RNA–Protein interactions for RNA: ENST00000442461.6

LIN54-202, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-202ENST00000442461 UBR3Q6ZT12 1888 aa8.43□□□□□ -1.06
LIN54-202ENST00000442461 TRAV3A0A0B4J244 114 aa8.43□□□□□ -1.06
LIN54-202ENST00000442461 CELA2AP08217 269 aa8.43□□□□□ -1.06
LIN54-202ENST00000442461 HLA-DMBP28068 263 aa8.43□□□□□ -1.06
LIN54-202ENST00000442461 SSC4DQ8WTU2 575 aa8.43□□□□□ -1.06
LIN54-202ENST00000442461 MRPL35Q9NZE8 188 aaKnown RBP8.43□□□□□ -1.06
LIN54-202ENST00000442461 DKK2Q9UBU2 259 aa8.43□□□□□ -1.06
LIN54-202ENST00000442461 GREB1Q4ZG55 1949 aa8.43□□□□□ -1.06
LIN54-202ENST00000442461 PRRG2O14669 202 aa8.43□□□□□ -1.06
LIN54-202ENST00000442461 SLC25A16P16260 332 aa8.43□□□□□ -1.06
LIN54-202ENST00000442461 ECSCRQ19T08 205 aa8.43□□□□□ -1.06
LIN54-202ENST00000442461 SBF2Q86WG5 1849 aa8.43□□□□□ -1.06
LIN54-202ENST00000442461 ROS1P08922 2347 aa8.43□□□□□ -1.06
LIN54-202ENST00000442461 SIPA1L1O43166 1804 aa8.43□□□□□ -1.06
LIN54-202ENST00000442461 IGHV3-35A0A0C4DH35 117 aa8.43□□□□□ -1.06
LIN54-202ENST00000442461 LINC00473A8K010 186 aa8.43□□□□□ -1.06
LIN54-202ENST00000442461 NDUFS7O75251 213 aa8.43□□□□□ -1.06
LIN54-202ENST00000442461 PVRIGQ6DKI7 326 aa8.43□□□□□ -1.06
LIN54-202ENST00000442461 Q6ZUT4 128 aa8.43□□□□□ -1.06
LIN54-202ENST00000442461 ATP6V0E2Q8NHE4 81 aa8.43□□□□□ -1.06
LIN54-202ENST00000442461 FGFBP3Q8TAT2 258 aa8.43□□□□□ -1.06
LIN54-202ENST00000442461 RNF125Q96EQ8 232 aa8.43□□□□□ -1.06
LIN54-202ENST00000442461 TRAV21A0A0B4J279 112 aa8.42□□□□□ -1.06
LIN54-202ENST00000442461 PMS2P5A8MQ11 134 aa8.42□□□□□ -1.06
LIN54-202ENST00000442461 CCL8P80075 99 aa8.42□□□□□ -1.06
LIN54-202ENST00000442461 MRPL20Q9BYC9 149 aaKnown RBP8.42□□□□□ -1.06
LIN54-202ENST00000442461 HIGD1BQ9P298 99 aa8.42□□□□□ -1.06
LIN54-202ENST00000442461 IGHV3-64A0A075B6Q5 118 aa8.42□□□□□ -1.06
LIN54-202ENST00000442461 TRAV17A0A0B4J275 112 aa8.42□□□□□ -1.06
LIN54-202ENST00000442461 CNTFRP26992 372 aa8.42□□□□□ -1.06
LIN54-202ENST00000442461 FAM168AQ92567 244 aa8.42□□□□□ -1.06
LIN54-202ENST00000442461 BTAF1O14981 1849 aa8.41□□□□□ -1.06
LIN54-202ENST00000442461 FOXC1Q12948 553 aa8.41□□□□□ -1.06
LIN54-202ENST00000442461 UTF1Q5T230 341 aa8.41□□□□□ -1.06
LIN54-202ENST00000442461 MOB4Q9Y3A3 225 aa8.41□□□□□ -1.06
LIN54-202ENST00000442461 MTCL1Q9Y4B5 1905 aaKnown RBP8.41□□□□□ -1.06
LIN54-202ENST00000442461 NCOR1O75376 2440 aa8.41□□□□□ -1.06
LIN54-202ENST00000442461 TMEM213A2RRL7 107 aa8.41□□□□□ -1.06
LIN54-202ENST00000442461 TM4SF5O14894 197 aa8.41□□□□□ -1.06
LIN54-202ENST00000442461 PSG7Q13046 419 aa8.41□□□□□ -1.06
LIN54-202ENST00000442461 C20orf204Q6ZNR8 217 aa8.41□□□□□ -1.06
LIN54-202ENST00000442461 COLQQ9Y215 455 aaPredicted RBP8.41□□□□□ -1.06
LIN54-202ENST00000442461 C2orf70A6NJV1 201 aa8.41□□□□□ -1.06
LIN54-202ENST00000442461 SH2D1AO60880 128 aa8.41□□□□□ -1.06
LIN54-202ENST00000442461 GLRXP35754 106 aa8.41□□□□□ -1.06
LIN54-202ENST00000442461 ZNF415Q09FC8 603 aa8.41□□□□□ -1.06
LIN54-202ENST00000442461 MRPL23Q16540 153 aaKnown RBP8.41□□□□□ -1.06
LIN54-202ENST00000442461 SLC22A18ASQ8N1D0 253 aa8.41□□□□□ -1.06
LIN54-202ENST00000442461 PRADC1Q9BSG0 188 aa8.41□□□□□ -1.06
LIN54-202ENST00000442461 IGKV3D-15A0A087WSY6 115 aa8.4□□□□□ -1.06
LIN54-202ENST00000442461 F8VRH5 84 aa8.4□□□□□ -1.06
LIN54-202ENST00000442461 IGKV3-15P01624 115 aa8.4□□□□□ -1.06
LIN54-202ENST00000442461 C3orf56Q8N813 242 aa8.4□□□□□ -1.06
LIN54-202ENST00000442461 CHCHD2Q9Y6H1 151 aaPredicted RBP8.4□□□□□ -1.06
LIN54-202ENST00000442461 POLEQ07864 2286 aa8.4□□□□□ -1.06
LIN54-202ENST00000442461 IGHV1OR15-9A0A0B4J2B8 117 aa8.4□□□□□ -1.06
LIN54-202ENST00000442461 MT-ATP8P03928 68 aa8.4□□□□□ -1.06
LIN54-202ENST00000442461 NEGR1Q7Z3B1 354 aa8.4□□□□□ -1.06
LIN54-202ENST00000442461 RNF166Q96A37 237 aaPredicted RBP8.4□□□□□ -1.06
LIN54-202ENST00000442461 TRGV9Q99603 122 aa8.4□□□□□ -1.06
LIN54-202ENST00000442461 RBMY1BA6NDE4 496 aaKnown RBP8.4□□□□□ -1.06
LIN54-202ENST00000442461 RBMY1EA6NEQ0 496 aaKnown RBP8.4□□□□□ -1.06
LIN54-202ENST00000442461 FAM90A27PA6NNH2 459 aa8.4□□□□□ -1.06
LIN54-202ENST00000442461 EFNA2O43921 213 aa8.4□□□□□ -1.06
LIN54-202ENST00000442461 PSPNO60542 156 aa8.4□□□□□ -1.06
LIN54-202ENST00000442461 RBMY1DP0C7P1 496 aaKnown RBP8.4□□□□□ -1.06
LIN54-202ENST00000442461 RBMY1A1P0DJD3 496 aaKnown RBP8.4□□□□□ -1.06
LIN54-202ENST00000442461 RBMY1CP0DJD4 496 aa8.4□□□□□ -1.06
LIN54-202ENST00000442461 FAM214BQ7L5A3 538 aa8.4□□□□□ -1.06
LIN54-202ENST00000442461 LYPD1Q8N2G4 141 aa8.4□□□□□ -1.06
LIN54-202ENST00000442461 FLVCR1-AS1Q8TAF5 88 aa8.4□□□□□ -1.06
LIN54-202ENST00000442461 C21orf62Q9NYP8 219 aa8.4□□□□□ -1.06
LIN54-202ENST00000442461 IGHG4P01861 327 aa8.4□□□□□ -1.07
LIN54-202ENST00000442461 MRPL51Q4U2R6 128 aaKnown RBP8.4□□□□□ -1.07
LIN54-202ENST00000442461 SPTBN2O15020 2390 aa8.39□□□□□ -1.07
LIN54-202ENST00000442461 IGHV3OR16-13A0A075B7E8 117 aa8.39□□□□□ -1.07
LIN54-202ENST00000442461 IGHV3-74A0A0B4J1X5 117 aa8.39□□□□□ -1.07
LIN54-202ENST00000442461 EFEMP2O95967 443 aa8.39□□□□□ -1.07
LIN54-202ENST00000442461 NDUFV3P56181 108 aaKnown RBP8.39□□□□□ -1.07
LIN54-202ENST00000442461 FAM90A1Q86YD7 464 aa8.39□□□□□ -1.07
LIN54-202ENST00000442461 GLMPQ8WWB7 406 aa8.39□□□□□ -1.07
LIN54-202ENST00000442461 TTTY12Q9BZ98 90 aa8.39□□□□□ -1.07
LIN54-202ENST00000442461 CACNA1GO43497 2377 aa8.39□□□□□ -1.07
LIN54-202ENST00000442461 IGLV3-32A0A0A0MS00 114 aa8.39□□□□□ -1.07
LIN54-202ENST00000442461 SHISA9B4DS77 424 aa8.39□□□□□ -1.07
LIN54-202ENST00000442461 CEACAM4O75871 244 aa8.39□□□□□ -1.07
LIN54-202ENST00000442461 TFF2Q03403 129 aa8.39□□□□□ -1.07
LIN54-202ENST00000442461 MORN5Q5VZ52 161 aa8.39□□□□□ -1.07
LIN54-202ENST00000442461 Q8N8P6 123 aa8.39□□□□□ -1.07
LIN54-202ENST00000442461 SPANXB1Q9NS25 103 aaPredicted RBP8.39□□□□□ -1.07
LIN54-202ENST00000442461 PTPRZ1P23471 2315 aaPredicted RBP8.39□□□□□ -1.07
LIN54-202ENST00000442461 IQCF6A8MYZ5 107 aa8.39□□□□□ -1.07
LIN54-202ENST00000442461 PRSS46E5RG02 174 aa8.39□□□□□ -1.07
LIN54-202ENST00000442461 HLA-DRB4P13762 266 aa8.39□□□□□ -1.07
LIN54-202ENST00000442461 SLC50A1Q9BRV3 221 aa8.39□□□□□ -1.07
LIN54-202ENST00000442461 TNFRSF18Q9Y5U5 241 aa8.39□□□□□ -1.07
LIN54-202ENST00000442461 HLA-DRB4X5D2U9 266 aa8.39□□□□□ -1.07
LIN54-202ENST00000442461 LINC00205P59089 165 aa8.38□□□□□ -1.07
LIN54-202ENST00000442461 MLANAQ16655 118 aa8.38□□□□□ -1.07
LIN54-202ENST00000442461 TMEM240Q5SV17 173 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms