RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 PKD1L3Q7Z443 1732 aa1.8□□□□□ -2.12
XRN1-211ENST00000477237 ARFGEF1Q9Y6D6 1849 aa1.8□□□□□ -2.12
XRN1-211ENST00000477237 MYO5AQ9Y4I1 1855 aaKnown RBP1.8□□□□□ -2.12
XRN1-211ENST00000477237 TNRC6AQ8NDV7 1962 aaKnown RBP1.79□□□□□ -2.12
XRN1-211ENST00000477237 SCN1AP35498 2009 aa1.79□□□□□ -2.12
XRN1-211ENST00000477237 CCDC88CQ9P219 2028 aa1.79□□□□□ -2.12
XRN1-211ENST00000477237 IGLV4-3A0A075B6K6 122 aa1.79□□□□□ -2.12
XRN1-211ENST00000477237 A0A087WZ39 114 aa1.79□□□□□ -2.12
XRN1-211ENST00000477237 TRAV13-1A0A0B4J241 112 aa1.79□□□□□ -2.12
XRN1-211ENST00000477237 CCL15-CCL14A0A0B4J2E2 113 aa1.79□□□□□ -2.12
XRN1-211ENST00000477237 TRBV7-7A0A0K0K1E9 115 aa1.79□□□□□ -2.12
XRN1-211ENST00000477237 GRIFINA4D1Z8 144 aa1.79□□□□□ -2.12
XRN1-211ENST00000477237 RBAKDNA6NC62 111 aa1.79□□□□□ -2.12
XRN1-211ENST00000477237 TLCD2A6NGC4 264 aa1.79□□□□□ -2.12
XRN1-211ENST00000477237 H3BMG7 143 aa1.79□□□□□ -2.12
XRN1-211ENST00000477237 SYS1-DBNDD2H3BUS1 97 aa1.79□□□□□ -2.12
XRN1-211ENST00000477237 M0R129 80 aa1.79□□□□□ -2.12
XRN1-211ENST00000477237 ANGPTL7O43827 346 aa1.79□□□□□ -2.12
XRN1-211ENST00000477237 DEDDO75618 318 aa1.79□□□□□ -2.12
XRN1-211ENST00000477237 LYZL6O75951 148 aa1.79□□□□□ -2.12
XRN1-211ENST00000477237 PTHP01270 115 aa1.79□□□□□ -2.12
XRN1-211ENST00000477237 RBP4P02753 201 aa1.79□□□□□ -2.12
XRN1-211ENST00000477237 IL5P05113 134 aa1.79□□□□□ -2.12
XRN1-211ENST00000477237 ZNF286BP0CG31 522 aa1.79□□□□□ -2.12
XRN1-211ENST00000477237 PYYP10082 97 aa1.79□□□□□ -2.12
XRN1-211ENST00000477237 ZNF32P17041 273 aa1.79□□□□□ -2.12
XRN1-211ENST00000477237 HLA-DMBP28068 263 aa1.79□□□□□ -2.12
XRN1-211ENST00000477237 SDC2P34741 201 aa1.79□□□□□ -2.12
XRN1-211ENST00000477237 SRSF9Q13242 221 aaKnown RBP eCLIP1.79□□□□□ -2.12
XRN1-211ENST00000477237 PYDC2Q56P42 97 aa1.79□□□□□ -2.12
XRN1-211ENST00000477237 SPANXN4Q5MJ08 99 aa1.79□□□□□ -2.12
XRN1-211ENST00000477237 FAM222AQ5U5X8 452 aa1.79□□□□□ -2.12
XRN1-211ENST00000477237 C1orf140Q5VVS0 124 aa1.79□□□□□ -2.12
XRN1-211ENST00000477237 SLC25A34Q6PIV7 304 aa1.79□□□□□ -2.12
XRN1-211ENST00000477237 DPPA3Q6W0C5 159 aa1.79□□□□□ -2.12
XRN1-211ENST00000477237 DNM1P46Q6ZS02 220 aa1.79□□□□□ -2.12
XRN1-211ENST00000477237 ZNF571Q7Z3V5 609 aaPredicted RBP1.79□□□□□ -2.12
XRN1-211ENST00000477237 WDR86Q86TI4 376 aa1.79□□□□□ -2.12
XRN1-211ENST00000477237 RPP25LQ8N5L8 163 aaKnown RBP1.79□□□□□ -2.12
XRN1-211ENST00000477237 ZNF564Q8TBZ8 553 aaPredicted RBP1.79□□□□□ -2.12
XRN1-211ENST00000477237 C18orf32Q8TCD1 76 aa1.79□□□□□ -2.12
XRN1-211ENST00000477237 BRK1Q8WUW1 75 aa1.79□□□□□ -2.12
XRN1-211ENST00000477237 TMEM158Q8WZ71 300 aa1.79□□□□□ -2.12
XRN1-211ENST00000477237 TMEM230Q96A57 120 aa1.79□□□□□ -2.12
XRN1-211ENST00000477237 NABP1Q96AH0 204 aa1.79□□□□□ -2.12
XRN1-211ENST00000477237 RAB37Q96AX2 223 aa1.79□□□□□ -2.12
XRN1-211ENST00000477237 GNPNAT1Q96EK6 184 aaPredicted RBP1.79□□□□□ -2.12
XRN1-211ENST00000477237 C4orf45Q96LM5 186 aa1.79□□□□□ -2.12
XRN1-211ENST00000477237 PRELID3AQ96N28 172 aa1.79□□□□□ -2.12
XRN1-211ENST00000477237 SPACA5Q96QH8 159 aa1.79□□□□□ -2.12
XRN1-211ENST00000477237 DEFB127Q9H1M4 99 aa1.79□□□□□ -2.12
XRN1-211ENST00000477237 TAAR3PQ9P1P4 343 aa1.79□□□□□ -2.12
XRN1-211ENST00000477237 RABAC1Q9UI14 185 aa1.79□□□□□ -2.12
XRN1-211ENST00000477237 COQ4Q9Y3A0 265 aa1.79□□□□□ -2.12
XRN1-211ENST00000477237 DNAJC15Q9Y5T4 150 aa1.79□□□□□ -2.12
XRN1-211ENST00000477237 C10orf71Q711Q0 1435 aa1.79□□□□□ -2.12
XRN1-211ENST00000477237 MEGF6O75095 1541 aa1.79□□□□□ -2.12
XRN1-211ENST00000477237 NEXMIFQ5QGS0 1516 aa1.79□□□□□ -2.12
XRN1-211ENST00000477237 ADGRB2O60241 1585 aa1.79□□□□□ -2.12
XRN1-211ENST00000477237 ALS2Q96Q42 1657 aa1.79□□□□□ -2.12
XRN1-211ENST00000477237 UBR1Q8IWV7 1749 aa1.79□□□□□ -2.12
XRN1-211ENST00000477237 COL14A1Q05707 1796 aaKnown RBP1.79□□□□□ -2.12
XRN1-211ENST00000477237 SCN9AQ15858 1988 aa1.78□□□□□ -2.12
XRN1-211ENST00000477237 DOCK1Q14185 1865 aa1.78□□□□□ -2.12
XRN1-211ENST00000477237 TJP1Q07157 1748 aa1.78□□□□□ -2.12
XRN1-211ENST00000477237 FAM208AQ9UK61 1670 aaKnown RBP1.78□□□□□ -2.12
XRN1-211ENST00000477237 CPS1P31327 1500 aa1.78□□□□□ -2.12
XRN1-211ENST00000477237 TRAV9-2A0A087WT02 112 aa1.78□□□□□ -2.12
XRN1-211ENST00000477237 FXYD6-FXYD2A0A087WZ82 144 aa1.78□□□□□ -2.12
XRN1-211ENST00000477237 SMIM26A0A096LP01 95 aa1.78□□□□□ -2.12
XRN1-211ENST00000477237 TRAV14DV4A0A0A6YYC5 116 aa1.78□□□□□ -2.12
XRN1-211ENST00000477237 IGKV1D-13A0A0B4J2D9 117 aa1.78□□□□□ -2.12
XRN1-211ENST00000477237 IGHV1-58A0A0C4DH39 117 aa1.78□□□□□ -2.12
XRN1-211ENST00000477237 LOC100131303A0A0U1RQF7 123 aa1.78□□□□□ -2.12
XRN1-211ENST00000477237 PGPA6NDG6 321 aa1.78□□□□□ -2.12
XRN1-211ENST00000477237 SNURFLB1AK76 121 aa1.78□□□□□ -2.12
XRN1-211ENST00000477237 UMAD1C9J7I0 102 aa1.78□□□□□ -2.12
XRN1-211ENST00000477237 C17orf112F2Z3M2 114 aa1.78□□□□□ -2.12
XRN1-211ENST00000477237 NDUFS5O43920 106 aa1.78□□□□□ -2.12
XRN1-211ENST00000477237 NDUFB2O95178 105 aa1.78□□□□□ -2.12
XRN1-211ENST00000477237 CD3DP04234 171 aa1.78□□□□□ -2.12
XRN1-211ENST00000477237 IGKV3-11P04433 115 aa1.78□□□□□ -2.12
XRN1-211ENST00000477237 CD55P08174 381 aa1.78□□□□□ -2.12
XRN1-211ENST00000477237 IGKV1-13P0DP09 117 aa1.78□□□□□ -2.12
XRN1-211ENST00000477237 FABP2P12104 132 aa1.78□□□□□ -2.12
XRN1-211ENST00000477237 TPT1P13693 172 aaKnown RBP1.78□□□□□ -2.12
XRN1-211ENST00000477237 HLA-DRB4P13762 266 aa1.78□□□□□ -2.12
XRN1-211ENST00000477237 COX7CP15954 63 aa1.78□□□□□ -2.12
XRN1-211ENST00000477237 VDAC1P21796 283 aa1.78□□□□□ -2.12
XRN1-211ENST00000477237 CBLN1P23435 193 aa1.78□□□□□ -2.12
XRN1-211ENST00000477237 TAS2R45P59539 299 aa1.78□□□□□ -2.12
XRN1-211ENST00000477237 CACNG7P62955 275 aa1.78□□□□□ -2.12
XRN1-211ENST00000477237 WFDC2Q14508 124 aa1.78□□□□□ -2.12
XRN1-211ENST00000477237 PMCHL1Q16048 86 aa1.78□□□□□ -2.12
XRN1-211ENST00000477237 MPV17L2Q567V2 206 aa1.78□□□□□ -2.12
XRN1-211ENST00000477237 Q56UQ5 140 aa1.78□□□□□ -2.12
XRN1-211ENST00000477237 CENPWQ5EE01 88 aa1.78□□□□□ -2.12
XRN1-211ENST00000477237 TMEM91Q6ZNR0 172 aa1.78□□□□□ -2.12
XRN1-211ENST00000477237 Q6ZS49 121 aa1.78□□□□□ -2.12
XRN1-211ENST00000477237 RFLNAQ6ZTI6 216 aa1.78□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms