RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 LEPROTL1O95214 131 aa9.29□□□□□ -0.92
CD44-209ENST00000433892 CRIP1P50238 77 aa9.29□□□□□ -0.92
CD44-209ENST00000433892 PSG3Q16557 428 aa9.29□□□□□ -0.92
CD44-209ENST00000433892 NPBQ8NG41 125 aa9.29□□□□□ -0.92
CD44-209ENST00000433892 ZNF414Q96IQ9 312 aa9.29□□□□□ -0.92
CD44-209ENST00000433892 TPPP3Q9BW30 176 aa9.29□□□□□ -0.92
CD44-209ENST00000433892 RAB1BQ9H0U4 201 aa9.29□□□□□ -0.92
CD44-209ENST00000433892 RNF24Q9Y225 148 aa9.29□□□□□ -0.92
CD44-209ENST00000433892 ZFP30Q9Y2G7 519 aa9.29□□□□□ -0.92
CD44-209ENST00000433892 MED13LQ71F56 2210 aa9.28□□□□□ -0.92
CD44-209ENST00000433892 LOC105371242A0A075B767 164 aa9.28□□□□□ -0.92
CD44-209ENST00000433892 TRBV6-1A0A0K0K1D8 114 aa9.28□□□□□ -0.92
CD44-209ENST00000433892 WI2-2373I1.2A0A1W2PRP0 233 aa9.28□□□□□ -0.92
CD44-209ENST00000433892 K7EQM0 130 aa9.28□□□□□ -0.92
CD44-209ENST00000433892 CSN3P07498 182 aa9.28□□□□□ -0.92
CD44-209ENST00000433892 CEACAM3P40198 252 aa9.28□□□□□ -0.92
CD44-209ENST00000433892 HINT1P49773 126 aaPredicted RBP9.28□□□□□ -0.92
CD44-209ENST00000433892 GAGE1Q13065 139 aa9.28□□□□□ -0.92
CD44-209ENST00000433892 C5orf64Q2M2E5 130 aa9.28□□□□□ -0.92
CD44-209ENST00000433892 FBXL19-AS1Q494R0 122 aa9.28□□□□□ -0.92
CD44-209ENST00000433892 TIMD4Q96H15 378 aa9.28□□□□□ -0.92
CD44-209ENST00000433892 FANCD2OSQ96PS1 177 aa9.28□□□□□ -0.92
CD44-209ENST00000433892 ZFHX3Q15911 3703 aa9.28□□□□□ -0.92
CD44-209ENST00000433892 OR4C46A6NHA9 309 aa9.28□□□□□ -0.92
CD44-209ENST00000433892 SYS1-DBNDD2H3BUS1 97 aa9.28□□□□□ -0.92
CD44-209ENST00000433892 IGHV3-23P01764 117 aa9.28□□□□□ -0.92
CD44-209ENST00000433892 LYPD1Q8N2G4 141 aa9.28□□□□□ -0.92
CD44-209ENST00000433892 WNK2Q9Y3S1 2297 aa9.28□□□□□ -0.92
CD44-209ENST00000433892 NCBP2LA6PVI3 153 aaKnown RBP9.27□□□□□ -0.93
CD44-209ENST00000433892 CRXO43186 299 aaPredicted RBP9.27□□□□□ -0.93
CD44-209ENST00000433892 NDPQ00604 133 aa9.27□□□□□ -0.93
CD44-209ENST00000433892 C8orf49Q96NF6 230 aa9.27□□□□□ -0.93
CD44-209ENST00000433892 TP73-AS1Q9UF72 201 aa9.27□□□□□ -0.93
CD44-209ENST00000433892 TIMM8BQ9Y5J9 83 aaPredicted RBP9.27□□□□□ -0.93
CD44-209ENST00000433892 IGLV11-55A0A075B6I3 123 aa9.26□□□□□ -0.93
CD44-209ENST00000433892 C20orf202A1L168 122 aa9.26□□□□□ -0.93
CD44-209ENST00000433892 ODF3BA8MYP8 253 aa9.26□□□□□ -0.93
CD44-209ENST00000433892 NDUFB8O95169 186 aa9.26□□□□□ -0.93
CD44-209ENST00000433892 PRTN3P24158 256 aa9.26□□□□□ -0.93
CD44-209ENST00000433892 MFAP4P55083 255 aa9.26□□□□□ -0.93
CD44-209ENST00000433892 DYNAPQ8N1N2 210 aa9.26□□□□□ -0.93
CD44-209ENST00000433892 ARPC1AQ92747 370 aa9.26□□□□□ -0.93
CD44-209ENST00000433892 MCRIP2Q9BUT9 160 aaKnown RBP9.26□□□□□ -0.93
CD44-209ENST00000433892 TMUB1Q9BVT8 246 aa9.26□□□□□ -0.93
CD44-209ENST00000433892 MRPS16Q9Y3D3 137 aaKnown RBP9.26□□□□□ -0.93
CD44-209ENST00000433892 F8W735 103 aaPredicted RBP9.26□□□□□ -0.93
CD44-209ENST00000433892 H0Y8G0 127 aa9.26□□□□□ -0.93
CD44-209ENST00000433892 RIGQ13278 110 aa9.26□□□□□ -0.93
CD44-209ENST00000433892 ZNF562Q6V9R5 426 aa9.26□□□□□ -0.93
CD44-209ENST00000433892 SPTBN1Q01082 2364 aaKnown RBP9.25□□□□□ -0.93
CD44-209ENST00000433892 TRAV30A0A087WSZ9 112 aa9.25□□□□□ -0.93
CD44-209ENST00000433892 TMSB15BA0A087X1C1 80 aa9.25□□□□□ -0.93
CD44-209ENST00000433892 hDV102S1A0JD36 115 aa9.25□□□□□ -0.93
CD44-209ENST00000433892 M0R1W7 72 aa9.25□□□□□ -0.93
CD44-209ENST00000433892 AAMDCQ9H7C9 122 aa9.25□□□□□ -0.93
CD44-209ENST00000433892 VPS13CQ709C8 3753 aa9.25□□□□□ -0.93
CD44-209ENST00000433892 OR2T8A6NH00 312 aa9.25□□□□□ -0.93
CD44-209ENST00000433892 NPIPB5A8MRT5 1133 aa9.25□□□□□ -0.93
CD44-209ENST00000433892 CT45A10P0DMU9 189 aa9.25□□□□□ -0.93
CD44-209ENST00000433892 ADORA2A-AS1P86434 159 aa9.25□□□□□ -0.93
CD44-209ENST00000433892 Q6ZVH6 145 aa9.25□□□□□ -0.93
CD44-209ENST00000433892 NEU4Q8WWR8 484 aaPredicted RBP9.25□□□□□ -0.93
CD44-209ENST00000433892 C21orf62Q9NYP8 219 aa9.25□□□□□ -0.93
CD44-209ENST00000433892 C1RLQ9NZP8 487 aa9.25□□□□□ -0.93
CD44-209ENST00000433892 CACNA1BQ00975 2339 aa9.24□□□□□ -0.93
CD44-209ENST00000433892 VMO1Q7Z5L0 202 aa9.24□□□□□ -0.93
CD44-209ENST00000433892 MAP1LC3CQ9BXW4 147 aa9.24□□□□□ -0.93
CD44-209ENST00000433892 COL6A6A6NMZ7 2263 aa9.24□□□□□ -0.93
CD44-209ENST00000433892 IGKV2-40A0A087WW87 121 aaPredicted RBP9.24□□□□□ -0.93
CD44-209ENST00000433892 IGKV2D-40P01614 121 aaPredicted RBP9.24□□□□□ -0.93
CD44-209ENST00000433892 OR5AL1P0C617 328 aa9.24□□□□□ -0.93
CD44-209ENST00000433892 PDE6HQ13956 83 aa9.24□□□□□ -0.93
CD44-209ENST00000433892 TTC9CQ8N5M4 171 aa9.24□□□□□ -0.93
CD44-209ENST00000433892 IGHV3OR16-8A0A075B7F1 116 aa9.23□□□□□ -0.93
CD44-209ENST00000433892 CSN1S1P47710 185 aa9.23□□□□□ -0.93
CD44-209ENST00000433892 DMRTA1Q5VZB9 504 aa9.23□□□□□ -0.93
CD44-209ENST00000433892 C11orf71Q6IPW1 123 aa9.23□□□□□ -0.93
CD44-209ENST00000433892 UNQ5815/PRO19632Q6UWF5 114 aa9.23□□□□□ -0.93
CD44-209ENST00000433892 S100A7AQ86SG5 101 aa9.23□□□□□ -0.93
CD44-209ENST00000433892 TMEM190Q8WZ59 177 aa9.23□□□□□ -0.93
CD44-209ENST00000433892 PMCHL2Q9BQD1 86 aa9.23□□□□□ -0.93
CD44-209ENST00000433892 AP5S1Q9NUS5 200 aa9.23□□□□□ -0.93
CD44-209ENST00000433892 CELSR1Q9NYQ6 3014 aa9.23□□□□□ -0.93
CD44-209ENST00000433892 IGHV3-35A0A0C4DH35 117 aa9.22□□□□□ -0.93
CD44-209ENST00000433892 MUC21A0A0G2JKD1 596 aa9.22□□□□□ -0.93
CD44-209ENST00000433892 MUC21A0A140T8X8 626 aa9.22□□□□□ -0.93
CD44-209ENST00000433892 SERTM2A0A1B0GWG4 89 aa9.22□□□□□ -0.93
CD44-209ENST00000433892 ZFP36P26651 326 aaKnown RBP9.22□□□□□ -0.93
CD44-209ENST00000433892 MUC21Q5SSG8 566 aa9.22□□□□□ -0.93
CD44-209ENST00000433892 IGFL4Q6B9Z1 124 aa9.22□□□□□ -0.93
CD44-209ENST00000433892 LYZL1Q6UWQ5 148 aa9.22□□□□□ -0.93
CD44-209ENST00000433892 TMEM191AQ9H0A3 160 aa9.22□□□□□ -0.93
CD44-209ENST00000433892 ST20Q9HBF5 79 aa9.22□□□□□ -0.93
CD44-209ENST00000433892 HSPB8Q9UJY1 196 aa9.22□□□□□ -0.93
CD44-209ENST00000433892 TMEM213A2RRL7 107 aa9.22□□□□□ -0.93
CD44-209ENST00000433892 SH2D1AO60880 128 aa9.22□□□□□ -0.93
CD44-209ENST00000433892 Q6AWC8 147 aa9.22□□□□□ -0.93
CD44-209ENST00000433892 CCDC144NLQ6NUI1 221 aa9.22□□□□□ -0.93
CD44-209ENST00000433892 PRSS3P2Q8NHM4 247 aa9.22□□□□□ -0.93
CD44-209ENST00000433892 ZNF48Q96MX3 618 aaPredicted RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms