RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 LINC00527Q9UJ94 153 aa12.15□□□□□ -0.47
SNX13-204ENST00000444712 IZUMO1RA6ND01 250 aa12.14□□□□□ -0.47
SNX13-204ENST00000444712 PSG3Q16557 428 aa12.14□□□□□ -0.47
SNX13-204ENST00000444712 CYB5R2Q6BCY4 276 aa12.14□□□□□ -0.47
SNX13-204ENST00000444712 RASL11AQ6T310 242 aa12.14□□□□□ -0.47
SNX13-204ENST00000444712 TEX29Q8N6K0 151 aa12.14□□□□□ -0.47
SNX13-204ENST00000444712 MAPK1IP1LQ8NDC0 245 aa12.14□□□□□ -0.47
SNX13-204ENST00000444712 Q96MF0 132 aa12.14□□□□□ -0.47
SNX13-204ENST00000444712 GNB1LQ9BYB4 327 aa12.14□□□□□ -0.47
SNX13-204ENST00000444712 BUB3O43684 328 aa12.13□□□□□ -0.47
SNX13-204ENST00000444712 ARL3P36405 182 aa12.13□□□□□ -0.47
SNX13-204ENST00000444712 BLCAPP62952 87 aa12.13□□□□□ -0.47
SNX13-204ENST00000444712 COA6Q5JTJ3 125 aaKnown RBP12.13□□□□□ -0.47
SNX13-204ENST00000444712 PRRC2AP48634 2157 aaKnown RBP12.13□□□□□ -0.47
SNX13-204ENST00000444712 IGLV2-11P01706 119 aa12.13□□□□□ -0.47
SNX13-204ENST00000444712 P01737 135 aa12.13□□□□□ -0.47
SNX13-204ENST00000444712 SMIM6P0DI80 62 aa12.13□□□□□ -0.47
SNX13-204ENST00000444712 S100A2P29034 98 aa12.13□□□□□ -0.47
SNX13-204ENST00000444712 PRNTQ86SH4 94 aa12.13□□□□□ -0.47
SNX13-204ENST00000444712 OR4B1Q8NGF8 309 aa12.13□□□□□ -0.47
SNX13-204ENST00000444712 TSKUQ8WUA8 353 aa12.13□□□□□ -0.47
SNX13-204ENST00000444712 SGK494Q96LW2 274 aa12.13□□□□□ -0.47
SNX13-204ENST00000444712 SLC50A1Q9BRV3 221 aa12.13□□□□□ -0.47
SNX13-204ENST00000444712 RPP21Q9H633 154 aaKnown RBP12.13□□□□□ -0.47
SNX13-204ENST00000444712 NAT8BQ9UHF3 227 aa12.13□□□□□ -0.47
SNX13-204ENST00000444712 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.12□□□□□ -0.47
SNX13-204ENST00000444712 IGHV3-35A0A0C4DH35 117 aa12.12□□□□□ -0.47
SNX13-204ENST00000444712 IGLV1-40P01703 118 aa12.12□□□□□ -0.47
SNX13-204ENST00000444712 IGHV4-59P01825 116 aa12.12□□□□□ -0.47
SNX13-204ENST00000444712 NOL4LQ96MY1 436 aaPredicted RBP12.12□□□□□ -0.47
SNX13-204ENST00000444712 PSG8Q9UQ74 426 aa12.12□□□□□ -0.47
SNX13-204ENST00000444712 EPG5Q9HCE0 2579 aa12.11□□□□□ -0.47
SNX13-204ENST00000444712 XKRY2A2RUG3 117 aa12.11□□□□□ -0.47
SNX13-204ENST00000444712 TMEM89A2RUT3 159 aa12.11□□□□□ -0.47
SNX13-204ENST00000444712 C19orf71A6NCJ1 209 aa12.11□□□□□ -0.47
SNX13-204ENST00000444712 ZNF785A8K8V0 405 aa12.11□□□□□ -0.47
SNX13-204ENST00000444712 A8MWL6 223 aa12.11□□□□□ -0.47
SNX13-204ENST00000444712 NDUFA4O00483 81 aa12.11□□□□□ -0.47
SNX13-204ENST00000444712 PF4V1P10720 104 aa12.11□□□□□ -0.47
SNX13-204ENST00000444712 HIST3H2BBQ8N257 126 aa12.11□□□□□ -0.47
SNX13-204ENST00000444712 GBGT1Q8N5D6 347 aa12.11□□□□□ -0.47
SNX13-204ENST00000444712 PRSS22Q9GZN4 317 aa12.11□□□□□ -0.47
SNX13-204ENST00000444712 VPREB3Q9UKI3 123 aa12.11□□□□□ -0.47
SNX13-204ENST00000444712 CLPSL1A2RUU4 121 aa12.11□□□□□ -0.47
SNX13-204ENST00000444712 CFHR3Q02985 330 aa12.11□□□□□ -0.47
SNX13-204ENST00000444712 Q6YL49 198 aa12.11□□□□□ -0.47
SNX13-204ENST00000444712 GFRA4Q9GZZ7 299 aa12.11□□□□□ -0.47
SNX13-204ENST00000444712 U3KQE9 123 aa12.11□□□□□ -0.47
SNX13-204ENST00000444712 TRAV8-1A0A0A6YYK1 113 aa12.1□□□□□ -0.47
SNX13-204ENST00000444712 FAM231BA6NCW3 169 aa12.1□□□□□ -0.47
SNX13-204ENST00000444712 SNURFLB1AK76 121 aa12.1□□□□□ -0.47
SNX13-204ENST00000444712 HLA-DQA1P01909 254 aa12.1□□□□□ -0.47
SNX13-204ENST00000444712 ATP5L2Q7Z4Y8 100 aa12.1□□□□□ -0.47
SNX13-204ENST00000444712 WIPF2Q8TF74 440 aaPredicted RBP12.1□□□□□ -0.47
SNX13-204ENST00000444712 MRPL18Q9H0U6 180 aaKnown RBP12.1□□□□□ -0.47
SNX13-204ENST00000444712 ZNF331Q9NQX6 463 aaPredicted RBP12.1□□□□□ -0.47
SNX13-204ENST00000444712 CLEC5AQ9NY25 188 aa12.1□□□□□ -0.47
SNX13-204ENST00000444712 SMAD5-AS1Q9Y6J3 95 aa12.1□□□□□ -0.47
SNX13-204ENST00000444712 LRRK2Q5S007 2527 aa12.1□□□□□ -0.47
SNX13-204ENST00000444712 TCL1AP56279 114 aa12.1□□□□□ -0.47
SNX13-204ENST00000444712 C12orf57Q99622 126 aa12.1□□□□□ -0.47
SNX13-204ENST00000444712 IGHV3OR16-8A0A075B7F1 116 aa12.09□□□□□ -0.47
SNX13-204ENST00000444712 NPIPB6E9PJ23 425 aa12.09□□□□□ -0.47
SNX13-204ENST00000444712 M0R3E3 92 aa12.09□□□□□ -0.47
SNX13-204ENST00000444712 CBLN1P23435 193 aa12.09□□□□□ -0.47
SNX13-204ENST00000444712 SAPCD1Q5SSQ6 148 aa12.09□□□□□ -0.47
SNX13-204ENST00000444712 KRTAP1-3Q8IUG1 177 aa12.09□□□□□ -0.47
SNX13-204ENST00000444712 PRDM13Q9H4Q3 707 aa12.09□□□□□ -0.47
SNX13-204ENST00000444712 CT45A10P0DMU9 189 aa12.08□□□□□ -0.48
SNX13-204ENST00000444712 PSMG3-AS1Q96PY0 264 aa12.08□□□□□ -0.48
SNX13-204ENST00000444712 CHEK1O14757 476 aa12.08□□□□□ -0.48
SNX13-204ENST00000444712 CA1P00915 261 aaPredicted RBP12.08□□□□□ -0.48
SNX13-204ENST00000444712 IGHG4P01861 327 aa12.08□□□□□ -0.48
SNX13-204ENST00000444712 CIARTQ8N365 385 aaPredicted RBP12.08□□□□□ -0.48
SNX13-204ENST00000444712 NUP35Q8NFH5 326 aa12.08□□□□□ -0.48
SNX13-204ENST00000444712 MRPL53Q96EL3 112 aaKnown RBP12.08□□□□□ -0.48
SNX13-204ENST00000444712 NEU1Q99519 415 aa12.08□□□□□ -0.48
SNX13-204ENST00000444712 ASH1LQ9NR48 2969 aaKnown RBP12.07□□□□□ -0.48
SNX13-204ENST00000444712 A0A1W2PS18 150 aa12.07□□□□□ -0.48
SNX13-204ENST00000444712 HIGD1CA8MV81 97 aa12.07□□□□□ -0.48
SNX13-204ENST00000444712 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.07□□□□□ -0.48
SNX13-204ENST00000444712 Q6ZS46 218 aa12.07□□□□□ -0.48
SNX13-204ENST00000444712 OR4X2Q8NGF9 303 aa12.07□□□□□ -0.48
SNX13-204ENST00000444712 GPR61Q9BZJ8 451 aa12.07□□□□□ -0.48
SNX13-204ENST00000444712 RBAKDNA6NC62 111 aa12.06□□□□□ -0.48
SNX13-204ENST00000444712 MRPL54Q6P161 138 aaKnown RBP12.06□□□□□ -0.48
SNX13-204ENST00000444712 C16orf54Q6UWD8 224 aa12.06□□□□□ -0.48
SNX13-204ENST00000444712 TMEM136Q6ZRR5 245 aa12.06□□□□□ -0.48
SNX13-204ENST00000444712 COX8CQ7Z4L0 72 aa12.06□□□□□ -0.48
SNX13-204ENST00000444712 NPFFR1Q9GZQ6 430 aa12.06□□□□□ -0.48
SNX13-204ENST00000444712 RAB4BP61018 213 aa12.06□□□□□ -0.48
SNX13-204ENST00000444712 SLC35B1P78383 322 aa12.06□□□□□ -0.48
SNX13-204ENST00000444712 LINC00322Q6ZN03 302 aaPredicted RBP12.06□□□□□ -0.48
SNX13-204ENST00000444712 ZC2HC1AQ96GY0 325 aa12.06□□□□□ -0.48
SNX13-204ENST00000444712 NDFIP1Q9BT67 221 aa12.06□□□□□ -0.48
SNX13-204ENST00000444712 KLK15Q9H2R5 256 aa12.06□□□□□ -0.48
SNX13-204ENST00000444712 IFITM10A6NMD0 228 aa12.05□□□□□ -0.48
SNX13-204ENST00000444712 SPINK4O60575 86 aa12.05□□□□□ -0.48
SNX13-204ENST00000444712 PSMB8P28062 276 aa12.05□□□□□ -0.48
SNX13-204ENST00000444712 GFI1BQ5VTD9 330 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms