RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 ODF3BA8MYP8 253 aa5.77□□□□□ -1.49
CDC42BPA-208ENST00000442054 TSTD3H0UI37 97 aa5.77□□□□□ -1.49
CDC42BPA-208ENST00000442054 RNASE2P10153 161 aaKnown RBP5.77□□□□□ -1.49
CDC42BPA-208ENST00000442054 S100A7P31151 101 aa5.77□□□□□ -1.49
CDC42BPA-208ENST00000442054 HSPE1P61604 102 aaKnown RBP5.77□□□□□ -1.49
CDC42BPA-208ENST00000442054 PRR31Q5SQ13 230 aa5.77□□□□□ -1.49
CDC42BPA-208ENST00000442054 GDF5OSQ5U4N7 250 aa5.77□□□□□ -1.49
CDC42BPA-208ENST00000442054 ZNF562Q6V9R5 426 aa5.77□□□□□ -1.49
CDC42BPA-208ENST00000442054 TEX45Q8NA69 505 aa5.77□□□□□ -1.49
CDC42BPA-208ENST00000442054 WFDC12Q8WWY7 111 aa5.77□□□□□ -1.49
CDC42BPA-208ENST00000442054 GRAMD2BQ96HH9 432 aa5.77□□□□□ -1.49
CDC42BPA-208ENST00000442054 GNB1LQ9BYB4 327 aa5.77□□□□□ -1.49
CDC42BPA-208ENST00000442054 NDUFA4L2Q9NRX3 87 aa5.77□□□□□ -1.49
CDC42BPA-208ENST00000442054 TEX50A0A1B0GTY4 177 aa5.77□□□□□ -1.49
CDC42BPA-208ENST00000442054 UPK2O00526 184 aa5.77□□□□□ -1.49
CDC42BPA-208ENST00000442054 HOXD3P31249 432 aaPredicted RBP5.77□□□□□ -1.49
CDC42BPA-208ENST00000442054 DLX6P56179 175 aa5.77□□□□□ -1.49
CDC42BPA-208ENST00000442054 OXLD1Q5BKU9 147 aa5.77□□□□□ -1.49
CDC42BPA-208ENST00000442054 WIPF2Q8TF74 440 aaPredicted RBP5.77□□□□□ -1.49
CDC42BPA-208ENST00000442054 ST6GALNAC6Q969X2 333 aa5.77□□□□□ -1.49
CDC42BPA-208ENST00000442054 TMEM18Q96B42 140 aa5.77□□□□□ -1.49
CDC42BPA-208ENST00000442054 TRAPPC1Q9Y5R8 145 aa5.77□□□□□ -1.49
CDC42BPA-208ENST00000442054 SLC17A3O00476 420 aa5.77□□□□□ -1.49
CDC42BPA-208ENST00000442054 IGLL1P15814 213 aa5.77□□□□□ -1.49
CDC42BPA-208ENST00000442054 GPR183P32249 361 aa5.77□□□□□ -1.49
CDC42BPA-208ENST00000442054 ARL3P36405 182 aa5.77□□□□□ -1.49
CDC42BPA-208ENST00000442054 SSBP2P81877 361 aaPredicted RBP5.77□□□□□ -1.49
CDC42BPA-208ENST00000442054 C10orf55Q5SWW7 151 aa5.77□□□□□ -1.49
CDC42BPA-208ENST00000442054 TEPPQ6URK8 271 aa5.77□□□□□ -1.49
CDC42BPA-208ENST00000442054 PATE2Q6UY27 113 aa5.77□□□□□ -1.49
CDC42BPA-208ENST00000442054 C5orf56Q8N8D9 126 aa5.77□□□□□ -1.49
CDC42BPA-208ENST00000442054 LINC01619G3V211 115 aa5.76□□□□□ -1.49
CDC42BPA-208ENST00000442054 RAB9AP51151 201 aa5.76□□□□□ -1.49
CDC42BPA-208ENST00000442054 SYNJ2BPP57105 145 aa5.76□□□□□ -1.49
CDC42BPA-208ENST00000442054 RAB31Q13636 194 aa5.76□□□□□ -1.49
CDC42BPA-208ENST00000442054 C9orf66Q5T8R8 295 aa5.76□□□□□ -1.49
CDC42BPA-208ENST00000442054 S100A7AQ86SG5 101 aa5.76□□□□□ -1.49
CDC42BPA-208ENST00000442054 SLC24A4Q8NFF2 622 aa5.76□□□□□ -1.49
CDC42BPA-208ENST00000442054 OR1L6Q8NGR2 347 aa5.76□□□□□ -1.49
CDC42BPA-208ENST00000442054 URB1-AS1Q96HZ7 61 aa5.76□□□□□ -1.49
CDC42BPA-208ENST00000442054 BET1LQ9NYM9 111 aa5.76□□□□□ -1.49
CDC42BPA-208ENST00000442054 NAGKQ9UJ70 344 aa5.76□□□□□ -1.49
CDC42BPA-208ENST00000442054 TNCP24821 2201 aa5.76□□□□□ -1.49
CDC42BPA-208ENST00000442054 ZNF785A8K8V0 405 aa5.76□□□□□ -1.49
CDC42BPA-208ENST00000442054 FCN1O00602 326 aa5.76□□□□□ -1.49
CDC42BPA-208ENST00000442054 CBLN1P23435 193 aa5.76□□□□□ -1.49
CDC42BPA-208ENST00000442054 PCP4P48539 62 aa5.76□□□□□ -1.49
CDC42BPA-208ENST00000442054 ZNF137PP52743 207 aa5.76□□□□□ -1.49
CDC42BPA-208ENST00000442054 KCNIP4Q6PIL6 250 aa5.76□□□□□ -1.49
CDC42BPA-208ENST00000442054 NIT1Q86X76 327 aa5.76□□□□□ -1.49
CDC42BPA-208ENST00000442054 C11orf42Q8N5U0 333 aa5.76□□□□□ -1.49
CDC42BPA-208ENST00000442054 AJUBAQ96IF1 538 aa5.76□□□□□ -1.49
CDC42BPA-208ENST00000442054 RCHY1Q96PM5 261 aa5.76□□□□□ -1.49
CDC42BPA-208ENST00000442054 WNT10AQ9GZT5 417 aa5.76□□□□□ -1.49
CDC42BPA-208ENST00000442054 IGHV3OR16-13A0A075B7E8 117 aa5.76□□□□□ -1.49
CDC42BPA-208ENST00000442054 IGHV3-74A0A0B4J1X5 117 aa5.76□□□□□ -1.49
CDC42BPA-208ENST00000442054 SERF1AO75920 110 aa5.76□□□□□ -1.49
CDC42BPA-208ENST00000442054 MLANAQ16655 118 aa5.76□□□□□ -1.49
CDC42BPA-208ENST00000442054 FAM71F2Q6NXP2 309 aa5.76□□□□□ -1.49
CDC42BPA-208ENST00000442054 ZNF709Q8N972 641 aa5.76□□□□□ -1.49
CDC42BPA-208ENST00000442054 Q8N9W7 124 aa5.76□□□□□ -1.49
CDC42BPA-208ENST00000442054 ZNF430Q9H8G1 570 aaPredicted RBP5.76□□□□□ -1.49
CDC42BPA-208ENST00000442054 OSTCQ9NRP0 149 aa5.76□□□□□ -1.49
CDC42BPA-208ENST00000442054 SELENOKQ9Y6D0 94 aa5.76□□□□□ -1.49
CDC42BPA-208ENST00000442054 IGHV3OR16-8A0A075B7F1 116 aa5.75□□□□□ -1.49
CDC42BPA-208ENST00000442054 GRIFINA4D1Z8 144 aa5.75□□□□□ -1.49
CDC42BPA-208ENST00000442054 ISLRO14498 428 aa5.75□□□□□ -1.49
CDC42BPA-208ENST00000442054 ZNF207O43670 478 aaKnown RBP5.75□□□□□ -1.49
CDC42BPA-208ENST00000442054 IGHV3-48P01763 117 aa5.75□□□□□ -1.49
CDC42BPA-208ENST00000442054 GPX1P07203 203 aa5.75□□□□□ -1.49
CDC42BPA-208ENST00000442054 NPY1RP25929 384 aa5.75□□□□□ -1.49
CDC42BPA-208ENST00000442054 OR5I1Q13606 314 aa5.75□□□□□ -1.49
CDC42BPA-208ENST00000442054 IQCJQ1A5X6 159 aa5.75□□□□□ -1.49
CDC42BPA-208ENST00000442054 C8orf31Q8N9H6 132 aa5.75□□□□□ -1.49
CDC42BPA-208ENST00000442054 THAP8Q8NA92 274 aa5.75□□□□□ -1.49
CDC42BPA-208ENST00000442054 OR5AN1Q8NGI8 311 aa5.75□□□□□ -1.49
CDC42BPA-208ENST00000442054 BTF3L4Q96K17 158 aa5.75□□□□□ -1.49
CDC42BPA-208ENST00000442054 MRPL36Q9P0J6 103 aaKnown RBP5.75□□□□□ -1.49
CDC42BPA-208ENST00000442054 CBY1Q9Y3M2 126 aa5.75□□□□□ -1.49
CDC42BPA-208ENST00000442054 IGHV3-49A0A0A0MS15 119 aa5.75□□□□□ -1.49
CDC42BPA-208ENST00000442054 TRBV9A0A0B4J1U6 114 aa5.75□□□□□ -1.49
CDC42BPA-208ENST00000442054 IGHG2P01859 326 aa5.75□□□□□ -1.49
CDC42BPA-208ENST00000442054 HLA-DRB1P01911 266 aa5.75□□□□□ -1.49
CDC42BPA-208ENST00000442054 CRYGCP07315 174 aa5.75□□□□□ -1.49
CDC42BPA-208ENST00000442054 MFAP4P55083 255 aa5.75□□□□□ -1.49
CDC42BPA-208ENST00000442054 FOXE3Q13461 319 aa5.75□□□□□ -1.49
CDC42BPA-208ENST00000442054 C15orf32Q32M92 178 aa5.75□□□□□ -1.49
CDC42BPA-208ENST00000442054 MRPL18Q9H0U6 180 aaKnown RBP5.75□□□□□ -1.49
CDC42BPA-208ENST00000442054 ZNF702PQ9H963 129 aa5.75□□□□□ -1.49
CDC42BPA-208ENST00000442054 PEF1Q9UBV8 284 aaKnown RBP5.75□□□□□ -1.49
CDC42BPA-208ENST00000442054 A0A1B0GXF2 115 aa5.75□□□□□ -1.49
CDC42BPA-208ENST00000442054 BMPR1BO00238 502 aa5.75□□□□□ -1.49
CDC42BPA-208ENST00000442054 CRYGBP07316 175 aa5.75□□□□□ -1.49
CDC42BPA-208ENST00000442054 PROK1P58294 105 aa5.75□□□□□ -1.49
CDC42BPA-208ENST00000442054 FAM231DQ6ZW35 169 aa5.75□□□□□ -1.49
CDC42BPA-208ENST00000442054 USMG5Q96IX5 58 aa5.75□□□□□ -1.49
CDC42BPA-208ENST00000442054 MLST8Q9BVC4 326 aa5.75□□□□□ -1.49
CDC42BPA-208ENST00000442054 FNDC4Q9H6D8 234 aaPredicted RBP5.75□□□□□ -1.49
CDC42BPA-208ENST00000442054 OR10J1P30954 320 aa5.74□□□□□ -1.49
CDC42BPA-208ENST00000442054 ATP5IP56385 69 aaPredicted RBP5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms