RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 ZNF816-ZNF321PA0A0X1KG74 233 aa3.59□□□□□ -1.83
SF3B1-202ENST00000409915 hADV38S2A0JD32 116 aa3.59□□□□□ -1.83
SF3B1-202ENST00000409915 ODAMA1E959 279 aa3.59□□□□□ -1.83
SF3B1-202ENST00000409915 TMEM212A6NML5 194 aa3.59□□□□□ -1.83
SF3B1-202ENST00000409915 ZNF736B4DX44 427 aaPredicted RBP3.59□□□□□ -1.83
SF3B1-202ENST00000409915 H3BRM9 83 aa3.59□□□□□ -1.83
SF3B1-202ENST00000409915 M0R1X1 148 aa3.59□□□□□ -1.83
SF3B1-202ENST00000409915 DHRS3O75911 302 aa3.59□□□□□ -1.83
SF3B1-202ENST00000409915 CCL1P22362 96 aa3.59□□□□□ -1.83
SF3B1-202ENST00000409915 MDH2P40926 338 aaKnown RBP3.59□□□□□ -1.83
SF3B1-202ENST00000409915 GALR1P47211 349 aa3.59□□□□□ -1.83
SF3B1-202ENST00000409915 LMO4P61968 165 aa3.59□□□□□ -1.83
SF3B1-202ENST00000409915 CCL20P78556 96 aa3.59□□□□□ -1.83
SF3B1-202ENST00000409915 HLA-DRB5Q30154 266 aa3.59□□□□□ -1.83
SF3B1-202ENST00000409915 FAM120AOSQ5T036 256 aa3.59□□□□□ -1.83
SF3B1-202ENST00000409915 ZNF880Q6PDB4 577 aa3.59□□□□□ -1.83
SF3B1-202ENST00000409915 LYPD2Q6UXB3 125 aa3.59□□□□□ -1.83
SF3B1-202ENST00000409915 FA2HQ7L5A8 372 aa3.59□□□□□ -1.83
SF3B1-202ENST00000409915 SGPP2Q8IWX5 399 aa3.59□□□□□ -1.83
SF3B1-202ENST00000409915 TTC9CQ8N5M4 171 aa3.59□□□□□ -1.83
SF3B1-202ENST00000409915 DEFB108BQ8NET1 73 aa3.59□□□□□ -1.83
SF3B1-202ENST00000409915 LRRC29Q8WV35 223 aa3.59□□□□□ -1.83
SF3B1-202ENST00000409915 MBD3L1Q8WWY6 194 aa3.59□□□□□ -1.83
SF3B1-202ENST00000409915 IL22RA2Q969J5 263 aa3.59□□□□□ -1.83
SF3B1-202ENST00000409915 ADAT3Q96EY9 351 aaPredicted RBP3.59□□□□□ -1.83
SF3B1-202ENST00000409915 ADTRPQ96IZ2 230 aa3.59□□□□□ -1.83
SF3B1-202ENST00000409915 ZNF488Q96MN9 340 aa3.59□□□□□ -1.83
SF3B1-202ENST00000409915 SCGB3A2Q96PL1 93 aa3.59□□□□□ -1.83
SF3B1-202ENST00000409915 RCHY1Q96PM5 261 aa3.59□□□□□ -1.83
SF3B1-202ENST00000409915 PDCD1LG2Q9BQ51 273 aa3.59□□□□□ -1.83
SF3B1-202ENST00000409915 DERL1Q9BUN8 251 aa3.59□□□□□ -1.83
SF3B1-202ENST00000409915 WDR61Q9GZS3 305 aaKnown RBP3.59□□□□□ -1.83
SF3B1-202ENST00000409915 MANBALQ9NQG1 85 aa3.59□□□□□ -1.83
SF3B1-202ENST00000409915 SS18L2Q9UHA2 77 aa3.59□□□□□ -1.83
SF3B1-202ENST00000409915 DYSFO75923 2080 aa3.58□□□□□ -1.84
SF3B1-202ENST00000409915 CENPVL3A0A0U1RRI6 287 aa3.58□□□□□ -1.84
SF3B1-202ENST00000409915 KIR2DS1A0A191URI9 304 aa3.58□□□□□ -1.84
SF3B1-202ENST00000409915 A6NDN8 102 aa3.58□□□□□ -1.84
SF3B1-202ENST00000409915 F5H768 121 aa3.58□□□□□ -1.84
SF3B1-202ENST00000409915 TMEM250H0YL14 139 aa3.58□□□□□ -1.84
SF3B1-202ENST00000409915 J3QLI3 93 aa3.58□□□□□ -1.84
SF3B1-202ENST00000409915 PHF1O43189 567 aaPredicted RBP3.58□□□□□ -1.84
SF3B1-202ENST00000409915 ZNF207O43670 478 aaKnown RBP3.58□□□□□ -1.84
SF3B1-202ENST00000409915 BUB3O43684 328 aa3.58□□□□□ -1.84
SF3B1-202ENST00000409915 SYNGR1O43759 233 aa3.58□□□□□ -1.84
SF3B1-202ENST00000409915 FOXH1O75593 365 aa3.58□□□□□ -1.84
SF3B1-202ENST00000409915 CYB5AP00167 134 aa3.58□□□□□ -1.84
SF3B1-202ENST00000409915 GYPAP02724 150 aa3.58□□□□□ -1.84
SF3B1-202ENST00000409915 ZNF728P0DKX0 622 aa3.58□□□□□ -1.84
SF3B1-202ENST00000409915 ZNF20P17024 532 aa3.58□□□□□ -1.84
SF3B1-202ENST00000409915 GNG3P63215 75 aa3.58□□□□□ -1.84
SF3B1-202ENST00000409915 KIR2DS1Q14954 304 aa3.58□□□□□ -1.84
SF3B1-202ENST00000409915 ODF3L2Q3SX64 289 aa3.58□□□□□ -1.84
SF3B1-202ENST00000409915 OR10J3Q5JRS4 329 aa3.58□□□□□ -1.84
SF3B1-202ENST00000409915 VAX1Q5SQQ9 334 aa3.58□□□□□ -1.84
SF3B1-202ENST00000409915 TMEM78Q5T7P6 136 aa3.58□□□□□ -1.84
SF3B1-202ENST00000409915 Q6YL49 198 aa3.58□□□□□ -1.84
SF3B1-202ENST00000409915 C11orf53Q8IXP5 236 aa3.58□□□□□ -1.84
SF3B1-202ENST00000409915 SMIM20Q8N5G0 67 aa3.58□□□□□ -1.84
SF3B1-202ENST00000409915 ZNF676Q8N7Q3 588 aa3.58□□□□□ -1.84
SF3B1-202ENST00000409915 OR10P1Q8NGE3 313 aa3.58□□□□□ -1.84
SF3B1-202ENST00000409915 C18orf32Q8TCD1 76 aa3.58□□□□□ -1.84
SF3B1-202ENST00000409915 BLNKQ8WV28 456 aa3.58□□□□□ -1.84
SF3B1-202ENST00000409915 PP6455Q8WZ26 134 aa3.58□□□□□ -1.84
SF3B1-202ENST00000409915 OR5P3Q8WZ94 311 aa3.58□□□□□ -1.84
SF3B1-202ENST00000409915 GNPNAT1Q96EK6 184 aaPredicted RBP3.58□□□□□ -1.84
SF3B1-202ENST00000409915 WWC2-AS2Q96NR7 200 aa3.58□□□□□ -1.84
SF3B1-202ENST00000409915 SPACA5Q96QH8 159 aa3.58□□□□□ -1.84
SF3B1-202ENST00000409915 SPIN2AQ99865 258 aa3.58□□□□□ -1.84
SF3B1-202ENST00000409915 SPIN2BQ9BPZ2 258 aa3.58□□□□□ -1.84
SF3B1-202ENST00000409915 PMCHL2Q9BQD1 86 aa3.58□□□□□ -1.84
SF3B1-202ENST00000409915 NDFIP1Q9BT67 221 aa3.58□□□□□ -1.84
SF3B1-202ENST00000409915 RTL8AQ9BWD3 113 aa3.58□□□□□ -1.84
SF3B1-202ENST00000409915 COMMD5Q9GZQ3 224 aa3.58□□□□□ -1.84
SF3B1-202ENST00000409915 PPDPFQ9H3Y8 114 aa3.58□□□□□ -1.84
SF3B1-202ENST00000409915 C11orf1Q9H5F2 150 aa3.58□□□□□ -1.84
SF3B1-202ENST00000409915 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.58□□□□□ -1.84
SF3B1-202ENST00000409915 KCNIP1Q9NZI2 227 aa3.58□□□□□ -1.84
SF3B1-202ENST00000409915 RNF7Q9UBF6 113 aa3.58□□□□□ -1.84
SF3B1-202ENST00000409915 CTSZQ9UBR2 303 aa3.58□□□□□ -1.84
SF3B1-202ENST00000409915 SIGLEC9Q9Y336 463 aa3.58□□□□□ -1.84
SF3B1-202ENST00000409915 MPC1Q9Y5U8 109 aa3.58□□□□□ -1.84
SF3B1-202ENST00000409915 MALRD1Q5VYJ5 2156 aa3.58□□□□□ -1.84
SF3B1-202ENST00000409915 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.58□□□□□ -1.842e-8■■■■■ 29.3
SF3B1-202ENST00000409915 C2CD3Q4AC94 2353 aa3.58□□□□□ -1.84
SF3B1-202ENST00000409915 IGKV1-27A0A075B6S5 117 aa3.57□□□□□ -1.84
SF3B1-202ENST00000409915 IGKV1-9A0A0C4DH69 117 aa3.57□□□□□ -1.84
SF3B1-202ENST00000409915 DUXBA0A1W2PPF3 345 aa3.57□□□□□ -1.84
SF3B1-202ENST00000409915 SLC17A2O00624 439 aa3.57□□□□□ -1.84
SF3B1-202ENST00000409915 CRXO43186 299 aaPredicted RBP3.57□□□□□ -1.84
SF3B1-202ENST00000409915 KBTBD11O94819 623 aa3.57□□□□□ -1.84
SF3B1-202ENST00000409915 PRH1P02810 166 aa3.57□□□□□ -1.84
SF3B1-202ENST00000409915 MSMBP08118 114 aa3.57□□□□□ -1.84
SF3B1-202ENST00000409915 WNT2P09544 360 aa3.57□□□□□ -1.84
SF3B1-202ENST00000409915 BCL2P10415 239 aa3.57□□□□□ -1.84
SF3B1-202ENST00000409915 BCL3P20749 454 aa3.57□□□□□ -1.84
SF3B1-202ENST00000409915 IL3RAP26951 378 aa3.57□□□□□ -1.84
SF3B1-202ENST00000409915 GPR183P32249 361 aa3.57□□□□□ -1.84
SF3B1-202ENST00000409915 TAS2R46P59540 309 aa3.57□□□□□ -1.84
SF3B1-202ENST00000409915 SUPT4H1P63272 117 aaKnown RBP3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms