RNA–Protein interactions for RNA: ENST00000377453.8

CLN5-201, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLN5, Length 2,629 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-201ENST00000377453 SNAI2O43623 268 aa16.04■□□□□ 0.16
CLN5-201ENST00000377453 MPV17L2Q567V2 206 aa16.04■□□□□ 0.16
CLN5-201ENST00000377453 PSG8Q9UQ74 426 aa16.04■□□□□ 0.16
CLN5-201ENST00000377453 MRPS16Q9Y3D3 137 aaKnown RBP16.04■□□□□ 0.16
CLN5-201ENST00000377453 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.03■□□□□ 0.16
CLN5-201ENST00000377453 IGHV3-35A0A0C4DH35 117 aa16.03■□□□□ 0.16
CLN5-201ENST00000377453 HES1Q14469 280 aa16.03■□□□□ 0.16
CLN5-201ENST00000377453 CDSNQ15517 529 aa16.03■□□□□ 0.16
CLN5-201ENST00000377453 ZNF491Q8N8L2 437 aa16.03■□□□□ 0.16
CLN5-201ENST00000377453 SHANK2-AS3Q9BTD1 123 aa16.03■□□□□ 0.16
CLN5-201ENST00000377453 C21orf62-AS1Q17RA5 79 aa16.03■□□□□ 0.16
CLN5-201ENST00000377453 B9A039 149 aa16.02■□□□□ 0.16
CLN5-201ENST00000377453 NCR2O95944 276 aa16.02■□□□□ 0.16
CLN5-201ENST00000377453 LOXL1Q08397 574 aaPredicted RBP16.02■□□□□ 0.16
CLN5-201ENST00000377453 ZNF672Q499Z4 452 aaPredicted RBP16.02■□□□□ 0.16
CLN5-201ENST00000377453 RNF125Q96EQ8 232 aa16.02■□□□□ 0.16
CLN5-201ENST00000377453 TMEM14CQ9P0S9 112 aa16.02■□□□□ 0.16
CLN5-201ENST00000377453 NCOR2Q9Y618 2525 aa16.02■□□□□ 0.16
CLN5-201ENST00000377453 LOC389332A0A1B0GUA5 103 aa16.02■□□□□ 0.15
CLN5-201ENST00000377453 LY6LH3BQJ8 138 aa16.02■□□□□ 0.15
CLN5-201ENST00000377453 H3BRN7 92 aa16.02■□□□□ 0.15
CLN5-201ENST00000377453 PTTG1IPP53801 180 aa16.02■□□□□ 0.15
CLN5-201ENST00000377453 BPIFA4PQ86YQ2 179 aa16.02■□□□□ 0.15
CLN5-201ENST00000377453 GFRA4Q9GZZ7 299 aa16.02■□□□□ 0.15
CLN5-201ENST00000377453 HAX1O00165 279 aa16.01■□□□□ 0.15
CLN5-201ENST00000377453 HOXB4P17483 251 aaPredicted RBP16.01■□□□□ 0.15
CLN5-201ENST00000377453 TNFRSF14Q92956 283 aa16.01■□□□□ 0.15
CLN5-201ENST00000377453 WNK2Q9Y3S1 2297 aa16.01■□□□□ 0.15
CLN5-201ENST00000377453 A0A1B0GUT8 65 aa16.01■□□□□ 0.15
CLN5-201ENST00000377453 TMEM213A2RRL7 107 aa16.01■□□□□ 0.15
CLN5-201ENST00000377453 CHCHD1Q96BP2 118 aaKnown RBP16.01■□□□□ 0.15
CLN5-201ENST00000377453 HRNRQ86YZ3 2850 aaPredicted RBP16■□□□□ 0.15
CLN5-201ENST00000377453 SERTM2A0A1B0GWG4 89 aa16■□□□□ 0.15
CLN5-201ENST00000377453 C20orf202A1L168 122 aa16■□□□□ 0.15
CLN5-201ENST00000377453 COX11Q9Y6N1 276 aa16■□□□□ 0.15
CLN5-201ENST00000377453 IGKV2-40A0A087WW87 121 aaPredicted RBP16■□□□□ 0.15
CLN5-201ENST00000377453 IGKV2D-40P01614 121 aaPredicted RBP16■□□□□ 0.15
CLN5-201ENST00000377453 NDPQ00604 133 aa16■□□□□ 0.15
CLN5-201ENST00000377453 NDFIP1Q9BT67 221 aa16■□□□□ 0.15
CLN5-201ENST00000377453 SOX21Q9Y651 276 aaPredicted RBP16■□□□□ 0.15
CLN5-201ENST00000377453 C16orf54Q6UWD8 224 aa15.99■□□□□ 0.15
CLN5-201ENST00000377453 NEU4Q8WWR8 484 aaPredicted RBP15.99■□□□□ 0.15
CLN5-201ENST00000377453 ZNF414Q96IQ9 312 aa15.99■□□□□ 0.15
CLN5-201ENST00000377453 HLA-DMBP28068 263 aa15.99■□□□□ 0.15
CLN5-201ENST00000377453 PSG3Q16557 428 aa15.99■□□□□ 0.15
CLN5-201ENST00000377453 MRPS12O15235 138 aaKnown RBP15.98■□□□□ 0.15
CLN5-201ENST00000377453 NUDT3O95989 172 aa15.98■□□□□ 0.15
CLN5-201ENST00000377453 DYNAPQ8N1N2 210 aa15.98■□□□□ 0.15
CLN5-201ENST00000377453 Q8TAT8 98 aa15.98■□□□□ 0.15
CLN5-201ENST00000377453 NBR2O15453 112 aa15.98■□□□□ 0.15
CLN5-201ENST00000377453 CRXO43186 299 aaPredicted RBP15.98■□□□□ 0.15
CLN5-201ENST00000377453 GNG7O60262 68 aa15.98■□□□□ 0.15
CLN5-201ENST00000377453 A0A087X0K7 114 aa15.97■□□□□ 0.15
CLN5-201ENST00000377453 IFI27P40305 119 aaPredicted RBP15.97■□□□□ 0.15
CLN5-201ENST00000377453 RNASE8Q8TDE3 154 aaKnown RBP15.97■□□□□ 0.15
CLN5-201ENST00000377453 MAP1LC3CQ9BXW4 147 aa15.97■□□□□ 0.15
CLN5-201ENST00000377453 ZFHX3Q15911 3703 aa15.97■□□□□ 0.15
CLN5-201ENST00000377453 SMKR1H3BMG3 65 aa15.97■□□□□ 0.15
CLN5-201ENST00000377453 LIPFP07098 398 aa15.97■□□□□ 0.15
CLN5-201ENST00000377453 PAX2Q02962 417 aa15.97■□□□□ 0.15
CLN5-201ENST00000377453 TMEM75Q8N9X5 138 aa15.97■□□□□ 0.15
CLN5-201ENST00000377453 ORAOV1Q8WV07 137 aa15.97■□□□□ 0.15
CLN5-201ENST00000377453 CFHR4Q92496 578 aa15.97■□□□□ 0.15
CLN5-201ENST00000377453 FANCD2OSQ96PS1 177 aa15.97■□□□□ 0.15
CLN5-201ENST00000377453 C1RLQ9NZP8 487 aa15.97■□□□□ 0.15
CLN5-201ENST00000377453 LYZL1Q6UWQ5 148 aa15.96■□□□□ 0.15
CLN5-201ENST00000377453 AMN1Q8IY45 258 aa15.96■□□□□ 0.15
CLN5-201ENST00000377453 NCBP2LA6PVI3 153 aaKnown RBP15.96■□□□□ 0.14
CLN5-201ENST00000377453 F8W735 103 aaPredicted RBP15.96■□□□□ 0.14
CLN5-201ENST00000377453 TMEM191AQ9H0A3 160 aa15.96■□□□□ 0.14
CLN5-201ENST00000377453 OR2T8A6NH00 312 aa15.95■□□□□ 0.14
CLN5-201ENST00000377453 D6R8Y8 96 aa15.95■□□□□ 0.14
CLN5-201ENST00000377453 ZNF738Q8NE65 137 aa15.95■□□□□ 0.14
CLN5-201ENST00000377453 PRSS3P2Q8NHM4 247 aa15.95■□□□□ 0.14
CLN5-201ENST00000377453 CBY3A6NI87 242 aa15.95■□□□□ 0.14
CLN5-201ENST00000377453 OR5AL1P0C617 328 aa15.95■□□□□ 0.14
CLN5-201ENST00000377453 RIGQ13278 110 aa15.95■□□□□ 0.14
CLN5-201ENST00000377453 OR8A1Q8NGG7 326 aa15.95■□□□□ 0.14
CLN5-201ENST00000377453 AP5S1Q9NUS5 200 aa15.95■□□□□ 0.14
CLN5-201ENST00000377453 DPM3Q9P2X0 92 aa15.95■□□□□ 0.14
CLN5-201ENST00000377453 FAM231BA6NCW3 169 aa15.94■□□□□ 0.14
CLN5-201ENST00000377453 ST20Q9HBF5 79 aa15.94■□□□□ 0.14
CLN5-201ENST00000377453 AKAP6Q13023 2319 aa15.94■□□□□ 0.14
CLN5-201ENST00000377453 FAM162BQ5T6X4 162 aa15.94■□□□□ 0.14
CLN5-201ENST00000377453 SLC25A34Q6PIV7 304 aa15.94■□□□□ 0.14
CLN5-201ENST00000377453 WFDC3Q8IUB2 231 aa15.94■□□□□ 0.14
CLN5-201ENST00000377453 SCRT2Q9NQ03 307 aa15.94■□□□□ 0.14
CLN5-201ENST00000377453 COL6A6A6NMZ7 2263 aa15.93■□□□□ 0.14
CLN5-201ENST00000377453 SH2D1AO60880 128 aa15.93■□□□□ 0.14
CLN5-201ENST00000377453 FA2HQ7L5A8 372 aa15.93■□□□□ 0.14
CLN5-201ENST00000377453 LOC105371242A0A075B767 164 aa15.93■□□□□ 0.14
CLN5-201ENST00000377453 WI2-2373I1.2A0A1W2PRP0 233 aa15.93■□□□□ 0.14
CLN5-201ENST00000377453 SELENOKQ9Y6D0 94 aa15.93■□□□□ 0.14
CLN5-201ENST00000377453 A0A096LNJ9 63 aa15.92■□□□□ 0.14
CLN5-201ENST00000377453 UBE2V1Q13404 147 aa15.92■□□□□ 0.14
CLN5-201ENST00000377453 BVES-AS1Q5T3Y7 98 aa15.92■□□□□ 0.14
CLN5-201ENST00000377453 HSBP1L1C9JCN9 74 aa15.92■□□□□ 0.14
CLN5-201ENST00000377453 ZNF80P51504 273 aaPredicted RBP15.92■□□□□ 0.14
CLN5-201ENST00000377453 VAMP3Q15836 100 aa15.92■□□□□ 0.14
CLN5-201ENST00000377453 VGLL1Q99990 258 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms