RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 TMEM108Q6UXF1 575 aa3.79□□□□□ -1.8
PTPN13-201ENST00000316707 Q8N8P6 123 aa3.79□□□□□ -1.8
PTPN13-201ENST00000316707 NAA38Q9BRA0 125 aaKnown RBP3.79□□□□□ -1.8
PTPN13-201ENST00000316707 ZNF785A8K8V0 405 aa3.79□□□□□ -1.8
PTPN13-201ENST00000316707 K7EMI3 77 aa3.79□□□□□ -1.8
PTPN13-201ENST00000316707 FCGR2BP31994 310 aaPredicted RBP3.79□□□□□ -1.8
PTPN13-201ENST00000316707 FXYD2P54710 66 aa3.79□□□□□ -1.8
PTPN13-201ENST00000316707 NUP37Q8NFH4 326 aa3.79□□□□□ -1.8
PTPN13-201ENST00000316707 RPEQ96AT9 228 aa3.79□□□□□ -1.8
PTPN13-201ENST00000316707 ASCL2Q99929 193 aa3.79□□□□□ -1.8
PTPN13-201ENST00000316707 SIGLEC9Q9Y336 463 aa3.79□□□□□ -1.8
PTPN13-201ENST00000316707 NPYP01303 97 aa3.79□□□□□ -1.8
PTPN13-201ENST00000316707 IGLC6P0CF74 106 aa3.79□□□□□ -1.8
PTPN13-201ENST00000316707 SSBP2P81877 361 aaPredicted RBP3.79□□□□□ -1.8
PTPN13-201ENST00000316707 ODF1Q14990 250 aa3.79□□□□□ -1.8
PTPN13-201ENST00000316707 PAPPA-AS1Q5QFB9 102 aa3.79□□□□□ -1.8
PTPN13-201ENST00000316707 EXOC3-AS1Q8N2X6 119 aa3.79□□□□□ -1.8
PTPN13-201ENST00000316707 PRR25Q96S07 402 aa3.79□□□□□ -1.8
PTPN13-201ENST00000316707 TMEM133Q9H2Q1 129 aa3.79□□□□□ -1.8
PTPN13-201ENST00000316707 FAM201AQ5SY85 155 aa3.78□□□□□ -1.8
PTPN13-201ENST00000316707 LINC01546A6NGU7 62 aa3.78□□□□□ -1.8
PTPN13-201ENST00000316707 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.78□□□□□ -1.8
PTPN13-201ENST00000316707 CKS1BP61024 79 aa3.78□□□□□ -1.8
PTPN13-201ENST00000316707 MSMPQ1L6U9 139 aa3.78□□□□□ -1.8
PTPN13-201ENST00000316707 UTF1Q5T230 341 aa3.78□□□□□ -1.8
PTPN13-201ENST00000316707 FOXC2Q99958 501 aa3.78□□□□□ -1.8
PTPN13-201ENST00000316707 TRAV12-1A0A0B4J245 112 aa3.78□□□□□ -1.8
PTPN13-201ENST00000316707 C17orf100A8MU93 164 aa3.78□□□□□ -1.8
PTPN13-201ENST00000316707 WFDC8Q8IUA0 241 aa3.78□□□□□ -1.8
PTPN13-201ENST00000316707 CEND1Q8N111 149 aa3.78□□□□□ -1.8
PTPN13-201ENST00000316707 PCDH15Q96QU1 1955 aa3.78□□□□□ -1.8
PTPN13-201ENST00000316707 CGB1A6NKQ9 187 aa3.78□□□□□ -1.8
PTPN13-201ENST00000316707 IL4P05112 153 aa3.78□□□□□ -1.8
PTPN13-201ENST00000316707 LEPP41159 167 aa3.78□□□□□ -1.8
PTPN13-201ENST00000316707 KLRD1Q13241 179 aa3.78□□□□□ -1.8
PTPN13-201ENST00000316707 HIST1H4GQ99525 98 aa3.78□□□□□ -1.8
PTPN13-201ENST00000316707 LOC389332A0A1B0GUA5 103 aa3.78□□□□□ -1.8
PTPN13-201ENST00000316707 ZNF815PA8K554 130 aa3.78□□□□□ -1.8
PTPN13-201ENST00000316707 PPP1R17O96001 155 aa3.78□□□□□ -1.8
PTPN13-201ENST00000316707 IGHV3-48P01763 117 aa3.78□□□□□ -1.8
PTPN13-201ENST00000316707 CCL3L1P16619 93 aa3.78□□□□□ -1.8
PTPN13-201ENST00000316707 WT1P19544 449 aaPredicted RBP3.78□□□□□ -1.8
PTPN13-201ENST00000316707 MFAP4P55083 255 aa3.78□□□□□ -1.8
PTPN13-201ENST00000316707 PHLDA1Q8WV24 401 aaPredicted RBP3.78□□□□□ -1.8
PTPN13-201ENST00000316707 HHLA3Q9XRX5 114 aa3.78□□□□□ -1.8
PTPN13-201ENST00000316707 CACNA1GO43497 2377 aa3.78□□□□□ -1.8
PTPN13-201ENST00000316707 I3L2K1 104 aa3.78□□□□□ -1.81
PTPN13-201ENST00000316707 NKX2-8O15522 239 aa3.78□□□□□ -1.81
PTPN13-201ENST00000316707 TNFRSF6BO95407 300 aa3.78□□□□□ -1.81
PTPN13-201ENST00000316707 CD24P25063 80 aa3.78□□□□□ -1.81
PTPN13-201ENST00000316707 PAX8Q06710 450 aa3.78□□□□□ -1.81
PTPN13-201ENST00000316707 C12orf74Q32Q52 190 aa3.78□□□□□ -1.81
PTPN13-201ENST00000316707 ORMDL2Q53FV1 153 aa3.78□□□□□ -1.81
PTPN13-201ENST00000316707 ZNF491Q8N8L2 437 aa3.78□□□□□ -1.81
PTPN13-201ENST00000316707 TMEM213A2RRL7 107 aa3.77□□□□□ -1.81
PTPN13-201ENST00000316707 E7EUB6 86 aa3.77□□□□□ -1.81
PTPN13-201ENST00000316707 M0R3E3 92 aa3.77□□□□□ -1.81
PTPN13-201ENST00000316707 OVOL3O00110 214 aa3.77□□□□□ -1.81
PTPN13-201ENST00000316707 SH2D1AO60880 128 aa3.77□□□□□ -1.81
PTPN13-201ENST00000316707 IGHV1-8P0DP01 117 aa3.77□□□□□ -1.81
PTPN13-201ENST00000316707 HES3Q5TGS1 186 aa3.77□□□□□ -1.81
PTPN13-201ENST00000316707 TMEM200BQ69YZ2 307 aa3.77□□□□□ -1.81
PTPN13-201ENST00000316707 IGFL2Q6UWQ7 119 aa3.77□□□□□ -1.81
PTPN13-201ENST00000316707 TMEM158Q8WZ71 300 aa3.77□□□□□ -1.81
PTPN13-201ENST00000316707 DKK2Q9UBU2 259 aa3.77□□□□□ -1.81
PTPN13-201ENST00000316707 ZDBF2Q9HCK1 2354 aa3.77□□□□□ -1.81
PTPN13-201ENST00000316707 H3BMG7 143 aa3.77□□□□□ -1.81
PTPN13-201ENST00000316707 CNIH1O95406 144 aa3.77□□□□□ -1.81
PTPN13-201ENST00000316707 MAFAQ8NHW3 353 aaPredicted RBP3.77□□□□□ -1.81
PTPN13-201ENST00000316707 DLX4Q92988 240 aaPredicted RBP3.77□□□□□ -1.81
PTPN13-201ENST00000316707 CHD3Q12873 2000 aaKnown RBP3.77□□□□□ -1.81
PTPN13-201ENST00000316707 CEP350Q5VT06 3117 aa3.77□□□□□ -1.81
PTPN13-201ENST00000316707 TRBV20-1A0A075B6N2 111 aa3.77□□□□□ -1.81
PTPN13-201ENST00000316707 LOXL1Q08397 574 aaPredicted RBP3.77□□□□□ -1.81
PTPN13-201ENST00000316707 ZNF418Q8TF45 676 aaPredicted RBP3.77□□□□□ -1.81
PTPN13-201ENST00000316707 PPDPFLQ8WWR9 84 aa3.77□□□□□ -1.81
PTPN13-201ENST00000316707 IGFBPL1Q8WX77 278 aa3.77□□□□□ -1.81
PTPN13-201ENST00000316707 EXPH5Q8NEV8 1989 aa3.77□□□□□ -1.81
PTPN13-201ENST00000316707 TMSB15BA0A087X1C1 80 aa3.77□□□□□ -1.81
PTPN13-201ENST00000316707 PRSS47A8MTI9 375 aa3.77□□□□□ -1.81
PTPN13-201ENST00000316707 APOMO95445 188 aa3.77□□□□□ -1.81
PTPN13-201ENST00000316707 TM4SF20Q53R12 229 aa3.77□□□□□ -1.81
PTPN13-201ENST00000316707 SPAG8Q99932 426 aaPredicted RBP3.77□□□□□ -1.81
PTPN13-201ENST00000316707 SLC50A1Q9BRV3 221 aa3.77□□□□□ -1.81
PTPN13-201ENST00000316707 TNCP24821 2201 aa3.77□□□□□ -1.81
PTPN13-201ENST00000316707 CRYGBP07316 175 aa3.77□□□□□ -1.81
PTPN13-201ENST00000316707 SLC25A16P16260 332 aa3.77□□□□□ -1.81
PTPN13-201ENST00000316707 CCL8P80075 99 aa3.77□□□□□ -1.81
PTPN13-201ENST00000316707 OR11H6Q8NGC7 330 aa3.77□□□□□ -1.81
PTPN13-201ENST00000316707 ABCA1O95477 2261 aa3.77□□□□□ -1.81
PTPN13-201ENST00000316707 ORM1P02763 201 aa3.76□□□□□ -1.81
PTPN13-201ENST00000316707 ASPHD1Q5U4P2 390 aa3.76□□□□□ -1.81
PTPN13-201ENST00000316707 PIP4P2Q8N4L2 257 aa3.76□□□□□ -1.81
PTPN13-201ENST00000316707 NPIPB5A8MRT5 1133 aa3.76□□□□□ -1.81
PTPN13-201ENST00000316707 LOXP28300 417 aaPredicted RBP3.76□□□□□ -1.81
PTPN13-201ENST00000316707 TMEM105Q8N8V8 129 aa3.76□□□□□ -1.81
PTPN13-201ENST00000316707 HIF1ANQ9NWT6 349 aa3.76□□□□□ -1.81
PTPN13-201ENST00000316707 A0A087WX48 190 aa3.76□□□□□ -1.81
PTPN13-201ENST00000316707 F8VRH5 84 aa3.76□□□□□ -1.81
PTPN13-201ENST00000316707 H7C1H1 209 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms