RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 ATRAIDQ6UW56 229 aa4.7□□□□□ -1.66
HERC4-206ENST00000427635 EPDR1Q9UM22 224 aa4.7□□□□□ -1.66
HERC4-206ENST00000427635 MTCL1Q9Y4B5 1905 aaKnown RBP4.7□□□□□ -1.66
HERC4-206ENST00000427635 FOCADQ5VW36 1801 aa4.7□□□□□ -1.66
HERC4-206ENST00000427635 CEP250Q9BV73 2442 aa4.7□□□□□ -1.66
HERC4-206ENST00000427635 IGKV2-40A0A087WW87 121 aaPredicted RBP4.7□□□□□ -1.66
HERC4-206ENST00000427635 RHODO00212 210 aa4.7□□□□□ -1.66
HERC4-206ENST00000427635 MMP23AO75900 390 aa4.7□□□□□ -1.66
HERC4-206ENST00000427635 IGKV2D-40P01614 121 aaPredicted RBP4.7□□□□□ -1.66
HERC4-206ENST00000427635 PPIFP30405 207 aaKnown RBP4.7□□□□□ -1.66
HERC4-206ENST00000427635 GNG5P63218 68 aa4.7□□□□□ -1.66
HERC4-206ENST00000427635 ZNF497Q6ZNH5 498 aa4.7□□□□□ -1.66
HERC4-206ENST00000427635 FXYD1O00168 92 aa4.7□□□□□ -1.66
HERC4-206ENST00000427635 RPL18AQ02543 176 aaKnown RBP4.7□□□□□ -1.66
HERC4-206ENST00000427635 GAGE2EQ4V326 116 aa4.7□□□□□ -1.66
HERC4-206ENST00000427635 SPATA31B1PQ5VZV4 182 aa4.7□□□□□ -1.66
HERC4-206ENST00000427635 ANKRD29Q8N6D5 301 aa4.7□□□□□ -1.66
HERC4-206ENST00000427635 RNF183Q96D59 192 aa4.7□□□□□ -1.66
HERC4-206ENST00000427635 GTSF1LQ9H1H1 148 aa4.7□□□□□ -1.66
HERC4-206ENST00000427635 GAGE2DQ9UEU5 116 aa4.7□□□□□ -1.66
HERC4-206ENST00000427635 CHD8Q9HCK8 2581 aa4.69□□□□□ -1.66
HERC4-206ENST00000427635 IGHV2-70DA0A0C4DH43 119 aa4.69□□□□□ -1.66
HERC4-206ENST00000427635 NOTCH2Q04721 2471 aa4.69□□□□□ -1.66
HERC4-206ENST00000427635 SCO2A0A1W2PP80 73 aa4.69□□□□□ -1.66
HERC4-206ENST00000427635 PINLYPA6NC86 204 aa4.69□□□□□ -1.66
HERC4-206ENST00000427635 IGKCP01834 107 aa4.69□□□□□ -1.66
HERC4-206ENST00000427635 TRPT1Q86TN4 253 aaKnown RBP4.69□□□□□ -1.66
HERC4-206ENST00000427635 TM2D1Q9BX74 207 aa4.69□□□□□ -1.66
HERC4-206ENST00000427635 VPREB3Q9UKI3 123 aa4.69□□□□□ -1.66
HERC4-206ENST00000427635 LOC285556D6RIA3 1793 aa4.69□□□□□ -1.66
HERC4-206ENST00000427635 TRBV5-7A0A0A0MS05 114 aa4.69□□□□□ -1.66
HERC4-206ENST00000427635 HLA-DQB1P01920 261 aa4.69□□□□□ -1.66
HERC4-206ENST00000427635 MRPS18AQ9NVS2 196 aaKnown RBP4.69□□□□□ -1.66
HERC4-206ENST00000427635 LINC00271P0C7V0 271 aa4.69□□□□□ -1.66
HERC4-206ENST00000427635 NBL1P41271 181 aa4.69□□□□□ -1.66
HERC4-206ENST00000427635 SLC25A48Q6ZT89 311 aaKnown RBP4.69□□□□□ -1.66
HERC4-206ENST00000427635 TMEM243Q9BU79 118 aa4.69□□□□□ -1.66
HERC4-206ENST00000427635 Q9HAA7 133 aa4.69□□□□□ -1.66
HERC4-206ENST00000427635 ERG28Q9UKR5 140 aa4.69□□□□□ -1.66
HERC4-206ENST00000427635 KIAA1551Q9HCM1 1747 aa4.69□□□□□ -1.66
HERC4-206ENST00000427635 A0A087WWL8 130 aa4.69□□□□□ -1.66
HERC4-206ENST00000427635 TINCRA0A1B0GVN0 87 aa4.69□□□□□ -1.66
HERC4-206ENST00000427635 FOXA3P55318 350 aaPredicted RBP4.69□□□□□ -1.66
HERC4-206ENST00000427635 ADAMTSL5Q6ZMM2 481 aa4.69□□□□□ -1.66
HERC4-206ENST00000427635 OR11H7Q8NGC8 314 aa4.69□□□□□ -1.66
HERC4-206ENST00000427635 AMELYQ99218 206 aa4.69□□□□□ -1.66
HERC4-206ENST00000427635 IGLV3-12A0A075B6K2 115 aa4.68□□□□□ -1.66
HERC4-206ENST00000427635 CD164L2Q6UWJ8 174 aa4.68□□□□□ -1.66
HERC4-206ENST00000427635 SLC25A39Q9BZJ4 359 aaPredicted RBP4.68□□□□□ -1.66
HERC4-206ENST00000427635 COX11Q9Y6N1 276 aa4.68□□□□□ -1.66
HERC4-206ENST00000427635 ANKRD31Q8N7Z5 1873 aa4.68□□□□□ -1.66
HERC4-206ENST00000427635 CHKB-CPT1BH3BT56 60 aa4.68□□□□□ -1.66
HERC4-206ENST00000427635 MDKP21741 143 aaPredicted RBP4.68□□□□□ -1.66
HERC4-206ENST00000427635 PLPPR1Q8TBJ4 325 aa4.68□□□□□ -1.66
HERC4-206ENST00000427635 FANCD2OSQ96PS1 177 aa4.68□□□□□ -1.66
HERC4-206ENST00000427635 UBR3Q6ZT12 1888 aa4.68□□□□□ -1.66
HERC4-206ENST00000427635 SPTAN1Q13813 2472 aaKnown RBP4.68□□□□□ -1.66
HERC4-206ENST00000427635 TRAV9-1A0A075B6T8 112 aa4.68□□□□□ -1.66
HERC4-206ENST00000427635 NPIPB5A8MRT5 1133 aa4.68□□□□□ -1.66
HERC4-206ENST00000427635 E7EQL1 145 aa4.68□□□□□ -1.66
HERC4-206ENST00000427635 F8VVB4 439 aa4.68□□□□□ -1.66
HERC4-206ENST00000427635 F8VWA3 439 aa4.68□□□□□ -1.66
HERC4-206ENST00000427635 NDUFB8O95169 186 aa4.68□□□□□ -1.66
HERC4-206ENST00000427635 ANGP03950 147 aaKnown RBP4.68□□□□□ -1.66
HERC4-206ENST00000427635 ATP5L2Q7Z4Y8 100 aa4.68□□□□□ -1.66
HERC4-206ENST00000427635 PAQR4Q8N4S7 273 aaPredicted RBP4.68□□□□□ -1.66
HERC4-206ENST00000427635 CTHRC1Q96CG8 243 aa4.68□□□□□ -1.66
HERC4-206ENST00000427635 DEPPQ9NTK1 212 aa4.68□□□□□ -1.66
HERC4-206ENST00000427635 ICOSQ9Y6W8 199 aa4.68□□□□□ -1.66
HERC4-206ENST00000427635 ACACAQ13085 2346 aa4.68□□□□□ -1.66
HERC4-206ENST00000427635 OVOL3O00110 214 aa4.68□□□□□ -1.66
HERC4-206ENST00000427635 CCL24O00175 119 aa4.68□□□□□ -1.66
HERC4-206ENST00000427635 HEPN1Q6WQI6 88 aa4.68□□□□□ -1.66
HERC4-206ENST00000427635 GPHB5Q86YW7 130 aa4.68□□□□□ -1.66
HERC4-206ENST00000427635 LAMTOR2Q9Y2Q5 125 aa4.68□□□□□ -1.66
HERC4-206ENST00000427635 KIAA1217Q5T5P2 1943 aa4.68□□□□□ -1.66
HERC4-206ENST00000427635 PRSS29PA6NIE9 313 aa4.68□□□□□ -1.66
HERC4-206ENST00000427635 HIGD1CA8MV81 97 aa4.68□□□□□ -1.66
HERC4-206ENST00000427635 SH2D6Q7Z4S9 175 aa4.68□□□□□ -1.66
HERC4-206ENST00000427635 TRPM7Q96QT4 1865 aa4.67□□□□□ -1.66
HERC4-206ENST00000427635 TRAV5A0A0B4J249 113 aa4.67□□□□□ -1.66
HERC4-206ENST00000427635 UBE2AP49459 152 aa4.67□□□□□ -1.66
HERC4-206ENST00000427635 PRIMA1Q86XR5 153 aa4.67□□□□□ -1.66
HERC4-206ENST00000427635 OCC1Q8TAD7 63 aa4.67□□□□□ -1.66
HERC4-206ENST00000427635 CHAC1Q9BUX1 264 aa4.67□□□□□ -1.66
HERC4-206ENST00000427635 SIGLEC9Q9Y336 463 aa4.67□□□□□ -1.66
HERC4-206ENST00000427635 ZNF646O15015 1829 aaPredicted RBP4.67□□□□□ -1.66
HERC4-206ENST00000427635 PFN1P07737 140 aaKnown RBP4.67□□□□□ -1.66
HERC4-206ENST00000427635 PRR30Q53SZ7 412 aaPredicted RBP4.67□□□□□ -1.66
HERC4-206ENST00000427635 LY6G6FQ5SQ64 297 aa4.67□□□□□ -1.66
HERC4-206ENST00000427635 FAM219BQ5XKK7 198 aa4.67□□□□□ -1.66
HERC4-206ENST00000427635 Q6ZWC4 215 aa4.67□□□□□ -1.66
HERC4-206ENST00000427635 C1QL4Q86Z23 238 aa4.67□□□□□ -1.66
HERC4-206ENST00000427635 ATOH7Q8N100 152 aa4.67□□□□□ -1.66
HERC4-206ENST00000427635 A8MWV9 139 aa4.67□□□□□ -1.66
HERC4-206ENST00000427635 IGKV1D-12P01611 117 aa4.67□□□□□ -1.66
HERC4-206ENST00000427635 PRTN3P24158 256 aa4.67□□□□□ -1.66
HERC4-206ENST00000427635 RFNGQ9Y644 331 aa4.67□□□□□ -1.66
HERC4-206ENST00000427635 RBBP6Q7Z6E9 1792 aaKnown RBP4.67□□□□□ -1.66
HERC4-206ENST00000427635 C1QCP02747 245 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 168.1 ms