RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 KLK10O43240 276 aa15.97■□□□□ 0.15
SYNGAP1-227ENST00000638142 EXOC3-AS1Q8N2X6 119 aa15.97■□□□□ 0.15
SYNGAP1-227ENST00000638142 SRSF8Q9BRL6 282 aaKnown RBP15.97■□□□□ 0.15
SYNGAP1-227ENST00000638142 RNF24Q9Y225 148 aa15.97■□□□□ 0.15
SYNGAP1-227ENST00000638142 CDKN1BP46527 198 aa15.96■□□□□ 0.15
SYNGAP1-227ENST00000638142 FBXL15Q9H469 300 aa15.96■□□□□ 0.15
SYNGAP1-227ENST00000638142 TRAV30A0A087WSZ9 112 aa15.96■□□□□ 0.15
SYNGAP1-227ENST00000638142 RNF5Q99942 180 aa15.96■□□□□ 0.15
SYNGAP1-227ENST00000638142 SCNM1Q9BWG6 230 aa15.96■□□□□ 0.15
SYNGAP1-227ENST00000638142 TMEM191AQ9H0A3 160 aa15.96■□□□□ 0.15
SYNGAP1-227ENST00000638142 ANKRD39Q53RE8 183 aa15.95■□□□□ 0.14
SYNGAP1-227ENST00000638142 LINC00173Q6ZV60 143 aa15.95■□□□□ 0.14
SYNGAP1-227ENST00000638142 TMEM75Q8N9X5 138 aa15.95■□□□□ 0.14
SYNGAP1-227ENST00000638142 OR4C5Q8NGB2 326 aa15.95■□□□□ 0.14
SYNGAP1-227ENST00000638142 SH3BGRL2Q9UJC5 107 aa15.95■□□□□ 0.14
SYNGAP1-227ENST00000638142 CEP250Q9BV73 2442 aa15.95■□□□□ 0.14
SYNGAP1-227ENST00000638142 MALRD1Q5VYJ5 2156 aa15.95■□□□□ 0.14
SYNGAP1-227ENST00000638142 IGKV1-17P01599 117 aa15.95■□□□□ 0.14
SYNGAP1-227ENST00000638142 RBP4P02753 201 aa15.95■□□□□ 0.14
SYNGAP1-227ENST00000638142 DLX1P56177 255 aa15.95■□□□□ 0.14
SYNGAP1-227ENST00000638142 MPV17L2Q567V2 206 aa15.95■□□□□ 0.14
SYNGAP1-227ENST00000638142 RPEQ96AT9 228 aa15.95■□□□□ 0.14
SYNGAP1-227ENST00000638142 BPIFA4PQ86YQ2 179 aa15.94■□□□□ 0.14
SYNGAP1-227ENST00000638142 SHANK2-AS3Q9BTD1 123 aa15.94■□□□□ 0.14
SYNGAP1-227ENST00000638142 PKDREJQ9NTG1 2253 aa15.94■□□□□ 0.14
SYNGAP1-227ENST00000638142 TRBV19A0A075B6N1 114 aa15.94■□□□□ 0.14
SYNGAP1-227ENST00000638142 A0A1B0GUT8 65 aa15.94■□□□□ 0.14
SYNGAP1-227ENST00000638142 OVOL3O00110 214 aa15.94■□□□□ 0.14
SYNGAP1-227ENST00000638142 RHOGP84095 191 aa15.94■□□□□ 0.14
SYNGAP1-227ENST00000638142 SLC25A34Q6PIV7 304 aa15.94■□□□□ 0.14
SYNGAP1-227ENST00000638142 PET117Q6UWS5 81 aa15.94■□□□□ 0.14
SYNGAP1-227ENST00000638142 GFRALQ6UXV0 394 aa15.94■□□□□ 0.14
SYNGAP1-227ENST00000638142 MAP1LC3CQ9BXW4 147 aa15.94■□□□□ 0.14
SYNGAP1-227ENST00000638142 SMG1Q96Q15 3661 aaKnown RBP15.94■□□□□ 0.14
SYNGAP1-227ENST00000638142 HTR1DP28221 377 aa15.93■□□□□ 0.14
SYNGAP1-227ENST00000638142 APOBEC3AP31941 199 aaPredicted RBP15.93■□□□□ 0.14
SYNGAP1-227ENST00000638142 LYPD1Q8N2G4 141 aa15.93■□□□□ 0.14
SYNGAP1-227ENST00000638142 HSPB8Q9UJY1 196 aa15.93■□□□□ 0.14
SYNGAP1-227ENST00000638142 B9A039 149 aa15.93■□□□□ 0.14
SYNGAP1-227ENST00000638142 K7EQM0 130 aa15.93■□□□□ 0.14
SYNGAP1-227ENST00000638142 RPS20P60866 119 aaKnown RBP15.93■□□□□ 0.14
SYNGAP1-227ENST00000638142 RIGQ13278 110 aa15.93■□□□□ 0.14
SYNGAP1-227ENST00000638142 PLGLAQ15195 96 aa15.93■□□□□ 0.14
SYNGAP1-227ENST00000638142 VAMP3Q15836 100 aa15.93■□□□□ 0.14
SYNGAP1-227ENST00000638142 GATD1Q8NB37 220 aa15.93■□□□□ 0.14
SYNGAP1-227ENST00000638142 hDV102S1A0JD36 115 aa15.92■□□□□ 0.14
SYNGAP1-227ENST00000638142 HSBP1L1C9JCN9 74 aa15.92■□□□□ 0.14
SYNGAP1-227ENST00000638142 H3BRN7 92 aa15.92■□□□□ 0.14
SYNGAP1-227ENST00000638142 TOX4O94842 621 aa15.92■□□□□ 0.14
SYNGAP1-227ENST00000638142 BVES-AS1Q5T3Y7 98 aa15.92■□□□□ 0.14
SYNGAP1-227ENST00000638142 ZC2HC1AQ96GY0 325 aa15.92■□□□□ 0.14
SYNGAP1-227ENST00000638142 A0A1B0GW15 77 aa15.92■□□□□ 0.14
SYNGAP1-227ENST00000638142 ZNF785A8K8V0 405 aa15.92■□□□□ 0.14
SYNGAP1-227ENST00000638142 PRB3Q04118 309 aaPredicted RBP15.92■□□□□ 0.14
SYNGAP1-227ENST00000638142 SAPCD1Q5SSQ6 148 aa15.92■□□□□ 0.14
SYNGAP1-227ENST00000638142 ZGRF1Q86YA3 2104 aa15.92■□□□□ 0.14
SYNGAP1-227ENST00000638142 TAX1BP3O14907 124 aa15.91■□□□□ 0.14
SYNGAP1-227ENST00000638142 HLA-DRB1P01911 266 aa15.91■□□□□ 0.14
SYNGAP1-227ENST00000638142 COX7A1P24310 79 aa15.91■□□□□ 0.14
SYNGAP1-227ENST00000638142 TP73-AS1Q9UF72 201 aa15.91■□□□□ 0.14
SYNGAP1-227ENST00000638142 K7EIM0 57 aa15.91■□□□□ 0.14
SYNGAP1-227ENST00000638142 NUDT3O95989 172 aa15.91■□□□□ 0.14
SYNGAP1-227ENST00000638142 C12orf54Q6X4T0 127 aa15.91■□□□□ 0.14
SYNGAP1-227ENST00000638142 SIGLEC15Q6ZMC9 328 aa15.91■□□□□ 0.14
SYNGAP1-227ENST00000638142 DEFB125Q8N687 156 aa15.91■□□□□ 0.14
SYNGAP1-227ENST00000638142 ABHD17AQ96GS6 310 aa15.91■□□□□ 0.14
SYNGAP1-227ENST00000638142 SCRT2Q9NQ03 307 aa15.91■□□□□ 0.14
SYNGAP1-227ENST00000638142 PPIAL4CA0A0B4J2A2 164 aa15.9■□□□□ 0.14
SYNGAP1-227ENST00000638142 LY6LH3BQJ8 138 aa15.9■□□□□ 0.14
SYNGAP1-227ENST00000638142 PPIAL4GP0DN37 164 aa15.9■□□□□ 0.14
SYNGAP1-227ENST00000638142 Q6AWC8 147 aa15.9■□□□□ 0.14
SYNGAP1-227ENST00000638142 Q71RC1 249 aaPredicted RBP15.9■□□□□ 0.14
SYNGAP1-227ENST00000638142 MS4A6AQ9H2W1 248 aa15.9■□□□□ 0.14
SYNGAP1-227ENST00000638142 PSG8Q9UQ74 426 aa15.9■□□□□ 0.14
SYNGAP1-227ENST00000638142 CNIH1O95406 144 aa15.9■□□□□ 0.14
SYNGAP1-227ENST00000638142 ARMS2P0C7Q2 107 aa15.9■□□□□ 0.14
SYNGAP1-227ENST00000638142 TMUB1Q9BVT8 246 aa15.9■□□□□ 0.14
SYNGAP1-227ENST00000638142 ZNF138P52744 262 aa15.89■□□□□ 0.13
SYNGAP1-227ENST00000638142 PSG3Q16557 428 aa15.89■□□□□ 0.13
SYNGAP1-227ENST00000638142 Q8NA96 180 aa15.89■□□□□ 0.13
SYNGAP1-227ENST00000638142 NEU4Q8WWR8 484 aaPredicted RBP15.89■□□□□ 0.13
SYNGAP1-227ENST00000638142 MAP1BP46821 2468 aaKnown RBP15.89■□□□□ 0.13
SYNGAP1-227ENST00000638142 C17orf77Q96MU5 243 aa15.89■□□□□ 0.13
SYNGAP1-227ENST00000638142 MGAQ8IWI9 3026 aa15.88■□□□□ 0.13
SYNGAP1-227ENST00000638142 ZNF491Q8N8L2 437 aa15.88■□□□□ 0.13
SYNGAP1-227ENST00000638142 RNF125Q96EQ8 232 aa15.88■□□□□ 0.13
SYNGAP1-227ENST00000638142 AP5S1Q9NUS5 200 aa15.88■□□□□ 0.13
SYNGAP1-227ENST00000638142 CD3EP07766 207 aa15.88■□□□□ 0.13
SYNGAP1-227ENST00000638142 ABCA1O95477 2261 aa15.87■□□□□ 0.13
SYNGAP1-227ENST00000638142 LINC01545Q5VT33 79 aa15.87■□□□□ 0.13
SYNGAP1-227ENST00000638142 MRPS12O15235 138 aaKnown RBP15.87■□□□□ 0.13
SYNGAP1-227ENST00000638142 CSN3P07498 182 aa15.87■□□□□ 0.13
SYNGAP1-227ENST00000638142 S100A7AQ86SG5 101 aa15.87■□□□□ 0.13
SYNGAP1-227ENST00000638142 DMXL1Q9Y485 3027 aa15.87■□□□□ 0.13
SYNGAP1-227ENST00000638142 MUC21A0A0G2JKD1 596 aa15.86■□□□□ 0.13
SYNGAP1-227ENST00000638142 MUC21A0A140T8X8 626 aa15.86■□□□□ 0.13
SYNGAP1-227ENST00000638142 LYNX1G3V0Z9 82 aa15.86■□□□□ 0.13
SYNGAP1-227ENST00000638142 TIMM23O14925 209 aa15.86■□□□□ 0.13
SYNGAP1-227ENST00000638142 LYNX1P0DP58 116 aa15.86■□□□□ 0.13
SYNGAP1-227ENST00000638142 MUC21Q5SSG8 566 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms