RNA–Protein interactions for RNA: ENST00000510877.5

LIN54-210, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 4,507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-210ENST00000510877 CLEC5AQ9NY25 188 aa10.01□□□□□ -0.81
LIN54-210ENST00000510877 TMEM262E9PQX1 116 aa10.01□□□□□ -0.81
LIN54-210ENST00000510877 CD5P06127 495 aa10.01□□□□□ -0.81
LIN54-210ENST00000510877 HSPE1P61604 102 aaKnown RBP10.01□□□□□ -0.81
LIN54-210ENST00000510877 C15orf32Q32M92 178 aa10.01□□□□□ -0.81
LIN54-210ENST00000510877 OR4P4Q8NGL7 312 aa10.01□□□□□ -0.81
LIN54-210ENST00000510877 NABP2Q9BQ15 211 aa10.01□□□□□ -0.81
LIN54-210ENST00000510877 OR2T8A6NH00 312 aa10.01□□□□□ -0.81
LIN54-210ENST00000510877 G3V318 75 aa10.01□□□□□ -0.81
LIN54-210ENST00000510877 ANOS1P23352 680 aa10.01□□□□□ -0.81
LIN54-210ENST00000510877 NMUP48645 174 aa10.01□□□□□ -0.81
LIN54-210ENST00000510877 C11orf53Q8IXP5 236 aa10.01□□□□□ -0.81
LIN54-210ENST00000510877 RBKSQ9H477 322 aa10.01□□□□□ -0.81
LIN54-210ENST00000510877 PRR13Q9NZ81 148 aa10.01□□□□□ -0.81
LIN54-210ENST00000510877 AMY1AP04745 511 aa10.01□□□□□ -0.81
LIN54-210ENST00000510877 CSN3P07498 182 aa10.01□□□□□ -0.81
LIN54-210ENST00000510877 RPS11P62280 158 aaKnown RBP eCLIP10.01□□□□□ -0.81
LIN54-210ENST00000510877 RCC1LQ96I51 464 aaKnown RBP10.01□□□□□ -0.81
LIN54-210ENST00000510877 C16orf92Q96LL3 132 aa10.01□□□□□ -0.81
LIN54-210ENST00000510877 TM2D1Q9BX74 207 aa10.01□□□□□ -0.81
LIN54-210ENST00000510877 IGHV3OR16-8A0A075B7F1 116 aa10□□□□□ -0.81
LIN54-210ENST00000510877 RAMP3O60896 148 aa10□□□□□ -0.81
LIN54-210ENST00000510877 AVPP01185 164 aa10□□□□□ -0.81
LIN54-210ENST00000510877 AMBPP02760 352 aa10□□□□□ -0.81
LIN54-210ENST00000510877 SAA1P0DJI8 122 aaPredicted RBP10□□□□□ -0.81
LIN54-210ENST00000510877 SEC11AP67812 179 aa10□□□□□ -0.81
LIN54-210ENST00000510877 SMAGPQ0VAQ4 97 aa10□□□□□ -0.81
LIN54-210ENST00000510877 DLX6P56179 175 aa10□□□□□ -0.81
LIN54-210ENST00000510877 OR1L4Q8NGR5 311 aa10□□□□□ -0.81
LIN54-210ENST00000510877 CD28P10747 220 aa10□□□□□ -0.81
LIN54-210ENST00000510877 ZNF562Q6V9R5 426 aa10□□□□□ -0.81
LIN54-210ENST00000510877 IMMP2LQ96T52 175 aa10□□□□□ -0.81
LIN54-210ENST00000510877 SORL1Q92673 2214 aa9.99□□□□□ -0.81
LIN54-210ENST00000510877 A0A1B0GWB2 263 aa9.99□□□□□ -0.81
LIN54-210ENST00000510877 P01737 135 aa9.99□□□□□ -0.81
LIN54-210ENST00000510877 SLC25A5P05141 298 aaKnown RBP9.99□□□□□ -0.81
LIN54-210ENST00000510877 OR8A1Q8NGG7 326 aa9.99□□□□□ -0.81
LIN54-210ENST00000510877 ZNF48Q96MX3 618 aaPredicted RBP9.99□□□□□ -0.81
LIN54-210ENST00000510877 A8MWL6 223 aa9.99□□□□□ -0.81
LIN54-210ENST00000510877 COX6CP09669 75 aa9.99□□□□□ -0.81
LIN54-210ENST00000510877 EMP1P54849 157 aa9.99□□□□□ -0.81
LIN54-210ENST00000510877 DEFB136Q30KP8 78 aa9.99□□□□□ -0.81
LIN54-210ENST00000510877 OR1B1Q8NGR6 318 aa9.99□□□□□ -0.81
LIN54-210ENST00000510877 OR2K2Q8NGT1 345 aa9.99□□□□□ -0.81
LIN54-210ENST00000510877 ZNF257Q9Y2Q1 563 aa9.99□□□□□ -0.81
LIN54-210ENST00000510877 TRAV14DV4A0A0A6YYC5 116 aa9.99□□□□□ -0.81
LIN54-210ENST00000510877 OR11H12B2RN74 326 aa9.99□□□□□ -0.81
LIN54-210ENST00000510877 MPDU1O75352 247 aa9.99□□□□□ -0.81
LIN54-210ENST00000510877 FSTL3O95633 263 aa9.99□□□□□ -0.81
LIN54-210ENST00000510877 SRIP30626 198 aa9.99□□□□□ -0.81
LIN54-210ENST00000510877 HOXD3P31249 432 aaPredicted RBP9.99□□□□□ -0.81
LIN54-210ENST00000510877 BTCP35070 178 aa9.99□□□□□ -0.81
LIN54-210ENST00000510877 ERVK11-1P61568 191 aa9.99□□□□□ -0.81
LIN54-210ENST00000510877 SDF2L1Q9HCN8 221 aa9.99□□□□□ -0.81
LIN54-210ENST00000510877 CYSLTR1Q9Y271 337 aa9.99□□□□□ -0.81
LIN54-210ENST00000510877 DYSFO75923 2080 aa9.99□□□□□ -0.81
LIN54-210ENST00000510877 NCOA6Q14686 2063 aaPredicted RBP9.99□□□□□ -0.81
LIN54-210ENST00000510877 CA1P00915 261 aaPredicted RBP9.99□□□□□ -0.81
LIN54-210ENST00000510877 Q8N7P7 452 aa9.99□□□□□ -0.81
LIN54-210ENST00000510877 OR10AG1Q8NH19 301 aa9.99□□□□□ -0.81
LIN54-210ENST00000510877 IL17DQ8TAD2 202 aa9.99□□□□□ -0.81
LIN54-210ENST00000510877 LOC107984156A0A0G2JMH3 177 aa9.98□□□□□ -0.81
LIN54-210ENST00000510877 IGKV3-20P01619 116 aa9.98□□□□□ -0.81
LIN54-210ENST00000510877 FOXE3Q13461 319 aa9.98□□□□□ -0.81
LIN54-210ENST00000510877 ARL17AQ8IVW1 177 aa9.98□□□□□ -0.81
LIN54-210ENST00000510877 FBLN5Q9UBX5 448 aa9.98□□□□□ -0.81
LIN54-210ENST00000510877 TRAV9-2A0A087WT02 112 aa9.98□□□□□ -0.81
LIN54-210ENST00000510877 NDUFB4O95168 129 aa9.98□□□□□ -0.81
LIN54-210ENST00000510877 RPL35AP18077 110 aaKnown RBP9.98□□□□□ -0.81
LIN54-210ENST00000510877 ASCL2Q99929 193 aa9.98□□□□□ -0.81
LIN54-210ENST00000510877 GRIFINA4D1Z8 144 aa9.98□□□□□ -0.81
LIN54-210ENST00000510877 MMP23AO75900 390 aa9.98□□□□□ -0.81
LIN54-210ENST00000510877 GP9P14770 177 aa9.98□□□□□ -0.81
LIN54-210ENST00000510877 RAB9AP51151 201 aa9.98□□□□□ -0.81
LIN54-210ENST00000510877 RND2P52198 227 aa9.98□□□□□ -0.81
LIN54-210ENST00000510877 RUNX1Q01196 453 aa9.98□□□□□ -0.81
LIN54-210ENST00000510877 IGFBPL1Q8WX77 278 aa9.98□□□□□ -0.81
LIN54-210ENST00000510877 COL6A5A8TX70 2615 aa9.98□□□□□ -0.81
LIN54-210ENST00000510877 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.97□□□□□ -0.81
LIN54-210ENST00000510877 PRSS8Q16651 343 aa9.97□□□□□ -0.81
LIN54-210ENST00000510877 ZNF664Q8N3J9 261 aa9.97□□□□□ -0.81
LIN54-210ENST00000510877 ARHGAP32A7KAX9 2087 aa9.97□□□□□ -0.81
LIN54-210ENST00000510877 NDUFA7O95182 113 aa9.97□□□□□ -0.81
LIN54-210ENST00000510877 IGHV3-48P01763 117 aa9.97□□□□□ -0.81
LIN54-210ENST00000510877 INSL3P51460 131 aa9.97□□□□□ -0.81
LIN54-210ENST00000510877 TMEM50BP56557 158 aa9.97□□□□□ -0.81
LIN54-210ENST00000510877 TAF15Q92804 592 aaKnown RBP eCLIP9.97□□□□□ -0.81
LIN54-210ENST00000510877 GPHA2Q96T91 129 aa9.97□□□□□ -0.81
LIN54-210ENST00000510877 ZNF747Q9BV97 191 aa9.97□□□□□ -0.81
LIN54-210ENST00000510877 UBE2L3P68036 154 aaKnown RBP9.97□□□□□ -0.81
LIN54-210ENST00000510877 FAM71F2Q6NXP2 309 aa9.97□□□□□ -0.81
LIN54-210ENST00000510877 FAM223BA6NKX1 122 aa9.96□□□□□ -0.81
LIN54-210ENST00000510877 PRB2P02812 416 aaPredicted RBP9.96□□□□□ -0.81
LIN54-210ENST00000510877 IL4P05112 153 aa9.96□□□□□ -0.81
LIN54-210ENST00000510877 ESDP10768 282 aa9.96□□□□□ -0.81
LIN54-210ENST00000510877 IGLL1P15814 213 aa9.96□□□□□ -0.81
LIN54-210ENST00000510877 FAM223AQ8IWN6 122 aa9.96□□□□□ -0.81
LIN54-210ENST00000510877 MYOZ3Q8TDC0 251 aa9.96□□□□□ -0.81
LIN54-210ENST00000510877 H0YJW9 148 aa9.96□□□□□ -0.82
LIN54-210ENST00000510877 EREGO14944 169 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms