RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 TRAV30A0A087WSZ9 112 aa12.47□□□□□ -0.41
CNKSR1-202ENST00000374253 TPPP2P59282 170 aa12.47□□□□□ -0.41
CNKSR1-202ENST00000374253 PKIAP61925 76 aa12.47□□□□□ -0.41
CNKSR1-202ENST00000374253 RHOGP84095 191 aa12.47□□□□□ -0.41
CNKSR1-202ENST00000374253 FAM19A2Q8N3H0 131 aa12.47□□□□□ -0.41
CNKSR1-202ENST00000374253 ZC2HC1AQ96GY0 325 aa12.47□□□□□ -0.41
CNKSR1-202ENST00000374253 C19orf71A6NCJ1 209 aa12.46□□□□□ -0.41
CNKSR1-202ENST00000374253 ZNF785A8K8V0 405 aa12.46□□□□□ -0.41
CNKSR1-202ENST00000374253 ZNF705FA8MVS1 300 aaPredicted RBP12.46□□□□□ -0.41
CNKSR1-202ENST00000374253 TSTD3H0UI37 97 aa12.46□□□□□ -0.41
CNKSR1-202ENST00000374253 ZNF705DP0CH99 300 aaPredicted RBP12.46□□□□□ -0.41
CNKSR1-202ENST00000374253 ZNF705BP0CI00 300 aaPredicted RBP12.46□□□□□ -0.41
CNKSR1-202ENST00000374253 FBN2P35556 2912 aa12.46□□□□□ -0.41
CNKSR1-202ENST00000374253 CLEC3BP05452 202 aa12.46□□□□□ -0.42
CNKSR1-202ENST00000374253 HLA-DMBP28068 263 aa12.46□□□□□ -0.42
CNKSR1-202ENST00000374253 DDTP30046 118 aa12.46□□□□□ -0.42
CNKSR1-202ENST00000374253 Q0VG73 95 aa12.46□□□□□ -0.42
CNKSR1-202ENST00000374253 PRSS22Q9GZN4 317 aa12.46□□□□□ -0.42
CNKSR1-202ENST00000374253 IGHV3-49A0A0A0MS15 119 aa12.45□□□□□ -0.42
CNKSR1-202ENST00000374253 ATP5J2P56134 94 aa12.45□□□□□ -0.42
CNKSR1-202ENST00000374253 DEFA6Q01524 100 aa12.45□□□□□ -0.42
CNKSR1-202ENST00000374253 C8orf49Q96NF6 230 aa12.45□□□□□ -0.42
CNKSR1-202ENST00000374253 EPG5Q9HCE0 2579 aa12.45□□□□□ -0.42
CNKSR1-202ENST00000374253 IGHV4-30-2A0A087WSY4 118 aa12.45□□□□□ -0.42
CNKSR1-202ENST00000374253 TDRG1Q3Y452 100 aa12.45□□□□□ -0.42
CNKSR1-202ENST00000374253 NAGKQ9UJ70 344 aa12.45□□□□□ -0.42
CNKSR1-202ENST00000374253 PSG8Q9UQ74 426 aa12.45□□□□□ -0.42
CNKSR1-202ENST00000374253 IGKV2-40A0A087WW87 121 aaPredicted RBP12.44□□□□□ -0.42
CNKSR1-202ENST00000374253 ZNF207O43670 478 aaKnown RBP12.44□□□□□ -0.42
CNKSR1-202ENST00000374253 IGKV2D-40P01614 121 aaPredicted RBP12.44□□□□□ -0.42
CNKSR1-202ENST00000374253 IGHV4-38-2P0DP08 117 aa12.44□□□□□ -0.42
CNKSR1-202ENST00000374253 AMTP48728 403 aa12.44□□□□□ -0.42
CNKSR1-202ENST00000374253 LY6EQ16553 131 aa12.44□□□□□ -0.42
CNKSR1-202ENST00000374253 CLEC19AQ6UXS0 136 aa12.44□□□□□ -0.42
CNKSR1-202ENST00000374253 A0A1W2PS18 150 aa12.44□□□□□ -0.42
CNKSR1-202ENST00000374253 DIRC3C9JPN6 131 aa12.44□□□□□ -0.42
CNKSR1-202ENST00000374253 NTF3P20783 257 aa12.44□□□□□ -0.42
CNKSR1-202ENST00000374253 FOXA3P55318 350 aaPredicted RBP12.44□□□□□ -0.42
CNKSR1-202ENST00000374253 TOMM20LQ6UXN7 152 aa12.44□□□□□ -0.42
CNKSR1-202ENST00000374253 PIMREGQ9BSJ6 248 aa12.44□□□□□ -0.42
CNKSR1-202ENST00000374253 TPPP3Q9BW30 176 aa12.44□□□□□ -0.42
CNKSR1-202ENST00000374253 ABCA12Q86UK0 2595 aa12.44□□□□□ -0.42
CNKSR1-202ENST00000374253 ANKRD17O75179 2603 aaKnown RBP12.43□□□□□ -0.42
CNKSR1-202ENST00000374253 A8MWL6 223 aa12.43□□□□□ -0.42
CNKSR1-202ENST00000374253 DNLZQ5SXM8 178 aa12.43□□□□□ -0.42
CNKSR1-202ENST00000374253 SIGLECL1Q8N7X8 197 aa12.43□□□□□ -0.42
CNKSR1-202ENST00000374253 FAM110DQ8TAY7 271 aaPredicted RBP12.43□□□□□ -0.42
CNKSR1-202ENST00000374253 C18orf32Q8TCD1 76 aa12.43□□□□□ -0.42
CNKSR1-202ENST00000374253 C14orf144Q96I85 54 aa12.43□□□□□ -0.42
CNKSR1-202ENST00000374253 POLR3KQ9Y2Y1 108 aaPredicted RBP12.43□□□□□ -0.42
CNKSR1-202ENST00000374253 TMSB15BA0A087X1C1 80 aa12.43□□□□□ -0.42
CNKSR1-202ENST00000374253 M0QZ24 198 aa12.43□□□□□ -0.42
CNKSR1-202ENST00000374253 PAX1P15863 534 aa12.43□□□□□ -0.42
CNKSR1-202ENST00000374253 KRTDAPP60985 99 aa12.43□□□□□ -0.42
CNKSR1-202ENST00000374253 RABAC1Q9UI14 185 aa12.43□□□□□ -0.42
CNKSR1-202ENST00000374253 SMAD5-AS1Q9Y6J3 95 aa12.43□□□□□ -0.42
CNKSR1-202ENST00000374253 GPX1P07203 203 aa12.42□□□□□ -0.42
CNKSR1-202ENST00000374253 CRIP1P50238 77 aa12.42□□□□□ -0.42
CNKSR1-202ENST00000374253 PSG3Q16557 428 aa12.42□□□□□ -0.42
CNKSR1-202ENST00000374253 COX19Q49B96 90 aa12.42□□□□□ -0.42
CNKSR1-202ENST00000374253 C5orf56Q8N8D9 126 aa12.42□□□□□ -0.42
CNKSR1-202ENST00000374253 Q8TAT8 98 aa12.42□□□□□ -0.42
CNKSR1-202ENST00000374253 VN1R17PQ8TDU5 208 aa12.42□□□□□ -0.42
CNKSR1-202ENST00000374253 SMIM12Q96EX1 92 aa12.42□□□□□ -0.42
CNKSR1-202ENST00000374253 ZNF48Q96MX3 618 aaPredicted RBP12.42□□□□□ -0.42
CNKSR1-202ENST00000374253 AAMDCQ9H7C9 122 aa12.42□□□□□ -0.42
CNKSR1-202ENST00000374253 ZNF492Q9P255 531 aa12.42□□□□□ -0.42
CNKSR1-202ENST00000374253 ESDP10768 282 aa12.42□□□□□ -0.42
CNKSR1-202ENST00000374253 PAFAH1B2P68402 229 aa12.42□□□□□ -0.42
CNKSR1-202ENST00000374253 PAX8Q06710 450 aa12.42□□□□□ -0.42
CNKSR1-202ENST00000374253 ZNF502Q8TBZ5 544 aa12.42□□□□□ -0.42
CNKSR1-202ENST00000374253 C10orf105Q8TEF2 133 aa12.42□□□□□ -0.42
CNKSR1-202ENST00000374253 WIPF2Q8TF74 440 aaPredicted RBP12.42□□□□□ -0.42
CNKSR1-202ENST00000374253 KCNS1Q96KK3 526 aa12.42□□□□□ -0.42
CNKSR1-202ENST00000374253 CCDC140Q96MF4 163 aa12.42□□□□□ -0.42
CNKSR1-202ENST00000374253 PTPN13Q12923 2485 aa12.42□□□□□ -0.42
CNKSR1-202ENST00000374253 A0A1B0GXF2 115 aa12.41□□□□□ -0.42
CNKSR1-202ENST00000374253 FOSL1P15407 271 aa12.41□□□□□ -0.42
CNKSR1-202ENST00000374253 HBBP68871 147 aa12.41□□□□□ -0.42
CNKSR1-202ENST00000374253 OR10J3Q5JRS4 329 aa12.41□□□□□ -0.42
CNKSR1-202ENST00000374253 TMEM75Q8N9X5 138 aa12.41□□□□□ -0.42
CNKSR1-202ENST00000374253 IGHV1-69DA0A0B4J2H0 117 aa12.4□□□□□ -0.42
CNKSR1-202ENST00000374253 MUC21A0A0G2JKD1 596 aa12.4□□□□□ -0.42
CNKSR1-202ENST00000374253 MUC21A0A140T8X8 626 aa12.4□□□□□ -0.42
CNKSR1-202ENST00000374253 K7EQM0 130 aa12.4□□□□□ -0.42
CNKSR1-202ENST00000374253 IGHV1-69P01742 117 aa12.4□□□□□ -0.42
CNKSR1-202ENST00000374253 APOHP02749 345 aaPredicted RBP12.4□□□□□ -0.42
CNKSR1-202ENST00000374253 MUC21Q5SSG8 566 aa12.4□□□□□ -0.42
CNKSR1-202ENST00000374253 CLEC2AQ6UVW9 174 aa12.4□□□□□ -0.42
CNKSR1-202ENST00000374253 PIFOQ8TCI5 191 aa12.4□□□□□ -0.42
CNKSR1-202ENST00000374253 NRN1Q9NPD7 142 aa12.4□□□□□ -0.42
CNKSR1-202ENST00000374253 RNF24Q9Y225 148 aa12.4□□□□□ -0.42
CNKSR1-202ENST00000374253 A8MWP6 167 aa12.4□□□□□ -0.42
CNKSR1-202ENST00000374253 RBPMS2Q6ZRY4 209 aaKnown RBP12.4□□□□□ -0.42
CNKSR1-202ENST00000374253 RPL7P18124 248 aaKnown RBP12.39□□□□□ -0.43
CNKSR1-202ENST00000374253 RNASEKQ6P5S7 137 aaKnown RBP12.39□□□□□ -0.43
CNKSR1-202ENST00000374253 RNF182Q8N6D2 247 aa12.39□□□□□ -0.43
CNKSR1-202ENST00000374253 ALKBH7Q9BT30 221 aaPredicted RBP12.39□□□□□ -0.43
CNKSR1-202ENST00000374253 NPIPB6E9PJ23 425 aa12.39□□□□□ -0.43
CNKSR1-202ENST00000374253 ZNF324O75467 553 aaPredicted RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms