RNA–Protein interactions for RNA: ENSMUST00000173369.1

Trim39-205, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

TSL 1 (best) BASIC

Gene Trim39, Length 2,914 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-205ENSMUST00000173369 Ssna1Q9JJ94 119 aa6.86□□□□□ -1.31
Trim39-205ENSMUST00000173369 Cldn15Q9Z0S5 227 aa6.86□□□□□ -1.31
Trim39-205ENSMUST00000173369 Olfr122W4VSP0 330 aa6.86□□□□□ -1.31
Trim39-205ENSMUST00000173369 Ighv1-81A0A075B5Y4 117 aa6.86□□□□□ -1.31
Trim39-205ENSMUST00000173369 Rpl7a-ps5A0A140T8L3 268 aa6.86□□□□□ -1.31
Trim39-205ENSMUST00000173369 Rhox3gB9EJQ9 160 aa6.86□□□□□ -1.31
Trim39-205ENSMUST00000173369 Gm11027G8JL69 66 aa6.86□□□□□ -1.31
Trim39-205ENSMUST00000173369 Bcl2P10417 236 aa6.86□□□□□ -1.31
Trim39-205ENSMUST00000173369 Olfr143P34985 313 aa6.86□□□□□ -1.31
Trim39-205ENSMUST00000173369 Hsf1P38532 525 aa6.86□□□□□ -1.31
Trim39-205ENSMUST00000173369 Pdlim4P70271 330 aa6.86□□□□□ -1.31
Trim39-205ENSMUST00000173369 Zfp7Q3TFZ4 685 aa6.86□□□□□ -1.31
Trim39-205ENSMUST00000173369 Tmem184aQ3UFJ6 425 aa6.86□□□□□ -1.31
Trim39-205ENSMUST00000173369 Taar8bQ5QD06 344 aa6.86□□□□□ -1.31
Trim39-205ENSMUST00000173369 Olfr1371Q7TQT7 311 aa6.86□□□□□ -1.31
Trim39-205ENSMUST00000173369 Olfr205Q7TS37 305 aa6.86□□□□□ -1.31
Trim39-205ENSMUST00000173369 Cacfd1Q8BG21 171 aa6.86□□□□□ -1.31
Trim39-205ENSMUST00000173369 LipkQ8BM14 398 aa6.86□□□□□ -1.31
Trim39-205ENSMUST00000173369 Lsm11Q8BUV6 361 aa6.86□□□□□ -1.31
Trim39-205ENSMUST00000173369 Olfr1102Q8VES2 324 aa6.86□□□□□ -1.31
Trim39-205ENSMUST00000173369 H1fooQ8VIK3 304 aa6.86□□□□□ -1.31
Trim39-205ENSMUST00000173369 Parm1Q923D3 296 aa6.86□□□□□ -1.31
Trim39-205ENSMUST00000173369 Smim8Q9CQQ0 97 aa6.86□□□□□ -1.31
Trim39-205ENSMUST00000173369 Vmn1r50Q9EP51 310 aa6.86□□□□□ -1.31
Trim39-205ENSMUST00000173369 Kcnip1Q9JJ57 227 aa6.86□□□□□ -1.31
Trim39-205ENSMUST00000173369 Fbp1Q9QXD6 338 aa6.86□□□□□ -1.31
Trim39-205ENSMUST00000173369 CompQ9R0G6 755 aa6.86□□□□□ -1.31
Trim39-205ENSMUST00000173369 Ighv4-1A0A075B5R5 116 aa6.85□□□□□ -1.31
Trim39-205ENSMUST00000173369 Fthl17bA2AHC5 176 aa6.85□□□□□ -1.31
Trim39-205ENSMUST00000173369 Olfr1255A2AUA4 310 aa6.85□□□□□ -1.31
Trim39-205ENSMUST00000173369 Gm15217A2CG07 155 aa6.85□□□□□ -1.31
Trim39-205ENSMUST00000173369 BC048679D3YXE9 172 aa6.85□□□□□ -1.31
Trim39-205ENSMUST00000173369 Gm9611L7N476 213 aa6.85□□□□□ -1.31
Trim39-205ENSMUST00000173369 Klf9O35739 244 aa6.85□□□□□ -1.31
Trim39-205ENSMUST00000173369 Ifna4P07351 186 aa6.85□□□□□ -1.31
Trim39-205ENSMUST00000173369 Rps20P60867 119 aaKnown RBP6.85□□□□□ -1.31
Trim39-205ENSMUST00000173369 Gpr55Q3UJF0 327 aa6.85□□□□□ -1.31
Trim39-205ENSMUST00000173369 Sf3a2Q62203 475 aaKnown RBP6.85□□□□□ -1.31
Trim39-205ENSMUST00000173369 Olfr314Q7TRZ7 330 aa6.85□□□□□ -1.31
Trim39-205ENSMUST00000173369 Olfr281Q8VET6 311 aa6.85□□□□□ -1.31
Trim39-205ENSMUST00000173369 Tomm40lQ9CZR3 308 aa6.85□□□□□ -1.31
Trim39-205ENSMUST00000173369 Slc25a22Q9D6M3 323 aa6.85□□□□□ -1.31
Trim39-205ENSMUST00000173369 Vmn1r48Q9EQ52 302 aa6.85□□□□□ -1.31
Trim39-205ENSMUST00000173369 Dscaml1Q4VA61 2053 aa6.85□□□□□ -1.31
Trim39-205ENSMUST00000173369 Ighv5-12A0A075B5Q4 117 aa6.85□□□□□ -1.31
Trim39-205ENSMUST00000173369 Gm45844A0A1B0GRQ2 137 aa6.85□□□□□ -1.31
Trim39-205ENSMUST00000173369 EhfO70273 300 aa6.85□□□□□ -1.31
Trim39-205ENSMUST00000173369 Slc25a17O70579 307 aa6.85□□□□□ -1.31
Trim39-205ENSMUST00000173369 Vwc2lQ505H4 222 aa6.85□□□□□ -1.31
Trim39-205ENSMUST00000173369 XkrxQ5GH68 449 aa6.85□□□□□ -1.31
Trim39-205ENSMUST00000173369 Arfrp1Q8BXL7 201 aa6.85□□□□□ -1.31
Trim39-205ENSMUST00000173369 Fam234aQ8C0Z1 555 aa6.85□□□□□ -1.31
Trim39-205ENSMUST00000173369 Raet1eQ9CZQ6 251 aa6.85□□□□□ -1.31
Trim39-205ENSMUST00000173369 PipoxQ9D826 390 aa6.85□□□□□ -1.31
Trim39-205ENSMUST00000173369 Q9D8N1 392 aa6.85□□□□□ -1.31
Trim39-205ENSMUST00000173369 Rhebl1Q9D8T3 184 aa6.85□□□□□ -1.31
Trim39-205ENSMUST00000173369 Olfr102B2RT33 308 aa6.84□□□□□ -1.31
Trim39-205ENSMUST00000173369 Gm3727J3QM54 205 aa6.84□□□□□ -1.31
Trim39-205ENSMUST00000173369 Olfr92L7N475 312 aa6.84□□□□□ -1.31
Trim39-205ENSMUST00000173369 Lyz1P17897 148 aa6.84□□□□□ -1.31
Trim39-205ENSMUST00000173369 Rpl29P47915 160 aaKnown RBP6.84□□□□□ -1.31
Trim39-205ENSMUST00000173369 Aqp2P56402 271 aa6.84□□□□□ -1.31
Trim39-205ENSMUST00000173369 Olfr139Q60891 315 aa6.84□□□□□ -1.31
Trim39-205ENSMUST00000173369 Nmnat2Q8BNJ3 307 aa6.84□□□□□ -1.31
Trim39-205ENSMUST00000173369 Cphx2Q8BX39 182 aa6.84□□□□□ -1.31
Trim39-205ENSMUST00000173369 Olfr1257Q8VGP0 309 aa6.84□□□□□ -1.31
Trim39-205ENSMUST00000173369 Vmn1r45Q8VIC7 318 aa6.84□□□□□ -1.31
Trim39-205ENSMUST00000173369 Pth2Q91W27 100 aa6.84□□□□□ -1.31
Trim39-205ENSMUST00000173369 Sft2d3Q9CSV6 209 aa6.84□□□□□ -1.31
Trim39-205ENSMUST00000173369 MrapQ9D159 127 aa6.84□□□□□ -1.31
Trim39-205ENSMUST00000173369 AY761184Q9D848 116 aa6.84□□□□□ -1.31
Trim39-205ENSMUST00000173369 Mfsd4b2Q9D8I5 366 aa6.84□□□□□ -1.31
Trim39-205ENSMUST00000173369 Tlnrd1Q9ERE8 362 aa6.84□□□□□ -1.31
Trim39-205ENSMUST00000173369 Anxa10Q9QZ10 324 aa6.84□□□□□ -1.31
Trim39-205ENSMUST00000173369 Gstz1Q9WVL0 216 aa6.84□□□□□ -1.31
Trim39-205ENSMUST00000173369 SncgQ9Z0F7 123 aaKnown RBP6.84□□□□□ -1.31
Trim39-205ENSMUST00000173369 Gm3550W4VSN7 160 aa6.84□□□□□ -1.31
Trim39-205ENSMUST00000173369 Tcrg-V6A0A075B5Y8 134 aa6.84□□□□□ -1.31
Trim39-205ENSMUST00000173369 Ighv9-2A0A0B4J1J4 117 aa6.84□□□□□ -1.31
Trim39-205ENSMUST00000173369 Gm20715E9Q3L7 95 aa6.84□□□□□ -1.31
Trim39-205ENSMUST00000173369 Ccdc71lE9Q4T4 218 aa6.84□□□□□ -1.31
Trim39-205ENSMUST00000173369 1700067P10RikG3X8U2 183 aa6.84□□□□□ -1.31
Trim39-205ENSMUST00000173369 Gm21788J3QNH3 180 aa6.84□□□□□ -1.31
Trim39-205ENSMUST00000173369 Gm21797J3QNW5 180 aa6.84□□□□□ -1.31
Trim39-205ENSMUST00000173369 Hoxb6P09023 224 aa6.84□□□□□ -1.31
Trim39-205ENSMUST00000173369 Pdcd6P12815 191 aaKnown RBP6.84□□□□□ -1.31
Trim39-205ENSMUST00000173369 GrprP21729 384 aa6.84□□□□□ -1.31
Trim39-205ENSMUST00000173369 Rab22aP35285 194 aa6.84□□□□□ -1.31
Trim39-205ENSMUST00000173369 Gpr12P35412 334 aa6.84□□□□□ -1.31
Trim39-205ENSMUST00000173369 Rab7aP51150 207 aaKnown RBP6.84□□□□□ -1.31
Trim39-205ENSMUST00000173369 Ccl12Q62401 104 aa6.84□□□□□ -1.31
Trim39-205ENSMUST00000173369 Olfr1241Q8VF91 314 aa6.84□□□□□ -1.31
Trim39-205ENSMUST00000173369 Olfr435Q8VFS3 313 aa6.84□□□□□ -1.31
Trim39-205ENSMUST00000173369 Scgb1b27Q91WB5 92 aa6.84□□□□□ -1.31
Trim39-205ENSMUST00000173369 Exosc4Q921I9 245 aaKnown RBP6.84□□□□□ -1.31
Trim39-205ENSMUST00000173369 Magt1Q9CQY5 335 aa6.84□□□□□ -1.31
Trim39-205ENSMUST00000173369 Coa3Q9D2R6 108 aa6.84□□□□□ -1.31
Trim39-205ENSMUST00000173369 Hspg2Q05793 3707 aaKnown RBP6.84□□□□□ -1.31
Trim39-205ENSMUST00000173369 Ighv1-31A0A0A6YWK5 117 aa6.83□□□□□ -1.32
Trim39-205ENSMUST00000173369 Gm15114B1B0X6 433 aa6.83□□□□□ -1.32
Retrieved 100 of 22,080 RNA–protein pairs in 65.1 ms