RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 FXYD7P58549 80 aa19.22■□□□□ 0.67
SPTSSA-201ENST00000298130 BPIFA4PQ86YQ2 179 aa19.22■□□□□ 0.67
SPTSSA-201ENST00000298130 PSG8Q9UQ74 426 aa19.22■□□□□ 0.67
SPTSSA-201ENST00000298130 NPIPB6E9PJ23 425 aa19.22■□□□□ 0.67
SPTSSA-201ENST00000298130 HLA-DRB1P01911 266 aa19.22■□□□□ 0.67
SPTSSA-201ENST00000298130 FOXC1Q12948 553 aa19.22■□□□□ 0.67
SPTSSA-201ENST00000298130 SIGLEC15Q6ZMC9 328 aa19.22■□□□□ 0.67
SPTSSA-201ENST00000298130 SHANK2-AS3Q9BTD1 123 aa19.22■□□□□ 0.67
SPTSSA-201ENST00000298130 FAM106CPP0CH98 169 aa19.21■□□□□ 0.67
SPTSSA-201ENST00000298130 FAM106AQ4KMX7 169 aa19.21■□□□□ 0.67
SPTSSA-201ENST00000298130 RNF125Q96EQ8 232 aa19.21■□□□□ 0.67
SPTSSA-201ENST00000298130 SCNM1Q9BWG6 230 aa19.21■□□□□ 0.67
SPTSSA-201ENST00000298130 CCL25O15444 150 aa19.21■□□□□ 0.67
SPTSSA-201ENST00000298130 SNAI2O43623 268 aa19.21■□□□□ 0.67
SPTSSA-201ENST00000298130 LOC389332A0A1B0GUA5 103 aa19.2■□□□□ 0.66
SPTSSA-201ENST00000298130 LY6LH3BQJ8 138 aa19.2■□□□□ 0.66
SPTSSA-201ENST00000298130 MPV17L2Q567V2 206 aa19.2■□□□□ 0.66
SPTSSA-201ENST00000298130 TMEM14CQ9P0S9 112 aa19.2■□□□□ 0.66
SPTSSA-201ENST00000298130 SERTM2A0A1B0GWG4 89 aa19.2■□□□□ 0.66
SPTSSA-201ENST00000298130 GFRA4Q9GZZ7 299 aa19.2■□□□□ 0.66
SPTSSA-201ENST00000298130 A0A1B0GUT8 65 aa19.19■□□□□ 0.66
SPTSSA-201ENST00000298130 MRPS16Q9Y3D3 137 aaKnown RBP19.19■□□□□ 0.66
SPTSSA-201ENST00000298130 H3BRN7 92 aa19.19■□□□□ 0.66
SPTSSA-201ENST00000298130 FOXE3Q13461 319 aa19.19■□□□□ 0.66
SPTSSA-201ENST00000298130 GNG7O60262 68 aa19.18■□□□□ 0.66
SPTSSA-201ENST00000298130 HAX1O00165 279 aa19.18■□□□□ 0.66
SPTSSA-201ENST00000298130 NBR2O15453 112 aa19.18■□□□□ 0.66
SPTSSA-201ENST00000298130 PTTG1IPP53801 180 aa19.18■□□□□ 0.66
SPTSSA-201ENST00000298130 CHCHD1Q96BP2 118 aaKnown RBP19.18■□□□□ 0.66
SPTSSA-201ENST00000298130 ZNF414Q96IQ9 312 aa19.18■□□□□ 0.66
SPTSSA-201ENST00000298130 NCBP2LA6PVI3 153 aaKnown RBP19.17■□□□□ 0.66
SPTSSA-201ENST00000298130 NDFIP1Q9BT67 221 aa19.17■□□□□ 0.66
SPTSSA-201ENST00000298130 SOX21Q9Y651 276 aaPredicted RBP19.17■□□□□ 0.66
SPTSSA-201ENST00000298130 C20orf202A1L168 122 aa19.17■□□□□ 0.66
SPTSSA-201ENST00000298130 TMEM213A2RRL7 107 aa19.17■□□□□ 0.66
SPTSSA-201ENST00000298130 LOXL1Q08397 574 aaPredicted RBP19.17■□□□□ 0.66
SPTSSA-201ENST00000298130 IGKV2-40A0A087WW87 121 aaPredicted RBP19.16■□□□□ 0.66
SPTSSA-201ENST00000298130 IGKV2D-40P01614 121 aaPredicted RBP19.16■□□□□ 0.66
SPTSSA-201ENST00000298130 NDPQ00604 133 aa19.16■□□□□ 0.66
SPTSSA-201ENST00000298130 PSG3Q16557 428 aa19.16■□□□□ 0.66
SPTSSA-201ENST00000298130 NCR2O95944 276 aa19.16■□□□□ 0.66
SPTSSA-201ENST00000298130 LIPFP07098 398 aa19.16■□□□□ 0.66
SPTSSA-201ENST00000298130 NEU4Q8WWR8 484 aaPredicted RBP19.16■□□□□ 0.66
SPTSSA-201ENST00000298130 HOXB4P17483 251 aaPredicted RBP19.15■□□□□ 0.66
SPTSSA-201ENST00000298130 DYNAPQ8N1N2 210 aa19.15■□□□□ 0.66
SPTSSA-201ENST00000298130 Q8TAT8 98 aa19.15■□□□□ 0.66
SPTSSA-201ENST00000298130 DPM3Q9P2X0 92 aa19.15■□□□□ 0.66
SPTSSA-201ENST00000298130 NUDT3O95989 172 aa19.15■□□□□ 0.66
SPTSSA-201ENST00000298130 HLA-DMBP28068 263 aa19.15■□□□□ 0.66
SPTSSA-201ENST00000298130 MAP1LC3CQ9BXW4 147 aa19.15■□□□□ 0.66
SPTSSA-201ENST00000298130 MRPS12O15235 138 aaKnown RBP19.14■□□□□ 0.65
SPTSSA-201ENST00000298130 CRXO43186 299 aaPredicted RBP19.14■□□□□ 0.65
SPTSSA-201ENST00000298130 CFHR4Q92496 578 aa19.14■□□□□ 0.65
SPTSSA-201ENST00000298130 FANCD2OSQ96PS1 177 aa19.14■□□□□ 0.65
SPTSSA-201ENST00000298130 OR2T8A6NH00 312 aa19.13■□□□□ 0.65
SPTSSA-201ENST00000298130 IFI27P40305 119 aaPredicted RBP19.13■□□□□ 0.65
SPTSSA-201ENST00000298130 PRSS3P2Q8NHM4 247 aa19.13■□□□□ 0.65
SPTSSA-201ENST00000298130 COX11Q9Y6N1 276 aa19.13■□□□□ 0.65
SPTSSA-201ENST00000298130 TMEM75Q8N9X5 138 aa19.13■□□□□ 0.65
SPTSSA-201ENST00000298130 C1RLQ9NZP8 487 aa19.13■□□□□ 0.65
SPTSSA-201ENST00000298130 C21orf62-AS1Q17RA5 79 aa19.12■□□□□ 0.65
SPTSSA-201ENST00000298130 C16orf54Q6UWD8 224 aa19.12■□□□□ 0.65
SPTSSA-201ENST00000298130 LYZL1Q6UWQ5 148 aa19.12■□□□□ 0.65
SPTSSA-201ENST00000298130 AMN1Q8IY45 258 aa19.12■□□□□ 0.65
SPTSSA-201ENST00000298130 OR5AL1P0C617 328 aa19.12■□□□□ 0.65
SPTSSA-201ENST00000298130 PAX2Q02962 417 aa19.12■□□□□ 0.65
SPTSSA-201ENST00000298130 RIGQ13278 110 aa19.12■□□□□ 0.65
SPTSSA-201ENST00000298130 VKORC1Q9BQB6 163 aa19.12■□□□□ 0.65
SPTSSA-201ENST00000298130 AP5S1Q9NUS5 200 aa19.12■□□□□ 0.65
SPTSSA-201ENST00000298130 A0A087X0K7 114 aa19.11■□□□□ 0.65
SPTSSA-201ENST00000298130 FAM231BA6NCW3 169 aa19.11■□□□□ 0.65
SPTSSA-201ENST00000298130 K7EQM0 130 aa19.11■□□□□ 0.65
SPTSSA-201ENST00000298130 FAM162BQ5T6X4 162 aa19.11■□□□□ 0.65
SPTSSA-201ENST00000298130 TMEM191AQ9H0A3 160 aa19.11■□□□□ 0.65
SPTSSA-201ENST00000298130 SMKR1H3BMG3 65 aa19.11■□□□□ 0.65
SPTSSA-201ENST00000298130 D6R8Y8 96 aa19.1■□□□□ 0.65
SPTSSA-201ENST00000298130 CCL21O00585 134 aa19.1■□□□□ 0.65
SPTSSA-201ENST00000298130 OR8A1Q8NGG7 326 aa19.1■□□□□ 0.65
SPTSSA-201ENST00000298130 F8W735 103 aaPredicted RBP19.1■□□□□ 0.65
SPTSSA-201ENST00000298130 CT45A10P0DMU9 189 aa19.1■□□□□ 0.65
SPTSSA-201ENST00000298130 C5orf64Q2M2E5 130 aa19.1■□□□□ 0.65
SPTSSA-201ENST00000298130 ZNF738Q8NE65 137 aa19.1■□□□□ 0.65
SPTSSA-201ENST00000298130 HSBP1L1C9JCN9 74 aa19.09■□□□□ 0.65
SPTSSA-201ENST00000298130 SLC25A34Q6PIV7 304 aa19.09■□□□□ 0.65
SPTSSA-201ENST00000298130 FA2HQ7L5A8 372 aa19.09■□□□□ 0.65
SPTSSA-201ENST00000298130 ORAOV1Q8WV07 137 aa19.09■□□□□ 0.65
SPTSSA-201ENST00000298130 WFDC3Q8IUB2 231 aa19.09■□□□□ 0.65
SPTSSA-201ENST00000298130 AAMDCQ9H7C9 122 aa19.09■□□□□ 0.65
SPTSSA-201ENST00000298130 ST20Q9HBF5 79 aa19.09■□□□□ 0.65
SPTSSA-201ENST00000298130 WI2-2373I1.2A0A1W2PRP0 233 aa19.08■□□□□ 0.65
SPTSSA-201ENST00000298130 SH2D1AO60880 128 aa19.08■□□□□ 0.65
SPTSSA-201ENST00000298130 CBY3A6NI87 242 aa19.08■□□□□ 0.64
SPTSSA-201ENST00000298130 SPTAN1Q13813 2472 aaKnown RBP19.07■□□□□ 0.64
SPTSSA-201ENST00000298130 IGHV3OR16-13A0A075B7E8 117 aa19.07■□□□□ 0.64
SPTSSA-201ENST00000298130 IGHV3-74A0A0B4J1X5 117 aa19.07■□□□□ 0.64
SPTSSA-201ENST00000298130 NPIPB5A8MRT5 1133 aa19.07■□□□□ 0.64
SPTSSA-201ENST00000298130 LY6G5BQ8NDX9 201 aa19.07■□□□□ 0.64
SPTSSA-201ENST00000298130 IGHV3-66A0A0C4DH42 116 aa19.07■□□□□ 0.64
SPTSSA-201ENST00000298130 RNASE8Q8TDE3 154 aaKnown RBP19.07■□□□□ 0.64
SPTSSA-201ENST00000298130 ARPC1AQ92747 370 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms