RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 CCDC190Q86UF4 302 aa12.71□□□□□ -0.37
PCF11-206ENST00000533018 OR4D5Q8NGN0 318 aa12.71□□□□□ -0.37
PCF11-206ENST00000533018 GPR82Q96P67 336 aa12.71□□□□□ -0.37
PCF11-206ENST00000533018 PSENENQ9NZ42 101 aa12.71□□□□□ -0.37
PCF11-206ENST00000533018 YTHDF2Q9Y5A9 579 aaKnown RBP12.71□□□□□ -0.37
PCF11-206ENST00000533018 FAT2Q9NYQ8 4349 aa12.7□□□□□ -0.38
PCF11-206ENST00000533018 C9orf170A2RU37 121 aa12.7□□□□□ -0.38
PCF11-206ENST00000533018 RAP2BP61225 183 aa12.7□□□□□ -0.38
PCF11-206ENST00000533018 IGFL4Q6B9Z1 124 aa12.7□□□□□ -0.38
PCF11-206ENST00000533018 TMEM144Q7Z5S9 345 aa12.7□□□□□ -0.38
PCF11-206ENST00000533018 DNAH17Q9UFH2 4485 aa12.7□□□□□ -0.38
PCF11-206ENST00000533018 LINC00854A0A1B0GVQ3 168 aa12.69□□□□□ -0.38
PCF11-206ENST00000533018 SSSCA1O60232 199 aa12.69□□□□□ -0.38
PCF11-206ENST00000533018 ID3Q02535 119 aa12.69□□□□□ -0.38
PCF11-206ENST00000533018 TRIQKQ629K1 86 aa12.69□□□□□ -0.38
PCF11-206ENST00000533018 CYP2G1PQ6ZSU1 146 aa12.69□□□□□ -0.38
PCF11-206ENST00000533018 RNF182Q8N6D2 247 aa12.69□□□□□ -0.38
PCF11-206ENST00000533018 SLC25A39Q9BZJ4 359 aaPredicted RBP12.69□□□□□ -0.38
PCF11-206ENST00000533018 FLVCR2Q9UPI3 526 aa12.69□□□□□ -0.38
PCF11-206ENST00000533018 M0R2Z0 102 aa12.68□□□□□ -0.38
PCF11-206ENST00000533018 HYPMO75409 117 aa12.68□□□□□ -0.38
PCF11-206ENST00000533018 DUSP14O95147 198 aaKnown RBP12.68□□□□□ -0.38
PCF11-206ENST00000533018 SCGB1D2O95969 90 aa12.68□□□□□ -0.38
PCF11-206ENST00000533018 OR5G3P0C626 314 aa12.68□□□□□ -0.38
PCF11-206ENST00000533018 CNN1P51911 297 aaKnown RBP12.68□□□□□ -0.38
PCF11-206ENST00000533018 DAD1P61803 113 aa12.68□□□□□ -0.38
PCF11-206ENST00000533018 RRAS2P62070 204 aaPredicted RBP12.68□□□□□ -0.38
PCF11-206ENST00000533018 SPINK13Q1W4C9 94 aa12.68□□□□□ -0.38
PCF11-206ENST00000533018 ZNF738Q8NE65 137 aa12.68□□□□□ -0.38
PCF11-206ENST00000533018 FAM210BQ96KR6 192 aa12.68□□□□□ -0.38
PCF11-206ENST00000533018 IGF2BP2-AS1Q96M15 143 aa12.68□□□□□ -0.38
PCF11-206ENST00000533018 C17orf77Q96MU5 243 aa12.68□□□□□ -0.38
PCF11-206ENST00000533018 SRRQ9GZT4 340 aa12.68□□□□□ -0.38
PCF11-206ENST00000533018 HIGD1AQ9Y241 93 aa12.68□□□□□ -0.38
PCF11-206ENST00000533018 IGLV2-18A0A075B6J9 118 aa12.67□□□□□ -0.38
PCF11-206ENST00000533018 NAP1L6A6NFF2 107 aa12.67□□□□□ -0.38
PCF11-206ENST00000533018 NDUFB6O95139 128 aa12.67□□□□□ -0.38
PCF11-206ENST00000533018 INSP01308 110 aa12.67□□□□□ -0.38
PCF11-206ENST00000533018 OR4E1P0C645 316 aa12.67□□□□□ -0.38
PCF11-206ENST00000533018 C4orf46Q504U0 113 aa12.67□□□□□ -0.38
PCF11-206ENST00000533018 LRRC20Q8TCA0 184 aa12.67□□□□□ -0.38
PCF11-206ENST00000533018 PPP1R14DQ9NXH3 145 aa12.67□□□□□ -0.38
PCF11-206ENST00000533018 ZNF705GA8MUZ8 300 aaPredicted RBP12.66□□□□□ -0.38
PCF11-206ENST00000533018 H3BRN7 92 aa12.66□□□□□ -0.38
PCF11-206ENST00000533018 LINC00869P0C866 280 aa12.66□□□□□ -0.38
PCF11-206ENST00000533018 RPL7P18124 248 aaKnown RBP12.66□□□□□ -0.38
PCF11-206ENST00000533018 OXA1LQ15070 435 aa12.66□□□□□ -0.38
PCF11-206ENST00000533018 BAK1Q16611 211 aa12.66□□□□□ -0.38
PCF11-206ENST00000533018 AMTNQ6UX39 209 aa12.66□□□□□ -0.38
PCF11-206ENST00000533018 OR11H7Q8NGC8 314 aa12.66□□□□□ -0.38
PCF11-206ENST00000533018 UHRF2Q96PU4 802 aa12.66□□□□□ -0.38
PCF11-206ENST00000533018 SHANK2-AS3Q9BTD1 123 aa12.66□□□□□ -0.38
PCF11-206ENST00000533018 KRTAP17-1Q9BYP8 105 aa12.66□□□□□ -0.38
PCF11-206ENST00000533018 PCLOQ9Y6V0 5065 aa12.65□□□□□ -0.38
PCF11-206ENST00000533018 TRAV8-2A0A0B4J237 113 aa12.65□□□□□ -0.38
PCF11-206ENST00000533018 PRSS29PA6NIE9 313 aa12.65□□□□□ -0.38
PCF11-206ENST00000533018 CENPXA8MT69 81 aa12.65□□□□□ -0.38
PCF11-206ENST00000533018 PRM2P04554 102 aa12.65□□□□□ -0.38
PCF11-206ENST00000533018 METTL15P1P0C7V9 234 aa12.65□□□□□ -0.38
PCF11-206ENST00000533018 SELENOTP62341 195 aa12.65□□□□□ -0.38
PCF11-206ENST00000533018 RHOBP62745 196 aa12.65□□□□□ -0.38
PCF11-206ENST00000533018 S100A7AQ86SG5 101 aa12.65□□□□□ -0.38
PCF11-206ENST00000533018 OR10P1Q8NGE3 313 aa12.65□□□□□ -0.38
PCF11-206ENST00000533018 SMIM8Q96KF7 97 aa12.65□□□□□ -0.38
PCF11-206ENST00000533018 GSKIPQ9P0R6 139 aa12.65□□□□□ -0.38
PCF11-206ENST00000533018 MGAT4CQ9UBM8 478 aa12.65□□□□□ -0.38
PCF11-206ENST00000533018 PKHD1P08F94 4074 aa12.65□□□□□ -0.38
PCF11-206ENST00000533018 TRAV12-2A0A075B6T6 113 aa12.64□□□□□ -0.39
PCF11-206ENST00000533018 A8MTW9 85 aa12.64□□□□□ -0.39
PCF11-206ENST00000533018 CCNKO75909 580 aa12.64□□□□□ -0.39
PCF11-206ENST00000533018 ANXA7P20073 488 aaKnown RBP12.64□□□□□ -0.39
PCF11-206ENST00000533018 HIST1H1AQ02539 215 aaPredicted RBP12.64□□□□□ -0.39
PCF11-206ENST00000533018 IAH1Q2TAA2 248 aaPredicted RBP12.64□□□□□ -0.39
PCF11-206ENST00000533018 TMEM88Q6PEY1 159 aa12.64□□□□□ -0.39
PCF11-206ENST00000533018 BAP18Q8IXM2 172 aa12.64□□□□□ -0.39
PCF11-206ENST00000533018 ARL6Q9H0F7 186 aa12.64□□□□□ -0.39
PCF11-206ENST00000533018 NPVFQ9HCQ7 196 aa12.64□□□□□ -0.39
PCF11-206ENST00000533018 PMS2P5A8MQ11 134 aa12.63□□□□□ -0.39
PCF11-206ENST00000533018 DLK1P80370 383 aa12.63□□□□□ -0.39
PCF11-206ENST00000533018 LGALS9BQ3B8N2 356 aa12.63□□□□□ -0.39
PCF11-206ENST00000533018 TEPPQ6URK8 271 aa12.63□□□□□ -0.39
PCF11-206ENST00000533018 RTL8CO15255 209 aa12.62□□□□□ -0.39
PCF11-206ENST00000533018 CRXO43186 299 aaPredicted RBP12.62□□□□□ -0.39
PCF11-206ENST00000533018 DEFB130BP0DP73 79 aa12.62□□□□□ -0.39
PCF11-206ENST00000533018 DEFB130AP0DP74 79 aa12.62□□□□□ -0.39
PCF11-206ENST00000533018 PRB4P10163 310 aaPredicted RBP12.62□□□□□ -0.39
PCF11-206ENST00000533018 HTN1P15515 57 aa12.62□□□□□ -0.39
PCF11-206ENST00000533018 PLP1P60201 277 aa12.62□□□□□ -0.39
PCF11-206ENST00000533018 B2MP61769 119 aa12.62□□□□□ -0.39
PCF11-206ENST00000533018 SLC38A11Q08AI6 406 aa12.62□□□□□ -0.39
PCF11-206ENST00000533018 TMEM14EPQ6UXP3 125 aa12.62□□□□□ -0.39
PCF11-206ENST00000533018 LINC01587Q99440 93 aa12.62□□□□□ -0.39
PCF11-206ENST00000533018 RBM38Q9H0Z9 239 aaKnown RBP12.62□□□□□ -0.39
PCF11-206ENST00000533018 ARV1Q9H2C2 271 aa12.62□□□□□ -0.39
PCF11-206ENST00000533018 PKD1P98161 4303 aa12.61□□□□□ -0.39
PCF11-206ENST00000533018 LYRM9A8MSI8 78 aa12.61□□□□□ -0.39
PCF11-206ENST00000533018 BOLA2-SMG1P6H3BVE0 249 aa12.61□□□□□ -0.39
PCF11-206ENST00000533018 GOSR2O14653 212 aa12.61□□□□□ -0.39
PCF11-206ENST00000533018 CXCL3P19876 107 aa12.61□□□□□ -0.39
PCF11-206ENST00000533018 PSG3Q16557 428 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms