RNA–Protein interactions for RNA: ENST00000397728.7

LSS-202, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 4,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-202ENST00000397728 SLC17A3O00476 420 aa12.36□□□□□ -0.43
LSS-202ENST00000397728 NUDT3O95989 172 aa12.36□□□□□ -0.43
LSS-202ENST00000397728 SPATA31B1PQ5VZV4 182 aa12.36□□□□□ -0.43
LSS-202ENST00000397728 MGST2Q99735 147 aa12.36□□□□□ -0.43
LSS-202ENST00000397728 TRAV21A0A0B4J279 112 aa12.35□□□□□ -0.43
LSS-202ENST00000397728 TMEM191AQ9H0A3 160 aa12.35□□□□□ -0.43
LSS-202ENST00000397728 SEPSECSQ9HD40 501 aaKnown RBP12.35□□□□□ -0.43
LSS-202ENST00000397728 FBLL1A6NHQ2 334 aaKnown RBP12.35□□□□□ -0.43
LSS-202ENST00000397728 SCGB1D4Q6XE38 83 aa12.35□□□□□ -0.43
LSS-202ENST00000397728 PCNX3Q9H6A9 2034 aa12.35□□□□□ -0.43
LSS-202ENST00000397728 TAS2R60P59551 318 aa12.35□□□□□ -0.43
LSS-202ENST00000397728 PRRC2AP48634 2157 aaKnown RBP12.35□□□□□ -0.43
LSS-202ENST00000397728 SNCGO76070 127 aa12.35□□□□□ -0.43
LSS-202ENST00000397728 IGFL4Q6B9Z1 124 aa12.35□□□□□ -0.43
LSS-202ENST00000397728 C22orf34Q6ZV56 151 aa12.35□□□□□ -0.43
LSS-202ENST00000397728 LINC00469Q8N7U9 141 aa12.35□□□□□ -0.43
LSS-202ENST00000397728 GPR61Q9BZJ8 451 aa12.35□□□□□ -0.43
LSS-202ENST00000397728 ABCA12Q86UK0 2595 aa12.35□□□□□ -0.43
LSS-202ENST00000397728 CENPVL3A0A0U1RRI6 287 aa12.34□□□□□ -0.43
LSS-202ENST00000397728 DPH3Q96FX2 82 aa12.34□□□□□ -0.43
LSS-202ENST00000397728 IGKV2-40A0A087WW87 121 aaPredicted RBP12.34□□□□□ -0.43
LSS-202ENST00000397728 IGKV2D-40P01614 121 aaPredicted RBP12.34□□□□□ -0.43
LSS-202ENST00000397728 C9orf139Q6ZV77 190 aa12.34□□□□□ -0.43
LSS-202ENST00000397728 FER1L6-AS1Q8NA97 138 aa12.34□□□□□ -0.43
LSS-202ENST00000397728 ZNF106Q9H2Y7 1883 aaKnown RBP12.34□□□□□ -0.43
LSS-202ENST00000397728 PPIFP30405 207 aaKnown RBP12.34□□□□□ -0.43
LSS-202ENST00000397728 FXYD7P58549 80 aa12.34□□□□□ -0.43
LSS-202ENST00000397728 UBE2E2Q96LR5 201 aa12.34□□□□□ -0.43
LSS-202ENST00000397728 TMEM14BQ9NUH8 114 aa12.34□□□□□ -0.43
LSS-202ENST00000397728 HSPB8Q9UJY1 196 aa12.34□□□□□ -0.43
LSS-202ENST00000397728 DNAH12Q6ZR08 3092 aa12.34□□□□□ -0.43
LSS-202ENST00000397728 PACRGQ96M98 296 aaPredicted RBP12.34□□□□□ -0.43
LSS-202ENST00000397728 NDUFA4L2Q9NRX3 87 aa12.34□□□□□ -0.43
LSS-202ENST00000397728 KRTAP27-1Q3LI81 207 aa12.33□□□□□ -0.44
LSS-202ENST00000397728 TNRC6AQ8NDV7 1962 aaKnown RBP12.33□□□□□ -0.44
LSS-202ENST00000397728 TRGV4A0A0C4DH28 118 aa12.33□□□□□ -0.44
LSS-202ENST00000397728 DEFB131AP59861 70 aa12.33□□□□□ -0.44
LSS-202ENST00000397728 VN1R17PQ8TDU5 208 aa12.33□□□□□ -0.44
LSS-202ENST00000397728 MRPL18Q9H0U6 180 aaKnown RBP12.33□□□□□ -0.44
LSS-202ENST00000397728 A0A1B0GUT8 65 aa12.33□□□□□ -0.44
LSS-202ENST00000397728 NPIPB5A8MRT5 1133 aa12.33□□□□□ -0.44
LSS-202ENST00000397728 TOMM40O96008 361 aa12.33□□□□□ -0.44
LSS-202ENST00000397728 FOXA3P55318 350 aaPredicted RBP12.33□□□□□ -0.44
LSS-202ENST00000397728 HBBP68871 147 aa12.33□□□□□ -0.44
LSS-202ENST00000397728 REC114Q7Z4M0 266 aa12.33□□□□□ -0.44
LSS-202ENST00000397728 TMEM183AQ8IXX5 376 aa12.33□□□□□ -0.44
LSS-202ENST00000397728 ZNF502Q8TBZ5 544 aa12.33□□□□□ -0.44
LSS-202ENST00000397728 RPP21Q9H633 154 aaKnown RBP12.33□□□□□ -0.44
LSS-202ENST00000397728 SRRM4A7MD48 611 aaKnown RBP12.32□□□□□ -0.44
LSS-202ENST00000397728 GUSBP1Q15486 140 aa12.32□□□□□ -0.44
LSS-202ENST00000397728 TMEM95Q3KNT9 176 aa12.32□□□□□ -0.44
LSS-202ENST00000397728 ZFP36P26651 326 aaKnown RBP12.32□□□□□ -0.44
LSS-202ENST00000397728 Q8NFD4 153 aa12.32□□□□□ -0.44
LSS-202ENST00000397728 SRP19P09132 144 aaKnown RBP12.32□□□□□ -0.44
LSS-202ENST00000397728 TMEM97Q5BJF2 176 aa12.32□□□□□ -0.44
LSS-202ENST00000397728 TMEM50AO95807 157 aa12.32□□□□□ -0.44
LSS-202ENST00000397728 OR11H6Q8NGC7 330 aa12.32□□□□□ -0.44
LSS-202ENST00000397728 SRIP30626 198 aa12.31□□□□□ -0.44
LSS-202ENST00000397728 ELANEP08246 267 aa12.31□□□□□ -0.44
LSS-202ENST00000397728 STAG3L2P0CL84 134 aa12.31□□□□□ -0.44
LSS-202ENST00000397728 STAG3L3P0CL85 134 aa12.31□□□□□ -0.44
LSS-202ENST00000397728 JKAMPQ9P055 326 aa12.31□□□□□ -0.44
LSS-202ENST00000397728 ZFP30Q9Y2G7 519 aa12.31□□□□□ -0.44
LSS-202ENST00000397728 TRGC2P03986 189 aa12.31□□□□□ -0.44
LSS-202ENST00000397728 CCL20P78556 96 aa12.31□□□□□ -0.44
LSS-202ENST00000397728 TCTAP57738 103 aa12.3□□□□□ -0.44
LSS-202ENST00000397728 WT1-ASQ06250 92 aa12.3□□□□□ -0.44
LSS-202ENST00000397728 PRO1933Q9H354 126 aa12.3□□□□□ -0.44
LSS-202ENST00000397728 ZNF25P17030 456 aaPredicted RBP12.3□□□□□ -0.44
LSS-202ENST00000397728 RPP25LQ8N5L8 163 aaKnown RBP12.3□□□□□ -0.44
LSS-202ENST00000397728 TBX15Q96SF7 602 aa12.3□□□□□ -0.44
LSS-202ENST00000397728 ZNF324O75467 553 aaPredicted RBP12.3□□□□□ -0.44
LSS-202ENST00000397728 RIPPLY3P57055 190 aa12.3□□□□□ -0.44
LSS-202ENST00000397728 WFDC11Q8NEX6 87 aa12.3□□□□□ -0.44
LSS-202ENST00000397728 RNASE7Q9H1E1 156 aaKnown RBP12.3□□□□□ -0.44
LSS-202ENST00000397728 RFNGQ9Y644 331 aa12.3□□□□□ -0.44
LSS-202ENST00000397728 TGIF2-C20orf24A0A0A6YYL0 155 aa12.3□□□□□ -0.44
LSS-202ENST00000397728 TCTEX1D4Q5JR98 221 aa12.3□□□□□ -0.44
LSS-202ENST00000397728 AP5S1Q9NUS5 200 aa12.3□□□□□ -0.44
LSS-202ENST00000397728 TNCP24821 2201 aa12.3□□□□□ -0.44
LSS-202ENST00000397728 CRXO43186 299 aaPredicted RBP12.29□□□□□ -0.44
LSS-202ENST00000397728 BLCAPP62952 87 aa12.29□□□□□ -0.44
LSS-202ENST00000397728 NRN1Q9NPD7 142 aa12.29□□□□□ -0.44
LSS-202ENST00000397728 SRSF4Q08170 494 aaKnown RBP12.29□□□□□ -0.44
LSS-202ENST00000397728 C1QTNF4Q9BXJ3 329 aa12.29□□□□□ -0.44
LSS-202ENST00000397728 EML6Q6ZMW3 1958 aa12.29□□□□□ -0.44
LSS-202ENST00000397728 TRGV11A0A075B6L2 103 aa12.29□□□□□ -0.44
LSS-202ENST00000397728 TRAV12-3A0A0B4J271 114 aa12.29□□□□□ -0.44
LSS-202ENST00000397728 PGPEP1LA6NFU8 196 aa12.29□□□□□ -0.44
LSS-202ENST00000397728 COL5A1-AS1Q5SY13 56 aa12.29□□□□□ -0.44
LSS-202ENST00000397728 ZNF256Q9Y2P7 627 aaPredicted RBP12.29□□□□□ -0.44
LSS-202ENST00000397728 SETD2Q9BYW2 2564 aaPredicted RBP12.29□□□□□ -0.44
LSS-202ENST00000397728 K7ERU9 68 aa12.29□□□□□ -0.44
LSS-202ENST00000397728 IGKV1-39P01597 117 aa12.29□□□□□ -0.44
LSS-202ENST00000397728 IGKV1D-39P04432 117 aa12.29□□□□□ -0.44
LSS-202ENST00000397728 CBLN1P23435 193 aa12.29□□□□□ -0.44
LSS-202ENST00000397728 TMEM136Q6ZRR5 245 aa12.29□□□□□ -0.44
LSS-202ENST00000397728 ARL6IP6Q8N6S5 226 aa12.29□□□□□ -0.44
LSS-202ENST00000397728 LCN12Q6JVE5 192 aa12.28□□□□□ -0.44
LSS-202ENST00000397728 Q8TAT8 98 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms