RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 SORL1Q92673 2214 aa9.94□□□□□ -0.82
PCF11-201ENST00000298281 TINCRA0A1B0GVN0 87 aa9.94□□□□□ -0.82
PCF11-201ENST00000298281 BUB3O43684 328 aa9.94□□□□□ -0.82
PCF11-201ENST00000298281 IGFBP3P17936 291 aaPredicted RBP9.94□□□□□ -0.82
PCF11-201ENST00000298281 HSD52Q0P140 79 aa9.94□□□□□ -0.82
PCF11-201ENST00000298281 MAJINQ3KP22 176 aa9.94□□□□□ -0.82
PCF11-201ENST00000298281 TMEM170AQ8WVE7 144 aa9.94□□□□□ -0.82
PCF11-201ENST00000298281 CACNA1HO95180 2353 aa9.94□□□□□ -0.82
PCF11-201ENST00000298281 IGLV3-32A0A0A0MS00 114 aa9.93□□□□□ -0.82
PCF11-201ENST00000298281 H3BUX3 64 aa9.93□□□□□ -0.82
PCF11-201ENST00000298281 FRMPD3Q5JV73 1810 aa9.93□□□□□ -0.82
PCF11-201ENST00000298281 KLRD1Q13241 179 aa9.93□□□□□ -0.82
PCF11-201ENST00000298281 ZCCHC24Q8N2G6 241 aaKnown RBP9.93□□□□□ -0.82
PCF11-201ENST00000298281 C9orf106Q8NAJ2 232 aa9.93□□□□□ -0.82
PCF11-201ENST00000298281 A0A1B0GTI1 187 aa9.93□□□□□ -0.82
PCF11-201ENST00000298281 AZU1P20160 251 aa9.93□□□□□ -0.82
PCF11-201ENST00000298281 TCF15Q12870 199 aa9.93□□□□□ -0.82
PCF11-201ENST00000298281 BRD3OSQ6XYD6 125 aa9.93□□□□□ -0.82
PCF11-201ENST00000298281 XCL2Q9UBD3 114 aa9.93□□□□□ -0.82
PCF11-201ENST00000298281 COL5A3P25940 1745 aaPredicted RBP9.93□□□□□ -0.82
PCF11-201ENST00000298281 IL18BPO95998 194 aa9.93□□□□□ -0.82
PCF11-201ENST00000298281 Q5BKY6 102 aa9.93□□□□□ -0.82
PCF11-201ENST00000298281 C18orf12Q96KH6 178 aa9.93□□□□□ -0.82
PCF11-201ENST00000298281 BCL6BQ8N143 479 aaPredicted RBP9.92□□□□□ -0.82
PCF11-201ENST00000298281 TIMM23O14925 209 aa9.92□□□□□ -0.82
PCF11-201ENST00000298281 PMS2P5A8MQ11 134 aa9.92□□□□□ -0.82
PCF11-201ENST00000298281 D6R8Y8 96 aa9.92□□□□□ -0.82
PCF11-201ENST00000298281 RLFQ13129 1914 aa9.92□□□□□ -0.82
PCF11-201ENST00000298281 ADAMTS7Q9UKP4 1686 aa9.92□□□□□ -0.82
PCF11-201ENST00000298281 EPOPA6NHQ4 379 aa9.92□□□□□ -0.82
PCF11-201ENST00000298281 C14orf178Q8N769 122 aaPredicted RBP9.92□□□□□ -0.82
PCF11-201ENST00000298281 CFHR2P36980 270 aa9.92□□□□□ -0.82
PCF11-201ENST00000298281 RNF5Q99942 180 aa9.92□□□□□ -0.82
PCF11-201ENST00000298281 PYYP10082 97 aa9.91□□□□□ -0.82
PCF11-201ENST00000298281 MORN5Q5VZ52 161 aa9.91□□□□□ -0.82
PCF11-201ENST00000298281 C17orf77Q96MU5 243 aa9.91□□□□□ -0.82
PCF11-201ENST00000298281 EXOC3-AS1Q8N2X6 119 aa9.91□□□□□ -0.82
PCF11-201ENST00000298281 RS1O15537 224 aa9.91□□□□□ -0.82
PCF11-201ENST00000298281 MINOS1Q5TGZ0 78 aa9.91□□□□□ -0.82
PCF11-201ENST00000298281 LINC01356Q8N9X3 169 aa9.91□□□□□ -0.82
PCF11-201ENST00000298281 MINOS1-NBL1R4GNA1 71 aa9.91□□□□□ -0.82
PCF11-201ENST00000298281 CREBBPQ92793 2442 aa9.91□□□□□ -0.82
PCF11-201ENST00000298281 MALRD1Q5VYJ5 2156 aa9.91□□□□□ -0.82
PCF11-201ENST00000298281 BMPERQ8N8U9 685 aa9.91□□□□□ -0.82
PCF11-201ENST00000298281 MLNRO43193 412 aa9.91□□□□□ -0.82
PCF11-201ENST00000298281 IGHG2P01859 326 aa9.91□□□□□ -0.82
PCF11-201ENST00000298281 CSRP3P50461 194 aa9.91□□□□□ -0.82
PCF11-201ENST00000298281 RNF183Q96D59 192 aa9.91□□□□□ -0.82
PCF11-201ENST00000298281 ARID2Q68CP9 1835 aa9.91□□□□□ -0.82
PCF11-201ENST00000298281 UBE2AP49459 152 aa9.91□□□□□ -0.82
PCF11-201ENST00000298281 NBASA2RRP1 2371 aa9.91□□□□□ -0.82
PCF11-201ENST00000298281 C20orf204Q6ZNR8 217 aa9.9□□□□□ -0.82
PCF11-201ENST00000298281 GAGE12BA1L429 117 aa9.9□□□□□ -0.82
PCF11-201ENST00000298281 GAGE7O76087 117 aa9.9□□□□□ -0.82
PCF11-201ENST00000298281 GAGE12FP0CL80 117 aa9.9□□□□□ -0.82
PCF11-201ENST00000298281 GAGE12GP0CL81 117 aa9.9□□□□□ -0.82
PCF11-201ENST00000298281 GAGE12IP0CL82 117 aa9.9□□□□□ -0.82
PCF11-201ENST00000298281 MBNL3Q9NUK0 354 aaKnown RBP9.9□□□□□ -0.82
PCF11-201ENST00000298281 IGKV1D-43A0A0B4J1Z2 117 aa9.9□□□□□ -0.82
PCF11-201ENST00000298281 MPZP25189 248 aa9.9□□□□□ -0.82
PCF11-201ENST00000298281 ZNF138P52744 262 aa9.9□□□□□ -0.82
PCF11-201ENST00000298281 TSKUQ8WUA8 353 aa9.9□□□□□ -0.82
PCF11-201ENST00000298281 RALGAPA2Q2PPJ7 1873 aa9.9□□□□□ -0.82
PCF11-201ENST00000298281 TIRAPP58753 221 aa9.9□□□□□ -0.82
PCF11-201ENST00000298281 SLC25A48Q6ZT89 311 aaKnown RBP9.9□□□□□ -0.82
PCF11-201ENST00000298281 LY6G5BQ8NDX9 201 aa9.9□□□□□ -0.82
PCF11-201ENST00000298281 LINC00477Q96M19 166 aa9.9□□□□□ -0.82
PCF11-201ENST00000298281 VSIRQ9H7M9 311 aa9.9□□□□□ -0.82
PCF11-201ENST00000298281 ETDCA0A1B0GVM5 59 aa9.9□□□□□ -0.83
PCF11-201ENST00000298281 B4DSR2 109 aa9.9□□□□□ -0.83
PCF11-201ENST00000298281 PROP1O75360 226 aa9.9□□□□□ -0.83
PCF11-201ENST00000298281 IGKV1-5P01602 117 aa9.9□□□□□ -0.83
PCF11-201ENST00000298281 PLPPR1Q8TBJ4 325 aa9.9□□□□□ -0.83
PCF11-201ENST00000298281 NABP1Q96AH0 204 aa9.9□□□□□ -0.83
PCF11-201ENST00000298281 SPATA25Q9BR10 227 aa9.9□□□□□ -0.83
PCF11-201ENST00000298281 CELA3BP08861 270 aa9.89□□□□□ -0.83
PCF11-201ENST00000298281 SYNJ2BPP57105 145 aa9.89□□□□□ -0.83
PCF11-201ENST00000298281 RHODO00212 210 aa9.89□□□□□ -0.83
PCF11-201ENST00000298281 CRYGCP07315 174 aa9.89□□□□□ -0.83
PCF11-201ENST00000298281 TIMP3P35625 211 aa9.89□□□□□ -0.83
PCF11-201ENST00000298281 IGKV4-1P06312 121 aa9.89□□□□□ -0.83
PCF11-201ENST00000298281 DEFB131AP59861 70 aa9.89□□□□□ -0.83
PCF11-201ENST00000298281 CFHR1Q03591 330 aa9.89□□□□□ -0.83
PCF11-201ENST00000298281 PSG3Q16557 428 aa9.89□□□□□ -0.83
PCF11-201ENST00000298281 RNF222A6NCQ9 220 aa9.89□□□□□ -0.83
PCF11-201ENST00000298281 EFNB3Q15768 340 aa9.89□□□□□ -0.83
PCF11-201ENST00000298281 ATP6V0BQ99437 205 aa9.89□□□□□ -0.83
PCF11-201ENST00000298281 TMEM243Q9BU79 118 aa9.89□□□□□ -0.83
PCF11-201ENST00000298281 A0A1W2PRS3 328 aa9.89□□□□□ -0.83
PCF11-201ENST00000298281 SHISA9B4DS77 424 aa9.89□□□□□ -0.83
PCF11-201ENST00000298281 EFNA2O43921 213 aa9.89□□□□□ -0.83
PCF11-201ENST00000298281 DKK1O94907 266 aa9.89□□□□□ -0.83
PCF11-201ENST00000298281 NDUFC2O95298 119 aa9.89□□□□□ -0.83
PCF11-201ENST00000298281 RNASE2P10153 161 aaKnown RBP9.89□□□□□ -0.83
PCF11-201ENST00000298281 A0A087X0K7 114 aa9.88□□□□□ -0.83
PCF11-201ENST00000298281 A0A0G2JMM0 328 aa9.88□□□□□ -0.83
PCF11-201ENST00000298281 A0A1W2PPB8 328 aa9.88□□□□□ -0.83
PCF11-201ENST00000298281 KIR3DP1A8MWS1 328 aa9.88□□□□□ -0.83
PCF11-201ENST00000298281 FUSP35637 526 aaKnown RBP eCLIP9.88□□□□□ -0.837e-10■■□□□ 12
PCF11-201ENST00000298281 GNLYP22749 145 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms