RNA–Protein interactions for RNA: ENST00000378536.4

SKI-201, Transcript of SKI proto-oncogene, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKI, Length 5,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKI-201ENST00000378536 IGHV4-61A0A0C4DH41 118 aa17■□□□□ 0.31
SKI-201ENST00000378536 YPEL3P61236 119 aaPredicted RBP17■□□□□ 0.31
SKI-201ENST00000378536 SYNJ2BPP57105 145 aa17■□□□□ 0.31
SKI-201ENST00000378536 CACNG7P62955 275 aa17■□□□□ 0.31
SKI-201ENST00000378536 GUSBP1Q15486 140 aa17■□□□□ 0.31
SKI-201ENST00000378536 FAM120AOSQ5T036 256 aa17■□□□□ 0.31
SKI-201ENST00000378536 LYPD6Q86Y78 171 aa17■□□□□ 0.31
SKI-201ENST00000378536 APOHP02749 345 aaPredicted RBP16.99■□□□□ 0.31
SKI-201ENST00000378536 PKIAP61925 76 aa16.99■□□□□ 0.31
SKI-201ENST00000378536 TMEM183AQ8IXX5 376 aa16.99■□□□□ 0.31
SKI-201ENST00000378536 TSKUQ8WUA8 353 aa16.99■□□□□ 0.31
SKI-201ENST00000378536 WT1-ASQ06250 92 aa16.98■□□□□ 0.31
SKI-201ENST00000378536 IGHV4-30-2A0A087WSY4 118 aa16.98■□□□□ 0.31
SKI-201ENST00000378536 ZNF138P52744 262 aa16.98■□□□□ 0.31
SKI-201ENST00000378536 LCN12Q6JVE5 192 aa16.98■□□□□ 0.31
SKI-201ENST00000378536 NUDT10Q8NFP7 164 aa16.98■□□□□ 0.31
SKI-201ENST00000378536 OR11H6Q8NGC7 330 aa16.98■□□□□ 0.31
SKI-201ENST00000378536 NUDT11Q96G61 164 aa16.98■□□□□ 0.31
SKI-201ENST00000378536 SRRM4A7MD48 611 aaKnown RBP16.98■□□□□ 0.31
SKI-201ENST00000378536 TMEM262E9PQX1 116 aa16.98■□□□□ 0.31
SKI-201ENST00000378536 POU2AF1Q16633 256 aa16.98■□□□□ 0.31
SKI-201ENST00000378536 RNF151Q2KHN1 245 aa16.98■□□□□ 0.31
SKI-201ENST00000378536 PPIFP30405 207 aaKnown RBP16.97■□□□□ 0.31
SKI-201ENST00000378536 DERL1Q9BUN8 251 aa16.97■□□□□ 0.31
SKI-201ENST00000378536 LYRM7Q5U5X0 104 aa16.97■□□□□ 0.31
SKI-201ENST00000378536 F2Z2F3 143 aa16.96■□□□□ 0.31
SKI-201ENST00000378536 LINC00477Q96M19 166 aa16.96■□□□□ 0.31
SKI-201ENST00000378536 WNK2Q9Y3S1 2297 aa16.96■□□□□ 0.31
SKI-201ENST00000378536 FCN3O75636 299 aa16.96■□□□□ 0.31
SKI-201ENST00000378536 PSG3Q16557 428 aa16.96■□□□□ 0.31
SKI-201ENST00000378536 IL17RELQ6ZVW7 336 aa16.96■□□□□ 0.31
SKI-201ENST00000378536 SPATA45Q537H7 98 aa16.95■□□□□ 0.3
SKI-201ENST00000378536 TCF23Q7RTU1 214 aa16.95■□□□□ 0.3
SKI-201ENST00000378536 C10orf105Q8TEF2 133 aa16.95■□□□□ 0.3
SKI-201ENST00000378536 SSBP4Q9BWG4 385 aaPredicted RBP16.95■□□□□ 0.3
SKI-201ENST00000378536 IGKV3OR2-268A0A0C4DH90 116 aa16.95■□□□□ 0.3
SKI-201ENST00000378536 CA1P00915 261 aaPredicted RBP16.95■□□□□ 0.3
SKI-201ENST00000378536 HTN3P15516 51 aa16.95■□□□□ 0.3
SKI-201ENST00000378536 IGFL4Q6B9Z1 124 aa16.95■□□□□ 0.3
SKI-201ENST00000378536 C1QL4Q86Z23 238 aa16.95■□□□□ 0.3
SKI-201ENST00000378536 TMEM101Q96IK0 257 aa16.95■□□□□ 0.3
SKI-201ENST00000378536 DTX2Q86UW9 622 aa16.95■□□□□ 0.3
SKI-201ENST00000378536 HOXA3O43365 443 aaPredicted RBP16.95■□□□□ 0.3
SKI-201ENST00000378536 OR10J3Q5JRS4 329 aa16.95■□□□□ 0.3
SKI-201ENST00000378536 LINC01619G3V211 115 aa16.94■□□□□ 0.3
SKI-201ENST00000378536 LINC01551Q86U37 167 aa16.94■□□□□ 0.3
SKI-201ENST00000378536 GEMIN7Q9H840 131 aaKnown RBP16.94■□□□□ 0.3
SKI-201ENST00000378536 PSMB2P49721 201 aa16.94■□□□□ 0.3
SKI-201ENST00000378536 PDE6HQ13956 83 aa16.94■□□□□ 0.3
SKI-201ENST00000378536 ACTL10Q5JWF8 245 aa16.94■□□□□ 0.3
SKI-201ENST00000378536 Q71RC1 249 aaPredicted RBP16.94■□□□□ 0.3
SKI-201ENST00000378536 ZMAT5Q9UDW3 170 aaKnown RBP16.94■□□□□ 0.3
SKI-201ENST00000378536 MIEN1Q9BRT3 115 aa16.94■□□□□ 0.3
SKI-201ENST00000378536 TMEM242Q9NWH2 141 aa16.94■□□□□ 0.3
SKI-201ENST00000378536 RPL13AP40429 203 aaKnown RBP16.93■□□□□ 0.3
SKI-201ENST00000378536 C7orf71A4D174 169 aa16.93■□□□□ 0.3
SKI-201ENST00000378536 OR11H12B2RN74 326 aa16.93■□□□□ 0.3
SKI-201ENST00000378536 A6NDN8 102 aa16.93■□□□□ 0.3
SKI-201ENST00000378536 MSMPQ1L6U9 139 aa16.93■□□□□ 0.3
SKI-201ENST00000378536 DEFB112Q30KQ8 113 aa16.93■□□□□ 0.3
SKI-201ENST00000378536 C3orf56Q8N813 242 aa16.93■□□□□ 0.3
SKI-201ENST00000378536 DOCK10Q96BY6 2186 aa16.93■□□□□ 0.3
SKI-201ENST00000378536 TMEM70Q9BUB7 260 aa16.93■□□□□ 0.3
SKI-201ENST00000378536 H3BVH4 76 aa16.92■□□□□ 0.3
SKI-201ENST00000378536 Q8TAT8 98 aa16.92■□□□□ 0.3
SKI-201ENST00000378536 C18orf15Q96N68 181 aa16.92■□□□□ 0.3
SKI-201ENST00000378536 LY96Q9Y6Y9 160 aa16.92■□□□□ 0.3
SKI-201ENST00000378536 NRGNQ92686 78 aa16.92■□□□□ 0.3
SKI-201ENST00000378536 NRN1Q9NPD7 142 aa16.92■□□□□ 0.3
SKI-201ENST00000378536 ATP5L2Q7Z4Y8 100 aa16.91■□□□□ 0.3
SKI-201ENST00000378536 ZNF256Q9Y2P7 627 aaPredicted RBP16.91■□□□□ 0.3
SKI-201ENST00000378536 MALRD1Q5VYJ5 2156 aa16.91■□□□□ 0.3
SKI-201ENST00000378536 LGALS3P17931 250 aaKnown RBP16.91■□□□□ 0.3
SKI-201ENST00000378536 ZNF414Q96IQ9 312 aa16.91■□□□□ 0.3
SKI-201ENST00000378536 VPS25Q9BRG1 176 aa16.91■□□□□ 0.3
SKI-201ENST00000378536 JKAMPQ9P055 326 aa16.91■□□□□ 0.3
SKI-201ENST00000378536 NUP210LQ5VU65 1888 aa16.91■□□□□ 0.3
SKI-201ENST00000378536 SCGB3A1Q96QR1 104 aa16.91■□□□□ 0.3
SKI-201ENST00000378536 ST20Q9HBF5 79 aa16.91■□□□□ 0.3
SKI-201ENST00000378536 J3QR89 54 aa16.91■□□□□ 0.3
SKI-201ENST00000378536 ATP5LO75964 103 aa16.91■□□□□ 0.3
SKI-201ENST00000378536 TMEM170AQ8WVE7 144 aa16.91■□□□□ 0.3
SKI-201ENST00000378536 GNB1LQ9BYB4 327 aa16.9■□□□□ 0.3
SKI-201ENST00000378536 ADMP35318 185 aa16.9■□□□□ 0.3
SKI-201ENST00000378536 TTC9CQ8N5M4 171 aa16.9■□□□□ 0.3
SKI-201ENST00000378536 GZMBP10144 247 aa16.9■□□□□ 0.3
SKI-201ENST00000378536 TMEM249Q2WGJ8 235 aa16.9■□□□□ 0.3
SKI-201ENST00000378536 VPREB3Q9UKI3 123 aa16.9■□□□□ 0.3
SKI-201ENST00000378536 PPBPP02775 128 aa16.89■□□□□ 0.29
SKI-201ENST00000378536 GCSHP23434 173 aa16.89■□□□□ 0.29
SKI-201ENST00000378536 TRAV8-1A0A0A6YYK1 113 aa16.89■□□□□ 0.29
SKI-201ENST00000378536 NDUFA4O00483 81 aa16.89■□□□□ 0.29
SKI-201ENST00000378536 CRXO43186 299 aaPredicted RBP16.89■□□□□ 0.29
SKI-201ENST00000378536 SH2D1AO60880 128 aa16.89■□□□□ 0.29
SKI-201ENST00000378536 FAM208BQ5VWN6 2430 aa16.88■□□□□ 0.29
SKI-201ENST00000378536 TRAV12-3A0A0B4J271 114 aa16.88■□□□□ 0.29
SKI-201ENST00000378536 IGHV4-59P01825 116 aa16.88■□□□□ 0.29
SKI-201ENST00000378536 OR4C5Q8NGB2 326 aa16.88■□□□□ 0.29
SKI-201ENST00000378536 TRGV4A0A0C4DH28 118 aa16.87■□□□□ 0.29
SKI-201ENST00000378536 CENPVL3A0A0U1RRI6 287 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms