RNA–Protein interactions for RNA: ENST00000371122.8

SMARCA1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCA1, Length 4,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-202ENST00000371122 OSTCQ9NRP0 149 aa7.35□□□□□ -1.23
SMARCA1-202ENST00000371122 COL5A1P20908 1838 aaPredicted RBP7.35□□□□□ -1.23
SMARCA1-202ENST00000371122 TRAV1-1A0A0B4J248 108 aa7.35□□□□□ -1.23
SMARCA1-202ENST00000371122 BUB1B-PAK6H3BSN5 160 aa7.35□□□□□ -1.23
SMARCA1-202ENST00000371122 LEPP41159 167 aa7.35□□□□□ -1.23
SMARCA1-202ENST00000371122 LYPD6Q86Y78 171 aa7.35□□□□□ -1.23
SMARCA1-202ENST00000371122 C11orf53Q8IXP5 236 aa7.35□□□□□ -1.23
SMARCA1-202ENST00000371122 ORMDL3Q8N138 153 aa7.35□□□□□ -1.23
SMARCA1-202ENST00000371122 NEU4Q8WWR8 484 aaPredicted RBP7.35□□□□□ -1.23
SMARCA1-202ENST00000371122 NDUFAF3Q9BU61 184 aa7.35□□□□□ -1.23
SMARCA1-202ENST00000371122 LAMTOR2Q9Y2Q5 125 aa7.35□□□□□ -1.23
SMARCA1-202ENST00000371122 PRRC2AP48634 2157 aaKnown RBP7.35□□□□□ -1.23
SMARCA1-202ENST00000371122 TRBV6-6A0A0A6YYG2 114 aa7.34□□□□□ -1.23
SMARCA1-202ENST00000371122 IGLV3-1P01715 115 aa7.34□□□□□ -1.23
SMARCA1-202ENST00000371122 LINC00477Q96M19 166 aa7.34□□□□□ -1.23
SMARCA1-202ENST00000371122 GGTLC3B5MD39 225 aa7.34□□□□□ -1.23
SMARCA1-202ENST00000371122 D6R8Y8 96 aa7.34□□□□□ -1.23
SMARCA1-202ENST00000371122 F2Z2F3 143 aa7.34□□□□□ -1.23
SMARCA1-202ENST00000371122 RNASE1P07998 156 aaKnown RBP7.34□□□□□ -1.23
SMARCA1-202ENST00000371122 CFPP27918 469 aa7.34□□□□□ -1.23
SMARCA1-202ENST00000371122 MSMPQ1L6U9 139 aa7.34□□□□□ -1.23
SMARCA1-202ENST00000371122 C3orf36Q3SXR2 165 aa7.34□□□□□ -1.23
SMARCA1-202ENST00000371122 LYZL1Q6UWQ5 148 aa7.34□□□□□ -1.23
SMARCA1-202ENST00000371122 AMN1Q8IY45 258 aa7.34□□□□□ -1.23
SMARCA1-202ENST00000371122 BOD1L1Q8NFC6 3051 aa7.34□□□□□ -1.23
SMARCA1-202ENST00000371122 C8orf46Q8TAG6 207 aa7.34□□□□□ -1.23
SMARCA1-202ENST00000371122 TMEM167AQ8TBQ9 72 aa7.34□□□□□ -1.23
SMARCA1-202ENST00000371122 FABP5P3A8MUU1 101 aa7.34□□□□□ -1.23
SMARCA1-202ENST00000371122 C3orf79P0CE67 100 aa7.34□□□□□ -1.23
SMARCA1-202ENST00000371122 SAA4P35542 130 aa7.34□□□□□ -1.23
SMARCA1-202ENST00000371122 HERVK_113P61574 105 aa7.34□□□□□ -1.23
SMARCA1-202ENST00000371122 TMEM249Q2WGJ8 235 aa7.34□□□□□ -1.23
SMARCA1-202ENST00000371122 PLA2G2CQ5R387 149 aa7.34□□□□□ -1.23
SMARCA1-202ENST00000371122 TMEM75Q8N9X5 138 aa7.34□□□□□ -1.23
SMARCA1-202ENST00000371122 ZNF257Q9Y2Q1 563 aa7.34□□□□□ -1.23
SMARCA1-202ENST00000371122 C5orf64Q2M2E5 130 aa7.33□□□□□ -1.24
SMARCA1-202ENST00000371122 C12orf54Q6X4T0 127 aa7.33□□□□□ -1.24
SMARCA1-202ENST00000371122 OTORQ9NRC9 128 aa7.33□□□□□ -1.24
SMARCA1-202ENST00000371122 ANAPC10Q9UM13 185 aa7.33□□□□□ -1.24
SMARCA1-202ENST00000371122 C15orf65H3BRN8 121 aa7.33□□□□□ -1.24
SMARCA1-202ENST00000371122 H3BUT2 72 aa7.33□□□□□ -1.24
SMARCA1-202ENST00000371122 PFN1P07737 140 aaKnown RBP7.33□□□□□ -1.24
SMARCA1-202ENST00000371122 LOXP28300 417 aaPredicted RBP7.33□□□□□ -1.24
SMARCA1-202ENST00000371122 TPTE2P1Q5T6R2 138 aa7.33□□□□□ -1.24
SMARCA1-202ENST00000371122 FMC1Q96HJ9 113 aa7.33□□□□□ -1.24
SMARCA1-202ENST00000371122 C17orf77Q96MU5 243 aa7.33□□□□□ -1.24
SMARCA1-202ENST00000371122 SCGB3A1Q96QR1 104 aa7.33□□□□□ -1.24
SMARCA1-202ENST00000371122 FNDC4Q9H6D8 234 aaPredicted RBP7.33□□□□□ -1.24
SMARCA1-202ENST00000371122 TRBV9A0A0B4J1U6 114 aa7.33□□□□□ -1.24
SMARCA1-202ENST00000371122 A0A1B0GWJ7 208 aa7.33□□□□□ -1.24
SMARCA1-202ENST00000371122 CIDEAO60543 219 aa7.33□□□□□ -1.24
SMARCA1-202ENST00000371122 ARMS2P0C7Q2 107 aa7.33□□□□□ -1.24
SMARCA1-202ENST00000371122 HTN3P15516 51 aa7.33□□□□□ -1.24
SMARCA1-202ENST00000371122 PLP1P60201 277 aa7.33□□□□□ -1.24
SMARCA1-202ENST00000371122 TSKUQ8WUA8 353 aa7.33□□□□□ -1.24
SMARCA1-202ENST00000371122 TMEM213A2RRL7 107 aa7.32□□□□□ -1.24
SMARCA1-202ENST00000371122 FCN3O75636 299 aa7.32□□□□□ -1.24
SMARCA1-202ENST00000371122 LMO1P25800 156 aa7.32□□□□□ -1.24
SMARCA1-202ENST00000371122 PSMG4Q5JS54 123 aa7.32□□□□□ -1.24
SMARCA1-202ENST00000371122 AMMECR1LQ6DCA0 310 aa7.32□□□□□ -1.24
SMARCA1-202ENST00000371122 DKK4Q9UBT3 224 aa7.32□□□□□ -1.24
SMARCA1-202ENST00000371122 A0A087X0K7 114 aa7.32□□□□□ -1.24
SMARCA1-202ENST00000371122 OR11H12B2RN74 326 aa7.32□□□□□ -1.24
SMARCA1-202ENST00000371122 HLA-DMBP28068 263 aa7.32□□□□□ -1.24
SMARCA1-202ENST00000371122 ATP5IP56385 69 aaPredicted RBP7.32□□□□□ -1.24
SMARCA1-202ENST00000371122 SRSF7Q16629 238 aaKnown RBP eCLIP7.32□□□□□ -1.24
SMARCA1-202ENST00000371122 TMEM30BQ3MIR4 351 aa7.32□□□□□ -1.24
SMARCA1-202ENST00000371122 Q6ZS49 121 aa7.32□□□□□ -1.24
SMARCA1-202ENST00000371122 LURAP1LQ8IV03 231 aa7.32□□□□□ -1.24
SMARCA1-202ENST00000371122 OR11H1Q8NG94 326 aa7.32□□□□□ -1.24
SMARCA1-202ENST00000371122 OR11H2Q8NH07 326 aa7.32□□□□□ -1.24
SMARCA1-202ENST00000371122 ZNF418Q8TF45 676 aaPredicted RBP7.32□□□□□ -1.24
SMARCA1-202ENST00000371122 SVEP1Q4LDE5 3571 aa7.32□□□□□ -1.24
SMARCA1-202ENST00000371122 EREGO14944 169 aa7.32□□□□□ -1.24
SMARCA1-202ENST00000371122 NDUFB8O95169 186 aa7.32□□□□□ -1.24
SMARCA1-202ENST00000371122 RPL13AP40429 203 aaKnown RBP7.32□□□□□ -1.24
SMARCA1-202ENST00000371122 VDAC2P45880 294 aaPredicted RBP7.32□□□□□ -1.24
SMARCA1-202ENST00000371122 Q6ZPA2 131 aa7.32□□□□□ -1.24
SMARCA1-202ENST00000371122 KIR2DL4Q99706 377 aa7.32□□□□□ -1.24
SMARCA1-202ENST00000371122 MIEN1Q9BRT3 115 aa7.32□□□□□ -1.24
SMARCA1-202ENST00000371122 TOMM7Q9P0U1 55 aa7.32□□□□□ -1.24
SMARCA1-202ENST00000371122 FRMD6-AS1P0C7T7 363 aa7.32□□□□□ -1.24
SMARCA1-202ENST00000371122 FABP2P12104 132 aa7.32□□□□□ -1.24
SMARCA1-202ENST00000371122 PCP4P48539 62 aa7.32□□□□□ -1.24
SMARCA1-202ENST00000371122 SNRPD3P62318 126 aaKnown RBP7.32□□□□□ -1.24
SMARCA1-202ENST00000371122 MORN5Q5VZ52 161 aa7.32□□□□□ -1.24
SMARCA1-202ENST00000371122 C22orf34Q6ZV56 151 aa7.32□□□□□ -1.24
SMARCA1-202ENST00000371122 RITA1Q96K30 269 aa7.32□□□□□ -1.24
SMARCA1-202ENST00000371122 NHP2Q9NX24 153 aaKnown RBP7.32□□□□□ -1.24
SMARCA1-202ENST00000371122 CTSZQ9UBR2 303 aa7.32□□□□□ -1.24
SMARCA1-202ENST00000371122 CFHR2P36980 270 aa7.31□□□□□ -1.24
SMARCA1-202ENST00000371122 ASIPP42127 132 aa7.31□□□□□ -1.24
SMARCA1-202ENST00000371122 PAX8Q06710 450 aa7.31□□□□□ -1.24
SMARCA1-202ENST00000371122 RRN3P1Q2M238 152 aa7.31□□□□□ -1.24
SMARCA1-202ENST00000371122 DUX3Q96PT4 197 aa7.31□□□□□ -1.24
SMARCA1-202ENST00000371122 TCF15Q12870 199 aa7.31□□□□□ -1.24
SMARCA1-202ENST00000371122 CD300EQ496F6 205 aaPredicted RBP7.31□□□□□ -1.24
SMARCA1-202ENST00000371122 Q6ZVH6 145 aa7.31□□□□□ -1.24
SMARCA1-202ENST00000371122 GTSCR1Q86UQ5 136 aa7.31□□□□□ -1.24
SMARCA1-202ENST00000371122 STPG4Q8N801 248 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 106.9 ms