RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 Q8N2B8 174 aa10.84□□□□□ -0.67
CLK3-204ENST00000483723 LYPD1Q8N2G4 141 aa10.84□□□□□ -0.67
CLK3-204ENST00000483723 HIST1H2BAQ96A08 127 aa10.84□□□□□ -0.67
CLK3-204ENST00000483723 ISOC2Q96AB3 205 aa10.84□□□□□ -0.67
CLK3-204ENST00000483723 ANAPC16Q96DE5 110 aa10.84□□□□□ -0.67
CLK3-204ENST00000483723 NPFFR1Q9GZQ6 430 aa10.84□□□□□ -0.67
CLK3-204ENST00000483723 OTORQ9NRC9 128 aa10.84□□□□□ -0.67
CLK3-204ENST00000483723 EPDR1Q9UM22 224 aa10.84□□□□□ -0.67
CLK3-204ENST00000483723 U3KQE9 123 aa10.84□□□□□ -0.67
CLK3-204ENST00000483723 MAP1AP78559 2803 aaPredicted RBP10.84□□□□□ -0.67
CLK3-204ENST00000483723 CLDN34H7C241 214 aa10.84□□□□□ -0.67
CLK3-204ENST00000483723 SNRPCP09234 159 aaKnown RBP10.84□□□□□ -0.67
CLK3-204ENST00000483723 CD99P14209 185 aa10.84□□□□□ -0.67
CLK3-204ENST00000483723 TMEM95Q3KNT9 176 aa10.84□□□□□ -0.67
CLK3-204ENST00000483723 LURAP1LQ8IV03 231 aa10.84□□□□□ -0.67
CLK3-204ENST00000483723 OR4F17Q8NGA8 305 aa10.84□□□□□ -0.67
CLK3-204ENST00000483723 Q9H3A6 140 aa10.84□□□□□ -0.67
CLK3-204ENST00000483723 TMA7Q9Y2S6 64 aaKnown RBP10.84□□□□□ -0.67
CLK3-204ENST00000483723 PEX7O00628 323 aa10.83□□□□□ -0.68
CLK3-204ENST00000483723 RPL7P18124 248 aaKnown RBP10.83□□□□□ -0.68
CLK3-204ENST00000483723 IL17RELQ6ZVW7 336 aa10.83□□□□□ -0.68
CLK3-204ENST00000483723 C5orf17Q8NAS9 161 aa10.83□□□□□ -0.68
CLK3-204ENST00000483723 IGF2BP2-AS1Q96M15 143 aa10.83□□□□□ -0.68
CLK3-204ENST00000483723 CDC42EP3Q9UKI2 254 aa10.83□□□□□ -0.68
CLK3-204ENST00000483723 KLF12Q9Y4X4 402 aa10.83□□□□□ -0.68
CLK3-204ENST00000483723 SVEP1Q4LDE5 3571 aa10.82□□□□□ -0.68
CLK3-204ENST00000483723 ZANQ9Y493 2812 aa10.82□□□□□ -0.68
CLK3-204ENST00000483723 IGHV3-35A0A0C4DH35 117 aa10.82□□□□□ -0.68
CLK3-204ENST00000483723 PGPEP1LA6NFU8 196 aa10.82□□□□□ -0.68
CLK3-204ENST00000483723 PPP5D1E7EU14 171 aa10.82□□□□□ -0.68
CLK3-204ENST00000483723 BUB3O43684 328 aa10.82□□□□□ -0.68
CLK3-204ENST00000483723 IGLV2-8P01709 118 aa10.82□□□□□ -0.68
CLK3-204ENST00000483723 SLC25A5P05141 298 aaKnown RBP10.82□□□□□ -0.68
CLK3-204ENST00000483723 ARL3P36405 182 aa10.82□□□□□ -0.68
CLK3-204ENST00000483723 PDE6HQ13956 83 aa10.82□□□□□ -0.68
CLK3-204ENST00000483723 ELOBQ15370 118 aa10.82□□□□□ -0.68
CLK3-204ENST00000483723 FAM24BQ8N5W8 94 aa10.82□□□□□ -0.68
CLK3-204ENST00000483723 C17orf77Q96MU5 243 aa10.82□□□□□ -0.68
CLK3-204ENST00000483723 GNB4Q9HAV0 340 aa10.82□□□□□ -0.68
CLK3-204ENST00000483723 CREBBPQ92793 2442 aa10.82□□□□□ -0.68
CLK3-204ENST00000483723 ITPR3Q14573 2671 aa10.82□□□□□ -0.68
CLK3-204ENST00000483723 H3BTX0 84 aa10.81□□□□□ -0.68
CLK3-204ENST00000483723 SRP14P37108 136 aaKnown RBP10.81□□□□□ -0.68
CLK3-204ENST00000483723 TMEM183BQ1AE95 376 aa10.81□□□□□ -0.68
CLK3-204ENST00000483723 CENPWQ5EE01 88 aa10.81□□□□□ -0.68
CLK3-204ENST00000483723 FAM209BQ5JX69 171 aa10.81□□□□□ -0.68
CLK3-204ENST00000483723 C1orf194Q5T5A4 169 aa10.81□□□□□ -0.68
CLK3-204ENST00000483723 SIGLEC15Q6ZMC9 328 aa10.81□□□□□ -0.68
CLK3-204ENST00000483723 OR4X2Q8NGF9 303 aa10.81□□□□□ -0.68
CLK3-204ENST00000483723 YAE1D1Q9NRH1 226 aa10.81□□□□□ -0.68
CLK3-204ENST00000483723 TMEM160Q9NX00 188 aa10.81□□□□□ -0.68
CLK3-204ENST00000483723 SMAD5-AS1Q9Y6J3 95 aa10.81□□□□□ -0.68
CLK3-204ENST00000483723 MYO9AB2RTY4 2548 aa10.81□□□□□ -0.68
CLK3-204ENST00000483723 K7EN84 100 aa10.81□□□□□ -0.68
CLK3-204ENST00000483723 NDUFA4O00483 81 aa10.81□□□□□ -0.68
CLK3-204ENST00000483723 TRBV12-3P01733 135 aa10.81□□□□□ -0.68
CLK3-204ENST00000483723 S100A9P06702 114 aaKnown RBP10.81□□□□□ -0.68
CLK3-204ENST00000483723 PFN1P07737 140 aaKnown RBP10.81□□□□□ -0.68
CLK3-204ENST00000483723 FOLR2P14207 255 aa10.81□□□□□ -0.68
CLK3-204ENST00000483723 GNG4P50150 75 aa10.81□□□□□ -0.68
CLK3-204ENST00000483723 CNN1P51911 297 aaKnown RBP10.81□□□□□ -0.68
CLK3-204ENST00000483723 MYOZ3Q8TDC0 251 aa10.81□□□□□ -0.68
CLK3-204ENST00000483723 ATG101Q9BSB4 218 aa10.81□□□□□ -0.68
CLK3-204ENST00000483723 AURKAIP1Q9NWT8 199 aaPredicted RBP10.81□□□□□ -0.68
CLK3-204ENST00000483723 CSMD1Q96PZ7 3565 aa10.81□□□□□ -0.68
CLK3-204ENST00000483723 PPP1R2P9O14990 202 aa10.8□□□□□ -0.68
CLK3-204ENST00000483723 ZNF253O75346 499 aa10.8□□□□□ -0.68
CLK3-204ENST00000483723 GCGP01275 180 aa10.8□□□□□ -0.68
CLK3-204ENST00000483723 TCRAP04437 139 aa10.8□□□□□ -0.68
CLK3-204ENST00000483723 ELANEP08246 267 aa10.8□□□□□ -0.68
CLK3-204ENST00000483723 GNG5P63218 68 aa10.8□□□□□ -0.68
CLK3-204ENST00000483723 TEX38Q6PEX7 206 aa10.8□□□□□ -0.68
CLK3-204ENST00000483723 OR8I2Q8N0Y5 310 aa10.8□□□□□ -0.68
CLK3-204ENST00000483723 ARL6IP6Q8N6S5 226 aa10.8□□□□□ -0.68
CLK3-204ENST00000483723 RNF152Q8N8N0 203 aa10.8□□□□□ -0.68
CLK3-204ENST00000483723 LINC00479Q96M42 142 aa10.8□□□□□ -0.68
CLK3-204ENST00000483723 GPR82Q96P67 336 aa10.8□□□□□ -0.68
CLK3-204ENST00000483723 IGHV3OR16-8A0A075B7F1 116 aa10.79□□□□□ -0.68
CLK3-204ENST00000483723 A0A087X0K7 114 aa10.79□□□□□ -0.68
CLK3-204ENST00000483723 H7BYZ3 331 aa10.79□□□□□ -0.68
CLK3-204ENST00000483723 IGHV3-11P01762 117 aa10.79□□□□□ -0.68
CLK3-204ENST00000483723 CRYBA1P05813 215 aa10.79□□□□□ -0.68
CLK3-204ENST00000483723 RPL15P61313 204 aaKnown RBP10.79□□□□□ -0.68
CLK3-204ENST00000483723 SLC35B1P78383 322 aa10.79□□□□□ -0.68
CLK3-204ENST00000483723 FOXE3Q13461 319 aa10.79□□□□□ -0.68
CLK3-204ENST00000483723 C10orf99Q6UWK7 81 aa10.79□□□□□ -0.68
CLK3-204ENST00000483723 LCNL1Q6ZST4 164 aa10.79□□□□□ -0.68
CLK3-204ENST00000483723 EXOC3-AS1Q8N2X6 119 aa10.79□□□□□ -0.68
CLK3-204ENST00000483723 SFRP2Q96HF1 295 aa10.79□□□□□ -0.68
CLK3-204ENST00000483723 METTL26Q96S19 204 aa10.79□□□□□ -0.68
CLK3-204ENST00000483723 PYGO2Q9BRQ0 406 aa10.79□□□□□ -0.68
CLK3-204ENST00000483723 TRBV6-1A0A0K0K1D8 114 aa10.78□□□□□ -0.68
CLK3-204ENST00000483723 SLC17A3O00476 420 aa10.78□□□□□ -0.68
CLK3-204ENST00000483723 RAB5AP20339 215 aa10.78□□□□□ -0.68
CLK3-204ENST00000483723 IMMP2LQ96T52 175 aa10.78□□□□□ -0.68
CLK3-204ENST00000483723 SERTAD4Q9NUC0 356 aa10.78□□□□□ -0.68
CLK3-204ENST00000483723 PEF1Q9UBV8 284 aaKnown RBP10.78□□□□□ -0.68
CLK3-204ENST00000483723 TRBV24-1A0A075B6N3 115 aa10.78□□□□□ -0.68
CLK3-204ENST00000483723 ISLRO14498 428 aa10.78□□□□□ -0.68
CLK3-204ENST00000483723 GGCTO75223 188 aaKnown RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms