RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 HIGD1CA8MV81 97 aa5.06□□□□□ -1.6
PRKDC-202ENST00000338368 GPX1P07203 203 aa5.06□□□□□ -1.6
PRKDC-202ENST00000338368 TMEM116Q8NCL8 245 aa5.06□□□□□ -1.6
PRKDC-202ENST00000338368 SSBP4Q9BWG4 385 aaPredicted RBP5.06□□□□□ -1.6
PRKDC-202ENST00000338368 NPIPB6E9PJ23 425 aa5.06□□□□□ -1.6
PRKDC-202ENST00000338368 IGHV2-70P01814 119 aa5.06□□□□□ -1.6
PRKDC-202ENST00000338368 UBE2E1P51965 193 aa5.06□□□□□ -1.6
PRKDC-202ENST00000338368 TM4SF20Q53R12 229 aa5.06□□□□□ -1.6
PRKDC-202ENST00000338368 TBL2Q9Y4P3 447 aaKnown RBP5.06□□□□□ -1.6
PRKDC-202ENST00000338368 BTF3P20290 206 aaKnown RBP5.06□□□□□ -1.6
PRKDC-202ENST00000338368 DGAT2L7PQ6IED9 249 aa5.06□□□□□ -1.6
PRKDC-202ENST00000338368 EXOC3-AS1Q8N2X6 119 aa5.06□□□□□ -1.6
PRKDC-202ENST00000338368 MYOZ3Q8TDC0 251 aa5.06□□□□□ -1.6
PRKDC-202ENST00000338368 C22orf46C9J442 243 aa5.06□□□□□ -1.6
PRKDC-202ENST00000338368 GFI1BQ5VTD9 330 aa5.06□□□□□ -1.6
PRKDC-202ENST00000338368 TMEM219Q86XT9 240 aa5.06□□□□□ -1.6
PRKDC-202ENST00000338368 M0R3E3 92 aa5.06□□□□□ -1.6
PRKDC-202ENST00000338368 VWC2Q2TAL6 325 aa5.06□□□□□ -1.6
PRKDC-202ENST00000338368 FAM159AQ6UWV7 190 aa5.06□□□□□ -1.6
PRKDC-202ENST00000338368 FAM19A2Q8N3H0 131 aa5.06□□□□□ -1.6
PRKDC-202ENST00000338368 TSKUQ8WUA8 353 aa5.06□□□□□ -1.6
PRKDC-202ENST00000338368 FABP5P3A8MUU1 101 aa5.06□□□□□ -1.6
PRKDC-202ENST00000338368 Q6AWC8 147 aa5.06□□□□□ -1.6
PRKDC-202ENST00000338368 MOB4Q9Y3A3 225 aa5.06□□□□□ -1.6
PRKDC-202ENST00000338368 SLC50A1Q9BRV3 221 aa5.06□□□□□ -1.6
PRKDC-202ENST00000338368 HSPB8Q9UJY1 196 aa5.06□□□□□ -1.6
PRKDC-202ENST00000338368 LRP4O75096 1905 aa5.06□□□□□ -1.6
PRKDC-202ENST00000338368 IFITM10A6NMD0 228 aa5.06□□□□□ -1.6
PRKDC-202ENST00000338368 ADORA2A-AS1P86434 159 aa5.06□□□□□ -1.6
PRKDC-202ENST00000338368 C11orf1Q9H5F2 150 aa5.06□□□□□ -1.6
PRKDC-202ENST00000338368 OR4X2Q8NGF9 303 aa5.06□□□□□ -1.6
PRKDC-202ENST00000338368 OR10AG1Q8NH19 301 aa5.06□□□□□ -1.6
PRKDC-202ENST00000338368 B4DSR2 109 aa5.06□□□□□ -1.6
PRKDC-202ENST00000338368 HIST1H1AQ02539 215 aaPredicted RBP5.06□□□□□ -1.6
PRKDC-202ENST00000338368 VAMP3Q15836 100 aa5.06□□□□□ -1.6
PRKDC-202ENST00000338368 C22orf34Q6ZV56 151 aa5.06□□□□□ -1.6
PRKDC-202ENST00000338368 HIST3H2BBQ8N257 126 aa5.06□□□□□ -1.6
PRKDC-202ENST00000338368 SRSF8Q9BRL6 282 aaKnown RBP5.06□□□□□ -1.6
PRKDC-202ENST00000338368 TECTAO75443 2155 aa5.05□□□□□ -1.6
PRKDC-202ENST00000338368 Q8NA96 180 aa5.05□□□□□ -1.6
PRKDC-202ENST00000338368 C5orf30Q96GV9 206 aa5.05□□□□□ -1.6
PRKDC-202ENST00000338368 HERVK_113P61574 105 aa5.05□□□□□ -1.6
PRKDC-202ENST00000338368 ATOH7Q8N100 152 aa5.05□□□□□ -1.6
PRKDC-202ENST00000338368 GSN-AS1Q9NRJ2 163 aa5.05□□□□□ -1.6
PRKDC-202ENST00000338368 C15orf32Q32M92 178 aa5.05□□□□□ -1.6
PRKDC-202ENST00000338368 FER1L6-AS1Q8NA97 138 aa5.05□□□□□ -1.6
PRKDC-202ENST00000338368 AP5S1Q9NUS5 200 aa5.05□□□□□ -1.6
PRKDC-202ENST00000338368 TRBV20OR9-2A0A075B6H5 130 aa5.05□□□□□ -1.6
PRKDC-202ENST00000338368 CIDEAO60543 219 aa5.05□□□□□ -1.6
PRKDC-202ENST00000338368 ERASQ7Z444 233 aa5.05□□□□□ -1.6
PRKDC-202ENST00000338368 H3BUX3 64 aa5.05□□□□□ -1.6
PRKDC-202ENST00000338368 CGB3P0DN86 165 aa5.05□□□□□ -1.6
PRKDC-202ENST00000338368 CGB7P0DN87 165 aa5.05□□□□□ -1.6
PRKDC-202ENST00000338368 TMEM97Q5BJF2 176 aa5.05□□□□□ -1.6
PRKDC-202ENST00000338368 ODF3L1Q8IXM7 274 aa5.05□□□□□ -1.6
PRKDC-202ENST00000338368 C8orf31Q8N9H6 132 aa5.05□□□□□ -1.6
PRKDC-202ENST00000338368 MCRIP2Q9BUT9 160 aaKnown RBP5.05□□□□□ -1.6
PRKDC-202ENST00000338368 PYY3Q5JQD4 70 aa5.05□□□□□ -1.6
PRKDC-202ENST00000338368 OR8A1Q8NGG7 326 aa5.05□□□□□ -1.6
PRKDC-202ENST00000338368 PRSS22Q9GZN4 317 aa5.05□□□□□ -1.6
PRKDC-202ENST00000338368 LSM4Q9Y4Z0 139 aaKnown RBP5.05□□□□□ -1.6
PRKDC-202ENST00000338368 A6NNC1 897 aa5.05□□□□□ -1.6
PRKDC-202ENST00000338368 PRELID3AQ96N28 172 aa5.05□□□□□ -1.6
PRKDC-202ENST00000338368 A0A1B0GV72 72 aa5.05□□□□□ -1.6
PRKDC-202ENST00000338368 BRWD1-AS2P59051 145 aa5.05□□□□□ -1.6
PRKDC-202ENST00000338368 FNDC4Q9H6D8 234 aaPredicted RBP5.05□□□□□ -1.6
PRKDC-202ENST00000338368 SPATA45Q537H7 98 aa5.05□□□□□ -1.6
PRKDC-202ENST00000338368 TRAV8-1A0A0A6YYK1 113 aa5.04□□□□□ -1.6
PRKDC-202ENST00000338368 NPIPB5A8MRT5 1133 aa5.04□□□□□ -1.6
PRKDC-202ENST00000338368 LINC00614P0C842 121 aa5.04□□□□□ -1.6
PRKDC-202ENST00000338368 RPL15P61313 204 aaKnown RBP5.04□□□□□ -1.6
PRKDC-202ENST00000338368 JOSD1Q15040 202 aaPredicted RBP5.04□□□□□ -1.6
PRKDC-202ENST00000338368 ATP5L2Q7Z4Y8 100 aa5.04□□□□□ -1.6
PRKDC-202ENST00000338368 LYPD1Q8N2G4 141 aa5.04□□□□□ -1.6
PRKDC-202ENST00000338368 PHLDA3Q9Y5J5 127 aa5.04□□□□□ -1.6
PRKDC-202ENST00000338368 TOMM40O96008 361 aa5.04□□□□□ -1.6
PRKDC-202ENST00000338368 HINT1P49773 126 aaPredicted RBP5.04□□□□□ -1.6
PRKDC-202ENST00000338368 PAX8Q06710 450 aa5.04□□□□□ -1.6
PRKDC-202ENST00000338368 ZNF114Q8NC26 417 aa5.04□□□□□ -1.6
PRKDC-202ENST00000338368 MAP1LC3AQ9H492 121 aa5.04□□□□□ -1.6
PRKDC-202ENST00000338368 H7C1H1 209 aa5.04□□□□□ -1.6
PRKDC-202ENST00000338368 CR1LQ2VPA4 569 aa5.04□□□□□ -1.6
PRKDC-202ENST00000338368 GOLT1BQ9Y3E0 138 aa5.04□□□□□ -1.6
PRKDC-202ENST00000338368 A0A1B0GUS0 222 aa5.04□□□□□ -1.6
PRKDC-202ENST00000338368 TMEM238LA0A1B0GVL6 79 aa5.04□□□□□ -1.6
PRKDC-202ENST00000338368 A6NJY4 79 aa5.04□□□□□ -1.6
PRKDC-202ENST00000338368 PMCHL2Q9BQD1 86 aa5.04□□□□□ -1.6
PRKDC-202ENST00000338368 REC114Q7Z4M0 266 aa5.04□□□□□ -1.6
PRKDC-202ENST00000338368 NDUFB8O95169 186 aa5.04□□□□□ -1.6
PRKDC-202ENST00000338368 IGKV3-20P01619 116 aa5.04□□□□□ -1.6
PRKDC-202ENST00000338368 SPANXDQ9BXN6 97 aa5.04□□□□□ -1.6
PRKDC-202ENST00000338368 UQCR10Q9UDW1 63 aa5.04□□□□□ -1.6
PRKDC-202ENST00000338368 PPIFP30405 207 aaKnown RBP5.04□□□□□ -1.6
PRKDC-202ENST00000338368 FBXL19-AS1Q494R0 122 aa5.04□□□□□ -1.6
PRKDC-202ENST00000338368 KCNS1Q96KK3 526 aa5.04□□□□□ -1.6
PRKDC-202ENST00000338368 IGKV2-40A0A087WW87 121 aaPredicted RBP5.04□□□□□ -1.6
PRKDC-202ENST00000338368 A0A1B0GW15 77 aa5.04□□□□□ -1.6
PRKDC-202ENST00000338368 GGTLC3B5MD39 225 aa5.04□□□□□ -1.6
PRKDC-202ENST00000338368 NDUFS6O75380 124 aaKnown RBP5.04□□□□□ -1.6
PRKDC-202ENST00000338368 IGKV2D-40P01614 121 aaPredicted RBP5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms