RNA–Protein interactions for RNA: ENST00000379237.6

USP6NL-202, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP6NL, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-202ENST00000379237 NPIPB5A8MRT5 1133 aa8.9□□□□□ -0.98
USP6NL-202ENST00000379237 CD69Q07108 199 aa8.9□□□□□ -0.98
USP6NL-202ENST00000379237 TRBV25-1A0A075B6N4 114 aa8.9□□□□□ -0.99
USP6NL-202ENST00000379237 IGLV3-32A0A0A0MS00 114 aa8.9□□□□□ -0.99
USP6NL-202ENST00000379237 RPL13AP40429 203 aaKnown RBP8.9□□□□□ -0.99
USP6NL-202ENST00000379237 SRSF6Q13247 344 aaKnown RBP8.9□□□□□ -0.99
USP6NL-202ENST00000379237 GCSAMQ8N6F7 178 aa8.9□□□□□ -0.99
USP6NL-202ENST00000379237 FGF23Q9GZV9 251 aaPredicted RBP8.9□□□□□ -0.99
USP6NL-202ENST00000379237 SIGLEC8Q9NYZ4 499 aa8.9□□□□□ -0.99
USP6NL-202ENST00000379237 JPT1Q9UK76 154 aa8.9□□□□□ -0.99
USP6NL-202ENST00000379237 TNCP24821 2201 aa8.89□□□□□ -0.99
USP6NL-202ENST00000379237 EVI2AP22794 236 aa8.89□□□□□ -0.99
USP6NL-202ENST00000379237 GATA3P23771 443 aa8.89□□□□□ -0.99
USP6NL-202ENST00000379237 BEX4Q9NWD9 120 aaPredicted RBP8.89□□□□□ -0.99
USP6NL-202ENST00000379237 IFITM1P13164 125 aa8.89□□□□□ -0.99
USP6NL-202ENST00000379237 MPV17P39210 176 aa8.89□□□□□ -0.99
USP6NL-202ENST00000379237 FOXG1P55316 489 aaPredicted RBP8.89□□□□□ -0.99
USP6NL-202ENST00000379237 HIGD1AQ9Y241 93 aa8.89□□□□□ -0.99
USP6NL-202ENST00000379237 TRGV8A0A0C4DH27 118 aa8.89□□□□□ -0.99
USP6NL-202ENST00000379237 FAM90A9PA6NNJ1 464 aa8.89□□□□□ -0.99
USP6NL-202ENST00000379237 CCL11P51671 97 aa8.89□□□□□ -0.99
USP6NL-202ENST00000379237 PEAR1Q5VY43 1037 aaPredicted RBP8.89□□□□□ -0.99
USP6NL-202ENST00000379237 CXXC4Q9H2H0 198 aa8.89□□□□□ -0.99
USP6NL-202ENST00000379237 RRN3P1Q2M238 152 aa8.88□□□□□ -0.99
USP6NL-202ENST00000379237 C3orf56Q8N813 242 aa8.88□□□□□ -0.99
USP6NL-202ENST00000379237 OR10X1Q8NGY0 326 aa8.88□□□□□ -0.99
USP6NL-202ENST00000379237 URB1-AS1Q96HZ7 61 aa8.88□□□□□ -0.99
USP6NL-202ENST00000379237 TCRAP04437 139 aa8.88□□□□□ -0.99
USP6NL-202ENST00000379237 MEIG1Q5JSS6 88 aa8.88□□□□□ -0.99
USP6NL-202ENST00000379237 PTH2Q96A98 100 aa8.88□□□□□ -0.99
USP6NL-202ENST00000379237 ONECUT1Q9UBC0 465 aa8.88□□□□□ -0.99
USP6NL-202ENST00000379237 KLF12Q9Y4X4 402 aa8.88□□□□□ -0.99
USP6NL-202ENST00000379237 TRAV40A0A0B4J280 105 aa8.88□□□□□ -0.99
USP6NL-202ENST00000379237 SLC25A2Q9BXI2 301 aa8.88□□□□□ -0.99
USP6NL-202ENST00000379237 LINC01549A6NIU2 74 aa8.88□□□□□ -0.99
USP6NL-202ENST00000379237 TRIP6Q15654 476 aaKnown RBP8.88□□□□□ -0.99
USP6NL-202ENST00000379237 FAM120AOSQ5T036 256 aa8.88□□□□□ -0.99
USP6NL-202ENST00000379237 VKORC1Q9BQB6 163 aa8.88□□□□□ -0.99
USP6NL-202ENST00000379237 ATP5LO75964 103 aa8.87□□□□□ -0.99
USP6NL-202ENST00000379237 FOXE3Q13461 319 aa8.87□□□□□ -0.99
USP6NL-202ENST00000379237 VWCEQ96DN2 955 aa8.87□□□□□ -0.99
USP6NL-202ENST00000379237 RAXQ9Y2V3 346 aa8.87□□□□□ -0.99
USP6NL-202ENST00000379237 WNK2Q9Y3S1 2297 aa8.87□□□□□ -0.99
USP6NL-202ENST00000379237 CD40P25942 277 aa8.87□□□□□ -0.99
USP6NL-202ENST00000379237 GFRA4Q9GZZ7 299 aa8.87□□□□□ -0.99
USP6NL-202ENST00000379237 FBXL15Q9H469 300 aa8.87□□□□□ -0.99
USP6NL-202ENST00000379237 ARFGEF3Q5TH69 2177 aa8.87□□□□□ -0.99
USP6NL-202ENST00000379237 ZGRF1Q86YA3 2104 aa8.87□□□□□ -0.99
USP6NL-202ENST00000379237 TMEM8BA6NDV4 472 aa8.87□□□□□ -0.99
USP6NL-202ENST00000379237 ZNF688P0C7X2 276 aa8.87□□□□□ -0.99
USP6NL-202ENST00000379237 MORN5Q5VZ52 161 aa8.87□□□□□ -0.99
USP6NL-202ENST00000379237 CACNG8Q8WXS5 425 aa8.87□□□□□ -0.99
USP6NL-202ENST00000379237 CALYQ9NYX4 217 aa8.87□□□□□ -0.99
USP6NL-202ENST00000379237 ROS1P08922 2347 aa8.87□□□□□ -0.99
USP6NL-202ENST00000379237 CACNA1HO95180 2353 aa8.87□□□□□ -0.99
USP6NL-202ENST00000379237 POLEQ07864 2286 aa8.87□□□□□ -0.99
USP6NL-202ENST00000379237 NDUFS7O75251 213 aa8.86□□□□□ -0.99
USP6NL-202ENST00000379237 LYZL6O75951 148 aa8.86□□□□□ -0.99
USP6NL-202ENST00000379237 TNFRSF1AP19438 455 aa8.86□□□□□ -0.99
USP6NL-202ENST00000379237 RPL32P62910 135 aaKnown RBP8.86□□□□□ -0.99
USP6NL-202ENST00000379237 CT83Q5H943 113 aa8.86□□□□□ -0.99
USP6NL-202ENST00000379237 Q6AWC8 147 aa8.86□□□□□ -0.99
USP6NL-202ENST00000379237 EXOC3-AS1Q8N2X6 119 aa8.86□□□□□ -0.99
USP6NL-202ENST00000379237 A0A1B0GXF2 115 aa8.86□□□□□ -0.99
USP6NL-202ENST00000379237 TMEM213A2RRL7 107 aa8.86□□□□□ -0.99
USP6NL-202ENST00000379237 HAX1O00165 279 aa8.86□□□□□ -0.99
USP6NL-202ENST00000379237 PRCDQ00LT1 54 aa8.86□□□□□ -0.99
USP6NL-202ENST00000379237 TMEM155Q4W5P6 130 aa8.86□□□□□ -0.99
USP6NL-202ENST00000379237 LYZL1Q6UWQ5 148 aa8.86□□□□□ -0.99
USP6NL-202ENST00000379237 NGBQ9NPG2 151 aa8.86□□□□□ -0.99
USP6NL-202ENST00000379237 TTC28Q96AY4 2481 aa8.86□□□□□ -0.99
USP6NL-202ENST00000379237 WDFY3Q8IZQ1 3526 aa8.86□□□□□ -0.99
USP6NL-202ENST00000379237 RFPL3SP0C7P2 107 aa8.86□□□□□ -0.99
USP6NL-202ENST00000379237 FAM106CPP0CH98 169 aa8.86□□□□□ -0.99
USP6NL-202ENST00000379237 LOXL3P58215 753 aa8.86□□□□□ -0.99
USP6NL-202ENST00000379237 FAM106AQ4KMX7 169 aa8.86□□□□□ -0.99
USP6NL-202ENST00000379237 ZNF562Q6V9R5 426 aa8.86□□□□□ -0.99
USP6NL-202ENST00000379237 Q8N7P7 452 aa8.86□□□□□ -0.99
USP6NL-202ENST00000379237 ZNRF1Q8ND25 227 aa8.86□□□□□ -0.99
USP6NL-202ENST00000379237 MBD6Q96DN6 1003 aa8.86□□□□□ -0.99
USP6NL-202ENST00000379237 MAGEA5P43359 124 aa8.86□□□□□ -0.99
USP6NL-202ENST00000379237 PPP1R27Q86WC6 154 aa8.86□□□□□ -0.99
USP6NL-202ENST00000379237 C10orf126Q8N4M7 172 aa8.86□□□□□ -0.99
USP6NL-202ENST00000379237 MAFAQ8NHW3 353 aaPredicted RBP8.86□□□□□ -0.99
USP6NL-202ENST00000379237 ZNF714Q96N38 554 aa8.86□□□□□ -0.99
USP6NL-202ENST00000379237 ARRDC1-AS1Q9H2J1 176 aa8.86□□□□□ -0.99
USP6NL-202ENST00000379237 DYNLRB1Q9NP97 96 aa8.86□□□□□ -0.99
USP6NL-202ENST00000379237 MUC3AQ02505 3323 aa8.86□□□□□ -0.99
USP6NL-202ENST00000379237 PRUNE2Q8WUY3 3088 aa8.85□□□□□ -0.99
USP6NL-202ENST00000379237 A0A1W2PQM1 296 aa8.85□□□□□ -0.99
USP6NL-202ENST00000379237 LOXL1Q08397 574 aaPredicted RBP8.85□□□□□ -0.99
USP6NL-202ENST00000379237 VMA21Q3ZAQ7 101 aa8.85□□□□□ -0.99
USP6NL-202ENST00000379237 METRNQ9UJH8 293 aa8.85□□□□□ -0.99
USP6NL-202ENST00000379237 FOXA2Q9Y261 457 aaPredicted RBP8.85□□□□□ -0.99
USP6NL-202ENST00000379237 TSPAN13O95857 204 aa8.85□□□□□ -0.99
USP6NL-202ENST00000379237 XGP55808 180 aa8.85□□□□□ -0.99
USP6NL-202ENST00000379237 ZNF503Q96F45 646 aa8.85□□□□□ -0.99
USP6NL-202ENST00000379237 FREM1Q5H8C1 2179 aa8.85□□□□□ -0.99
USP6NL-202ENST00000379237 WDR87Q6ZQQ6 2873 aa8.85□□□□□ -0.99
USP6NL-202ENST00000379237 M0R3E3 92 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms