RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 PHRF1Q9P1Y6 1649 aaKnown RBP5.33□□□□□ -1.56
UBR4-204ENST00000375254 LINC01619G3V211 115 aa5.33□□□□□ -1.56
UBR4-204ENST00000375254 KIAA1210Q9ULL0 1709 aa5.33□□□□□ -1.56
UBR4-204ENST00000375254 CCL3P10147 92 aa5.33□□□□□ -1.56
UBR4-204ENST00000375254 LINC00694P0DN24 101 aa5.33□□□□□ -1.56
UBR4-204ENST00000375254 CDC42BPAQ5VT25 1732 aa5.33□□□□□ -1.56
UBR4-204ENST00000375254 IGKV3OR2-268A0A0C4DH90 116 aa5.33□□□□□ -1.56
UBR4-204ENST00000375254 APELAP0DMC3 54 aa5.33□□□□□ -1.56
UBR4-204ENST00000375254 Q86TA4 180 aa5.33□□□□□ -1.56
UBR4-204ENST00000375254 PATE1Q8WXA2 126 aa5.33□□□□□ -1.56
UBR4-204ENST00000375254 YPEL4Q96NS1 127 aa5.33□□□□□ -1.56
UBR4-204ENST00000375254 CYYR1Q96J86 154 aa5.33□□□□□ -1.56
UBR4-204ENST00000375254 AGPAT4-IT1Q9H0P7 198 aa5.33□□□□□ -1.56
UBR4-204ENST00000375254 HIST2H2BCQ6DN03 193 aa5.33□□□□□ -1.56
UBR4-204ENST00000375254 HIST2H2BDQ6DRA6 164 aa5.33□□□□□ -1.56
UBR4-204ENST00000375254 MRPL53Q96EL3 112 aaKnown RBP5.33□□□□□ -1.56
UBR4-204ENST00000375254 SHANK1Q9Y566 2161 aa5.33□□□□□ -1.56
UBR4-204ENST00000375254 TIMM17BO60830 172 aa5.32□□□□□ -1.56
UBR4-204ENST00000375254 PPRC1Q5VV67 1664 aaKnown RBP5.32□□□□□ -1.56
UBR4-204ENST00000375254 KIF1BO60333 1816 aa5.32□□□□□ -1.56
UBR4-204ENST00000375254 CTRLP40313 264 aa5.32□□□□□ -1.56
UBR4-204ENST00000375254 PRR25Q96S07 402 aa5.32□□□□□ -1.56
UBR4-204ENST00000375254 TP53TG1Q9Y2A0 90 aa5.32□□□□□ -1.56
UBR4-204ENST00000375254 TINCRA0A1B0GVN0 87 aa5.32□□□□□ -1.56
UBR4-204ENST00000375254 DOCK8Q8NF50 2099 aa5.32□□□□□ -1.56
UBR4-204ENST00000375254 K7ERS5 55 aa5.32□□□□□ -1.56
UBR4-204ENST00000375254 RPL18AQ02543 176 aaKnown RBP5.32□□□□□ -1.56
UBR4-204ENST00000375254 ZNF503Q96F45 646 aa5.32□□□□□ -1.56
UBR4-204ENST00000375254 EIF4EBP1Q13541 118 aaPredicted RBP5.32□□□□□ -1.56
UBR4-204ENST00000375254 Q6ZT83 130 aa5.32□□□□□ -1.56
UBR4-204ENST00000375254 IGKV3D-7A0A0C4DH55 119 aa5.32□□□□□ -1.56
UBR4-204ENST00000375254 CRYGBP07316 175 aa5.32□□□□□ -1.56
UBR4-204ENST00000375254 UFSP1Q6NVU6 142 aa5.32□□□□□ -1.56
UBR4-204ENST00000375254 F8WDY8 70 aa5.32□□□□□ -1.56
UBR4-204ENST00000375254 IGHV3-48P01763 117 aa5.32□□□□□ -1.56
UBR4-204ENST00000375254 TRGV3P03979 118 aa5.32□□□□□ -1.56
UBR4-204ENST00000375254 LILRA6Q6PI73 481 aa5.32□□□□□ -1.56
UBR4-204ENST00000375254 IGHV3-72A0A0B4J1Y9 119 aa5.32□□□□□ -1.56
UBR4-204ENST00000375254 H0Y8X5 98 aa5.32□□□□□ -1.56
UBR4-204ENST00000375254 TP73-AS1Q9UF72 201 aa5.32□□□□□ -1.56
UBR4-204ENST00000375254 ATP5J2P56134 94 aa5.32□□□□□ -1.56
UBR4-204ENST00000375254 FAM201AQ5SY85 155 aa5.32□□□□□ -1.56
UBR4-204ENST00000375254 TOMM6Q96B49 74 aa5.32□□□□□ -1.56
UBR4-204ENST00000375254 RETNQ9HD89 108 aa5.32□□□□□ -1.56
UBR4-204ENST00000375254 C16orf47Q6ZP98 133 aaPredicted RBP5.31□□□□□ -1.56
UBR4-204ENST00000375254 RS1O15537 224 aa5.31□□□□□ -1.56
UBR4-204ENST00000375254 CLEC19AQ6UXS0 136 aa5.31□□□□□ -1.56
UBR4-204ENST00000375254 SSC4DQ8WTU2 575 aa5.31□□□□□ -1.56
UBR4-204ENST00000375254 ETV2O00321 342 aaPredicted RBP5.31□□□□□ -1.56
UBR4-204ENST00000375254 MINOS1Q5TGZ0 78 aa5.31□□□□□ -1.56
UBR4-204ENST00000375254 C9orf139Q6ZV77 190 aa5.31□□□□□ -1.56
UBR4-204ENST00000375254 MINOS1-NBL1R4GNA1 71 aa5.31□□□□□ -1.56
UBR4-204ENST00000375254 IGHV1-45A0A0A0MS14 117 aa5.31□□□□□ -1.56
UBR4-204ENST00000375254 BCE1O60756 84 aa5.31□□□□□ -1.56
UBR4-204ENST00000375254 IGKV3D-20A0A0C4DH25 116 aa5.31□□□□□ -1.56
UBR4-204ENST00000375254 NDUFS5O43920 106 aa5.31□□□□□ -1.56
UBR4-204ENST00000375254 SIGLEC15Q6ZMC9 328 aa5.31□□□□□ -1.56
UBR4-204ENST00000375254 VPREB3Q9UKI3 123 aa5.31□□□□□ -1.56
UBR4-204ENST00000375254 C2orf70A6NJV1 201 aa5.31□□□□□ -1.56
UBR4-204ENST00000375254 ZNF524Q96C55 264 aa5.31□□□□□ -1.56
UBR4-204ENST00000375254 SDK2Q58EX2 2172 aa5.31□□□□□ -1.56
UBR4-204ENST00000375254 IGHV3-64A0A075B6Q5 118 aa5.31□□□□□ -1.56
UBR4-204ENST00000375254 A0A0U1RQV1 116 aa5.31□□□□□ -1.56
UBR4-204ENST00000375254 IGKV3D-11A0A0A0MRZ8 115 aa5.31□□□□□ -1.56
UBR4-204ENST00000375254 SAA2P0DJI9 122 aaPredicted RBP5.31□□□□□ -1.56
UBR4-204ENST00000375254 UPK3BQ9BT76 320 aa5.31□□□□□ -1.56
UBR4-204ENST00000375254 CCL4P13236 92 aa5.3□□□□□ -1.56
UBR4-204ENST00000375254 LMO1P25800 156 aa5.3□□□□□ -1.56
UBR4-204ENST00000375254 ZNF501Q96CX3 271 aaPredicted RBP5.3□□□□□ -1.56
UBR4-204ENST00000375254 TIMM17AQ99595 171 aa5.3□□□□□ -1.56
UBR4-204ENST00000375254 ROS1P08922 2347 aa5.3□□□□□ -1.56
UBR4-204ENST00000375254 FAM223BA6NKX1 122 aa5.3□□□□□ -1.56
UBR4-204ENST00000375254 FAM223AQ8IWN6 122 aa5.3□□□□□ -1.56
UBR4-204ENST00000375254 NKAPP1Q8N9T2 125 aa5.3□□□□□ -1.56
UBR4-204ENST00000375254 ZDBF2Q9HCK1 2354 aa5.3□□□□□ -1.56
UBR4-204ENST00000375254 NACAE9PAV3 2078 aa5.3□□□□□ -1.56
UBR4-204ENST00000375254 GFRALQ6UXV0 394 aa5.3□□□□□ -1.56
UBR4-204ENST00000375254 LOC107984640A0A0U1RRK4 108 aa5.3□□□□□ -1.56
UBR4-204ENST00000375254 SDHAF1A6NFY7 115 aa5.3□□□□□ -1.56
UBR4-204ENST00000375254 IGKV3D-15A0A087WSY6 115 aa5.3□□□□□ -1.56
UBR4-204ENST00000375254 IGKV3-15P01624 115 aa5.3□□□□□ -1.56
UBR4-204ENST00000375254 CCDC179H3BU77 68 aa5.3□□□□□ -1.56
UBR4-204ENST00000375254 CXCL6P80162 114 aa5.3□□□□□ -1.56
UBR4-204ENST00000375254 COL9A2Q14055 689 aaPredicted RBP5.3□□□□□ -1.56
UBR4-204ENST00000375254 C11orf44Q8N8P7 122 aa5.3□□□□□ -1.56
UBR4-204ENST00000375254 TCL1BO95988 128 aa5.3□□□□□ -1.56
UBR4-204ENST00000375254 PRSS12P56730 875 aa5.3□□□□□ -1.56
UBR4-204ENST00000375254 PRR20EP86478 221 aa5.3□□□□□ -1.56
UBR4-204ENST00000375254 PRR20CP86479 221 aa5.3□□□□□ -1.56
UBR4-204ENST00000375254 PRR20DP86480 221 aa5.3□□□□□ -1.56
UBR4-204ENST00000375254 PRR20BP86481 221 aa5.3□□□□□ -1.56
UBR4-204ENST00000375254 PRR20AP86496 221 aa5.3□□□□□ -1.56
UBR4-204ENST00000375254 NDUFA4L2Q9NRX3 87 aa5.3□□□□□ -1.56
UBR4-204ENST00000375254 ITLN1Q8WWA0 313 aa5.3□□□□□ -1.56
UBR4-204ENST00000375254 ZFP36L1Q07352 338 aaKnown RBP5.29□□□□□ -1.56
UBR4-204ENST00000375254 IGKV2-40A0A087WW87 121 aaPredicted RBP5.29□□□□□ -1.56
UBR4-204ENST00000375254 K7EN84 100 aa5.29□□□□□ -1.56
UBR4-204ENST00000375254 IGKV2D-40P01614 121 aaPredicted RBP5.29□□□□□ -1.56
UBR4-204ENST00000375254 DYNAPQ8N1N2 210 aa5.29□□□□□ -1.56
UBR4-204ENST00000375254 A0A0U1RRA0 63 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms