RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 PRSS47A8MTI9 375 aa10.88□□□□□ -0.67
PRPF40B-209ENST00000548825 SNAI2O43623 268 aa10.88□□□□□ -0.67
PRPF40B-209ENST00000548825 HINT1P49773 126 aaPredicted RBP10.88□□□□□ -0.67
PRPF40B-209ENST00000548825 TPTE2P1Q5T6R2 138 aa10.88□□□□□ -0.67
PRPF40B-209ENST00000548825 TSKUQ8WUA8 353 aa10.88□□□□□ -0.67
PRPF40B-209ENST00000548825 KCNS1Q96KK3 526 aa10.88□□□□□ -0.67
PRPF40B-209ENST00000548825 GPR82Q96P67 336 aa10.88□□□□□ -0.67
PRPF40B-209ENST00000548825 C19orf24Q9BVV8 132 aa10.88□□□□□ -0.67
PRPF40B-209ENST00000548825 SLC25A39Q9BZJ4 359 aaPredicted RBP10.88□□□□□ -0.67
PRPF40B-209ENST00000548825 RNF2Q99496 336 aa10.88□□□□□ -0.67
PRPF40B-209ENST00000548825 IGKV3-7A0A075B6H7 116 aa10.87□□□□□ -0.67
PRPF40B-209ENST00000548825 C18orf32Q8TCD1 76 aa10.87□□□□□ -0.67
PRPF40B-209ENST00000548825 VWC2LB2RUY7 222 aa10.87□□□□□ -0.67
PRPF40B-209ENST00000548825 LIPFP07098 398 aa10.87□□□□□ -0.67
PRPF40B-209ENST00000548825 DMRTA1Q5VZB9 504 aa10.87□□□□□ -0.67
PRPF40B-209ENST00000548825 SSX8Q7RTT4 187 aa10.87□□□□□ -0.67
PRPF40B-209ENST00000548825 ZNF596Q8TC21 504 aa10.87□□□□□ -0.67
PRPF40B-209ENST00000548825 MT-ND6P03923 174 aa10.87□□□□□ -0.67
PRPF40B-209ENST00000548825 TCRAP04437 139 aa10.87□□□□□ -0.67
PRPF40B-209ENST00000548825 LURAP1LQ8IV03 231 aa10.87□□□□□ -0.67
PRPF40B-209ENST00000548825 OR4F17Q8NGA8 305 aa10.87□□□□□ -0.67
PRPF40B-209ENST00000548825 Q8TAT8 98 aa10.87□□□□□ -0.67
PRPF40B-209ENST00000548825 F11RQ9Y624 299 aaKnown RBP10.87□□□□□ -0.67
PRPF40B-209ENST00000548825 PSMB11A5LHX3 300 aa10.86□□□□□ -0.67
PRPF40B-209ENST00000548825 RAB1BQ9H0U4 201 aa10.86□□□□□ -0.67
PRPF40B-209ENST00000548825 NCOR1P1Q9H4R4 102 aa10.86□□□□□ -0.67
PRPF40B-209ENST00000548825 HNRNPA3P51991 378 aaKnown RBP10.86□□□□□ -0.67
PRPF40B-209ENST00000548825 LINC00173Q6ZV60 143 aa10.86□□□□□ -0.67
PRPF40B-209ENST00000548825 WFDC3Q8IUB2 231 aa10.86□□□□□ -0.67
PRPF40B-209ENST00000548825 VKORC1Q9BQB6 163 aa10.86□□□□□ -0.67
PRPF40B-209ENST00000548825 LOC105371242A0A075B767 164 aa10.86□□□□□ -0.67
PRPF40B-209ENST00000548825 K7ENP7 123 aa10.86□□□□□ -0.67
PRPF40B-209ENST00000548825 RAB4AP20338 218 aa10.86□□□□□ -0.67
PRPF40B-209ENST00000548825 DLX6P56179 175 aa10.86□□□□□ -0.67
PRPF40B-209ENST00000548825 C5orf17Q8NAS9 161 aa10.86□□□□□ -0.67
PRPF40B-209ENST00000548825 GRAMD2BQ96HH9 432 aa10.86□□□□□ -0.67
PRPF40B-209ENST00000548825 RPP21Q9H633 154 aaKnown RBP10.86□□□□□ -0.67
PRPF40B-209ENST00000548825 LINC00574Q9H8X3 128 aa10.86□□□□□ -0.67
PRPF40B-209ENST00000548825 DPM3Q9P2X0 92 aa10.86□□□□□ -0.67
PRPF40B-209ENST00000548825 C3orf36Q3SXR2 165 aa10.85□□□□□ -0.67
PRPF40B-209ENST00000548825 TEX45Q8NA69 505 aa10.85□□□□□ -0.67
PRPF40B-209ENST00000548825 WNK1Q9H4A3 2382 aa10.85□□□□□ -0.67
PRPF40B-209ENST00000548825 SMIM27A0A1W2PRY6 76 aa10.85□□□□□ -0.67
PRPF40B-209ENST00000548825 A8MWL6 223 aa10.85□□□□□ -0.67
PRPF40B-209ENST00000548825 PPIFP30405 207 aaKnown RBP10.85□□□□□ -0.67
PRPF40B-209ENST00000548825 C8orf46Q8TAG6 207 aa10.85□□□□□ -0.67
PRPF40B-209ENST00000548825 IGLC1P0CG04 106 aa10.84□□□□□ -0.67
PRPF40B-209ENST00000548825 NIT1Q86X76 327 aa10.84□□□□□ -0.67
PRPF40B-209ENST00000548825 IGKV2-40A0A087WW87 121 aaPredicted RBP10.84□□□□□ -0.67
PRPF40B-209ENST00000548825 FNDC10F2Z333 226 aa10.84□□□□□ -0.67
PRPF40B-209ENST00000548825 IGKV2D-40P01614 121 aaPredicted RBP10.84□□□□□ -0.67
PRPF40B-209ENST00000548825 IGLV1-47P01700 117 aa10.84□□□□□ -0.67
PRPF40B-209ENST00000548825 HLA-DMBP28068 263 aa10.84□□□□□ -0.67
PRPF40B-209ENST00000548825 HBBP68871 147 aa10.84□□□□□ -0.67
PRPF40B-209ENST00000548825 TMEM30BQ3MIR4 351 aa10.84□□□□□ -0.67
PRPF40B-209ENST00000548825 STXBP6Q8NFX7 210 aa10.84□□□□□ -0.67
PRPF40B-209ENST00000548825 GTSF1Q8WW33 167 aa10.84□□□□□ -0.67
PRPF40B-209ENST00000548825 TEX22C9J3V5 150 aa10.84□□□□□ -0.67
PRPF40B-209ENST00000548825 IGKV1-17P01599 117 aa10.84□□□□□ -0.67
PRPF40B-209ENST00000548825 IGF2-ASQ6U949 168 aa10.84□□□□□ -0.67
PRPF40B-209ENST00000548825 BPIFA4PQ86YQ2 179 aa10.84□□□□□ -0.67
PRPF40B-209ENST00000548825 OR4A5Q8NH83 315 aa10.84□□□□□ -0.67
PRPF40B-209ENST00000548825 NBR2O15453 112 aa10.83□□□□□ -0.68
PRPF40B-209ENST00000548825 RNF125Q96EQ8 232 aa10.83□□□□□ -0.68
PRPF40B-209ENST00000548825 C8orf49Q96NF6 230 aa10.83□□□□□ -0.68
PRPF40B-209ENST00000548825 CT45A10P0DMU9 189 aa10.83□□□□□ -0.68
PRPF40B-209ENST00000548825 NUTF2P61970 127 aaKnown RBP10.83□□□□□ -0.68
PRPF40B-209ENST00000548825 MRGPRG-AS1Q2M3A8 158 aa10.83□□□□□ -0.68
PRPF40B-209ENST00000548825 LY96Q9Y6Y9 160 aa10.83□□□□□ -0.68
PRPF40B-209ENST00000548825 MIEN1Q9BRT3 115 aa10.83□□□□□ -0.68
PRPF40B-209ENST00000548825 CELSR2Q9HCU4 2923 aa10.82□□□□□ -0.68
PRPF40B-209ENST00000548825 TRBV9A0A0B4J1U6 114 aa10.82□□□□□ -0.68
PRPF40B-209ENST00000548825 ARMS2P0C7Q2 107 aa10.82□□□□□ -0.68
PRPF40B-209ENST00000548825 ATP5IP56385 69 aaPredicted RBP10.82□□□□□ -0.68
PRPF40B-209ENST00000548825 TMEM219Q86XT9 240 aa10.82□□□□□ -0.68
PRPF40B-209ENST00000548825 TRGV9Q99603 122 aa10.82□□□□□ -0.68
PRPF40B-209ENST00000548825 hDV102S1A0JD36 115 aa10.82□□□□□ -0.68
PRPF40B-209ENST00000548825 HLA-DRB1P01911 266 aa10.82□□□□□ -0.68
PRPF40B-209ENST00000548825 GP9P14770 177 aa10.82□□□□□ -0.68
PRPF40B-209ENST00000548825 GPR183P32249 361 aa10.82□□□□□ -0.68
PRPF40B-209ENST00000548825 Q0VG73 95 aa10.82□□□□□ -0.68
PRPF40B-209ENST00000548825 DYNAPQ8N1N2 210 aa10.82□□□□□ -0.68
PRPF40B-209ENST00000548825 TMEM75Q8N9X5 138 aa10.82□□□□□ -0.68
PRPF40B-209ENST00000548825 TMEM116Q8NCL8 245 aa10.82□□□□□ -0.68
PRPF40B-209ENST00000548825 VPS13CQ709C8 3753 aa10.81□□□□□ -0.68
PRPF40B-209ENST00000548825 LINC00311Q8N616 119 aa10.81□□□□□ -0.68
PRPF40B-209ENST00000548825 THAP8Q8NA92 274 aa10.81□□□□□ -0.68
PRPF40B-209ENST00000548825 C2orf88Q9BSF0 95 aa10.81□□□□□ -0.68
PRPF40B-209ENST00000548825 KAAG1Q9UBP8 84 aa10.81□□□□□ -0.68
PRPF40B-209ENST00000548825 NOTCH2Q04721 2471 aa10.81□□□□□ -0.68
PRPF40B-209ENST00000548825 ZFHX3Q15911 3703 aa10.81□□□□□ -0.68
PRPF40B-209ENST00000548825 NDPQ00604 133 aa10.81□□□□□ -0.68
PRPF40B-209ENST00000548825 EBLN2Q6P2I7 272 aa10.81□□□□□ -0.68
PRPF40B-209ENST00000548825 ZANQ9Y493 2812 aa10.81□□□□□ -0.68
PRPF40B-209ENST00000548825 C2CD3Q4AC94 2353 aa10.81□□□□□ -0.68
PRPF40B-209ENST00000548825 NPIPB5A8MRT5 1133 aa10.81□□□□□ -0.68
PRPF40B-209ENST00000548825 RPLP1P05386 114 aaKnown RBP10.81□□□□□ -0.68
PRPF40B-209ENST00000548825 VMO1Q7Z5L0 202 aa10.81□□□□□ -0.68
PRPF40B-209ENST00000548825 OR8A1Q8NGG7 326 aa10.81□□□□□ -0.68
PRPF40B-209ENST00000548825 PRSS3P2Q8NHM4 247 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms