RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 WIPF3A6NGB9 483 aa7.98□□□□□ -1.13
COL4A6-201ENST00000334504 LYNX1G3V0Z9 82 aa7.98□□□□□ -1.13
COL4A6-201ENST00000334504 LYNX1P0DP58 116 aa7.98□□□□□ -1.13
COL4A6-201ENST00000334504 LINC00205P59089 165 aa7.98□□□□□ -1.13
COL4A6-201ENST00000334504 ZNF492Q9P255 531 aa7.98□□□□□ -1.13
COL4A6-201ENST00000334504 IGLC7A0M8Q6 106 aa7.98□□□□□ -1.13
COL4A6-201ENST00000334504 SPTBP11277 2137 aa7.98□□□□□ -1.13
COL4A6-201ENST00000334504 FAM104BQ5XKR9 115 aa7.98□□□□□ -1.13
COL4A6-201ENST00000334504 ZNF581Q9P0T4 197 aa7.98□□□□□ -1.13
COL4A6-201ENST00000334504 VWC2Q2TAL6 325 aa7.98□□□□□ -1.13
COL4A6-201ENST00000334504 C2orf66Q6UXQ4 117 aa7.98□□□□□ -1.13
COL4A6-201ENST00000334504 RBBP6Q7Z6E9 1792 aaKnown RBP7.98□□□□□ -1.13
COL4A6-201ENST00000334504 C9orf139Q6ZV77 190 aa7.98□□□□□ -1.13
COL4A6-201ENST00000334504 PRSS46E5RG02 174 aa7.97□□□□□ -1.13
COL4A6-201ENST00000334504 SS18Q15532 418 aa7.97□□□□□ -1.13
COL4A6-201ENST00000334504 C12orf74Q32Q52 190 aa7.97□□□□□ -1.13
COL4A6-201ENST00000334504 NDUFC2O95298 119 aa7.97□□□□□ -1.13
COL4A6-201ENST00000334504 IGHG3P01860 377 aa7.97□□□□□ -1.13
COL4A6-201ENST00000334504 PRB1P04280 392 aa7.97□□□□□ -1.13
COL4A6-201ENST00000334504 COL11A2P13942 1736 aaPredicted RBP7.97□□□□□ -1.13
COL4A6-201ENST00000334504 IGHV1-18A0A0C4DH31 117 aa7.97□□□□□ -1.13
COL4A6-201ENST00000334504 MRPL51Q4U2R6 128 aaKnown RBP7.97□□□□□ -1.13
COL4A6-201ENST00000334504 TRPT1Q86TN4 253 aaKnown RBP7.97□□□□□ -1.13
COL4A6-201ENST00000334504 PSPNO60542 156 aa7.97□□□□□ -1.13
COL4A6-201ENST00000334504 HLA-DRB4P13762 266 aa7.97□□□□□ -1.13
COL4A6-201ENST00000334504 RPL35AP18077 110 aaKnown RBP7.97□□□□□ -1.13
COL4A6-201ENST00000334504 QRFPP83859 136 aa7.97□□□□□ -1.13
COL4A6-201ENST00000334504 HLA-DRB4X5D2U9 266 aa7.97□□□□□ -1.13
COL4A6-201ENST00000334504 BRWD3Q6RI45 1802 aa7.97□□□□□ -1.13
COL4A6-201ENST00000334504 TRAV25A0A0B4J276 109 aa7.97□□□□□ -1.13
COL4A6-201ENST00000334504 IGHV1-3A0A0C4DH29 117 aa7.97□□□□□ -1.13
COL4A6-201ENST00000334504 CRLF1O75462 422 aa7.97□□□□□ -1.13
COL4A6-201ENST00000334504 TAL2Q16559 108 aa7.97□□□□□ -1.13
COL4A6-201ENST00000334504 Q6ZRM9 215 aa7.97□□□□□ -1.13
COL4A6-201ENST00000334504 TMEM75Q8N9X5 138 aa7.97□□□□□ -1.13
COL4A6-201ENST00000334504 PRSS22Q9GZN4 317 aa7.97□□□□□ -1.13
COL4A6-201ENST00000334504 HOXD3P31249 432 aaPredicted RBP7.96□□□□□ -1.13
COL4A6-201ENST00000334504 PFN2P35080 140 aa7.96□□□□□ -1.13
COL4A6-201ENST00000334504 TMEM200BQ69YZ2 307 aa7.96□□□□□ -1.13
COL4A6-201ENST00000334504 CD177Q8N6Q3 437 aa7.96□□□□□ -1.13
COL4A6-201ENST00000334504 RNASE8Q8TDE3 154 aaKnown RBP7.96□□□□□ -1.13
COL4A6-201ENST00000334504 SSC4DQ8WTU2 575 aa7.96□□□□□ -1.13
COL4A6-201ENST00000334504 V9GYV3 84 aa7.96□□□□□ -1.13
COL4A6-201ENST00000334504 TRAV26-2A0A0B4J265 109 aa7.96□□□□□ -1.13
COL4A6-201ENST00000334504 SMIM27A0A1W2PRY6 76 aa7.96□□□□□ -1.13
COL4A6-201ENST00000334504 H0YJW9 148 aa7.96□□□□□ -1.13
COL4A6-201ENST00000334504 YPEL3P61236 119 aaPredicted RBP7.96□□□□□ -1.13
COL4A6-201ENST00000334504 IL17RELQ6ZVW7 336 aa7.96□□□□□ -1.13
COL4A6-201ENST00000334504 MRPS18CQ9Y3D5 142 aaKnown RBP7.96□□□□□ -1.13
COL4A6-201ENST00000334504 IGHG4P01861 327 aa7.96□□□□□ -1.14
COL4A6-201ENST00000334504 GNLYP22749 145 aa7.96□□□□□ -1.14
COL4A6-201ENST00000334504 DTX1Q86Y01 620 aa7.96□□□□□ -1.14
COL4A6-201ENST00000334504 C5orf63A6NC05 138 aa7.96□□□□□ -1.14
COL4A6-201ENST00000334504 SAP30O75446 220 aa7.96□□□□□ -1.14
COL4A6-201ENST00000334504 IGHV1-46P01743 117 aa7.96□□□□□ -1.14
COL4A6-201ENST00000334504 FOXG1P55316 489 aaPredicted RBP7.96□□□□□ -1.14
COL4A6-201ENST00000334504 POU2AF1Q16633 256 aa7.96□□□□□ -1.14
COL4A6-201ENST00000334504 DSCR8Q96T75 97 aa7.96□□□□□ -1.14
COL4A6-201ENST00000334504 CGB3P0DN86 165 aa7.96□□□□□ -1.14
COL4A6-201ENST00000334504 RNASE2P10153 161 aaKnown RBP7.96□□□□□ -1.14
COL4A6-201ENST00000334504 HLA-DMBP28068 263 aa7.96□□□□□ -1.14
COL4A6-201ENST00000334504 MRPL35Q9NZE8 188 aaKnown RBP7.95□□□□□ -1.14
COL4A6-201ENST00000334504 KLF2Q9Y5W3 355 aaPredicted RBP7.95□□□□□ -1.14
COL4A6-201ENST00000334504 SIVA1O15304 175 aa7.95□□□□□ -1.14
COL4A6-201ENST00000334504 ZNF726P1Q15940 193 aa7.95□□□□□ -1.14
COL4A6-201ENST00000334504 IGHV2-70DA0A0C4DH43 119 aa7.95□□□□□ -1.14
COL4A6-201ENST00000334504 KLRD1Q13241 179 aa7.95□□□□□ -1.14
COL4A6-201ENST00000334504 SIGLEC8Q9NYZ4 499 aa7.95□□□□□ -1.14
COL4A6-201ENST00000334504 SVILO95425 2214 aa7.95□□□□□ -1.14
COL4A6-201ENST00000334504 SH2D6Q7Z4S9 175 aa7.95□□□□□ -1.14
COL4A6-201ENST00000334504 GBF1Q92538 1859 aa7.94□□□□□ -1.14
COL4A6-201ENST00000334504 IGHV1-8P0DP01 117 aa7.94□□□□□ -1.14
COL4A6-201ENST00000334504 TMEM219Q86XT9 240 aa7.94□□□□□ -1.14
COL4A6-201ENST00000334504 PRSS47A8MTI9 375 aa7.94□□□□□ -1.14
COL4A6-201ENST00000334504 ASPHD1Q5U4P2 390 aa7.94□□□□□ -1.14
COL4A6-201ENST00000334504 MAPK1IP1LQ8NDC0 245 aa7.94□□□□□ -1.14
COL4A6-201ENST00000334504 SHANK2-AS3Q9BTD1 123 aa7.94□□□□□ -1.14
COL4A6-201ENST00000334504 TRBV7-1A0A0A6YYK4 115 aa7.94□□□□□ -1.14
COL4A6-201ENST00000334504 J3KT08 172 aa7.94□□□□□ -1.14
COL4A6-201ENST00000334504 DKK1O94907 266 aa7.94□□□□□ -1.14
COL4A6-201ENST00000334504 VMO1Q7Z5L0 202 aa7.94□□□□□ -1.14
COL4A6-201ENST00000334504 TMEM243Q9BU79 118 aa7.94□□□□□ -1.14
COL4A6-201ENST00000334504 DKK2Q9UBU2 259 aa7.94□□□□□ -1.14
COL4A6-201ENST00000334504 TRIOBPQ9H2D6 2365 aa7.94□□□□□ -1.14
COL4A6-201ENST00000334504 UNC13CQ8NB66 2214 aa7.94□□□□□ -1.14
COL4A6-201ENST00000334504 FNDC10F2Z333 226 aa7.94□□□□□ -1.14
COL4A6-201ENST00000334504 CSRP2Q16527 193 aa7.94□□□□□ -1.14
COL4A6-201ENST00000334504 UBE2E2Q96LR5 201 aa7.94□□□□□ -1.14
COL4A6-201ENST00000334504 SCRT2Q9NQ03 307 aa7.94□□□□□ -1.14
COL4A6-201ENST00000334504 NDUFA12Q9UI09 145 aa7.94□□□□□ -1.14
COL4A6-201ENST00000334504 TEX48A0A1B0GUV7 120 aa7.93□□□□□ -1.14
COL4A6-201ENST00000334504 SHISA9B4DS77 424 aa7.93□□□□□ -1.14
COL4A6-201ENST00000334504 ZNF236Q9UL36 1845 aa7.93□□□□□ -1.14
COL4A6-201ENST00000334504 I3L3M4 83 aa7.93□□□□□ -1.14
COL4A6-201ENST00000334504 Q6P435 159 aa7.93□□□□□ -1.14
COL4A6-201ENST00000334504 PNRC2Q9NPJ4 139 aaKnown RBP7.93□□□□□ -1.14
COL4A6-201ENST00000334504 COL5A3P25940 1745 aaPredicted RBP7.93□□□□□ -1.14
COL4A6-201ENST00000334504 TRBV6-6A0A0A6YYG2 114 aa7.93□□□□□ -1.14
COL4A6-201ENST00000334504 KIR2DL5BA0A0G2JN68 375 aa7.93□□□□□ -1.14
COL4A6-201ENST00000334504 KIR2DL5BA0A0G2JPC4 375 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms