458038 LINC00305Q7Z4B0 112 aa15□□□□□ -0.01
CPNE1-220ENST00000458038 LINC00612Q8N6U2 182 aa15□□□□□ -0.01
CPNE1-220ENST00000458038 RXFP4Q8TDU9 374 aa15□□□□□ -0.01
CPNE1-220ENST00000458038 PXMP4Q9Y6I8 212 aa15□□□□□ -0.01
CPNE1-220ENST00000458038 H3BNG1 76 aa14.99□□□□□ -0.01
CPNE1-220ENST00000458038 OR4E1P0C645 316 aa14.99□□□□□ -0.01
CPNE1-220ENST00000458038 BTF3P20290 206 aaKnown RBP14.99□□□□□ -0.01
CPNE1-220ENST00000458038 INPP1P49441 399 aa14.99□□□□□ -0.01
CPNE1-220ENST00000458038 SLC38A11Q08AI6 406 aa14.99□□□□□ -0.01
CPNE1-220ENST00000458038 OR5I1Q13606 314 aa14.99□□□□□ -0.01
CPNE1-220ENST00000458038 A0A1W2PPQ1 181 aa14.98□□□□□ -0.01
CPNE1-220ENST00000458038 AGPAT2O15120 278 aa14.98□□□□□ -0.01
CPNE1-220ENST00000458038 CCNKO75909 580 aa14.98□□□□□ -0.01
CPNE1-220ENST00000458038 TRAV26-1A0A087WT03 109 aa14.97□□□□□ -0.01
CPNE1-220ENST00000458038 SNURFLB1AK76 121 aa14.97□□□□□ -0.01
CPNE1-220ENST00000458038 COX7A2P2O60397 106 aa14.97□□□□□ -0.01
CPNE1-220ENST00000458038 IAH1Q2TAA2 248 aaPredicted RBP14.97□□□□□ -0.01
CPNE1-220ENST00000458038 MAPKAPK5-AS1Q8N8E1 139 aa14.97□□□□□ -0.01
CPNE1-220ENST00000458038 UPK3BQ9BT76 320 aa14.97□□□□□ -0.01
CPNE1-220ENST00000458038 Q9H3A6 140 aa14.97□□□□□ -0.01
CPNE1-220ENST00000458038 ZNF701M0R085 212 aaPredicted RBP14.96□□□□□ -0.01
CPNE1-220ENST00000458038 RLN2P04090 185 aa14.96□□□□□ -0.01
CPNE1-220ENST00000458038 GUK1Q16774 197 aa14.96□□□□□ -0.01
CPNE1-220ENST00000458038 CNPY1Q3B7I2 92 aa14.96□□□□□ -0.01
CPNE1-220ENST00000458038 ODF3Q96PU9 254 aa14.96□□□□□ -0.01
CPNE1-220ENST00000458038 SRRQ9GZT4 340 aa14.96□□□□□ -0.01
CPNE1-220ENST00000458038 CENPXA8MT69 81 aa14.95□□□□□ -0.02
CPNE1-220ENST00000458038 SCGB1D2O95969 90 aa14.95□□□□□ -0.02
CPNE1-220ENST00000458038 RAB31Q13636 194 aa14.95□□□□□ -0.02
CPNE1-220ENST00000458038 GFI1BQ5VTD9 330 aa14.95□□□□□ -0.02
CPNE1-220ENST00000458038 C10orf113Q5VZT2 155 aa14.95□□□□□ -0.02
CPNE1-220ENST00000458038 TRIQKQ629K1 86 aa14.95□□□□□ -0.02
CPNE1-220ENST00000458038 ZBTB8BQ8NAP8 495 aaPredicted RBP14.95□□□□□ -0.02
CPNE1-220ENST00000458038 FLVCR2Q9UPI3 526 aa14.95□□□□□ -0.02
CPNE1-220ENST00000458038 ABCA13Q86UQ4 5058 aa14.95□□□□□ -0.02
CPNE1-220ENST00000458038 CCDC160A6NGH7 325 aa14.94□□□□□ -0.02
CPNE1-220ENST00000458038 LEPP41159 167 aa14.94□□□□□ -0.02
CPNE1-220ENST00000458038 Q6ZRG5 221 aa14.94□□□□□ -0.02
CPNE1-220ENST00000458038 TMEM37Q8WXS4 190 aa14.94□□□□□ -0.02
CPNE1-220ENST00000458038 PYGO2Q9BRQ0 406 aa14.94□□□□□ -0.02
CPNE1-220ENST00000458038 DNAJC4Q9NNZ3 241 aa14.94□□□□□ -0.02
CPNE1-220ENST00000458038 GSKIPQ9P0R6 139 aa14.94□□□□□ -0.02
CPNE1-220ENST00000458038 IGLC2P0DOY2 106 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 170.4 ms