RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 CSMD2Q7Z408 3487 aa13.81□□□□□ -0.2
RAB39A-201ENST00000320578 CD5LO43866 347 aa13.8□□□□□ -0.2
RAB39A-201ENST00000320578 IGHG4P01861 327 aa13.8□□□□□ -0.2
RAB39A-201ENST00000320578 RAB5AP20339 215 aa13.8□□□□□ -0.2
RAB39A-201ENST00000320578 ARL6IP6Q8N6S5 226 aa13.8□□□□□ -0.2
RAB39A-201ENST00000320578 SMIM12Q96EX1 92 aa13.8□□□□□ -0.2
RAB39A-201ENST00000320578 IGF2BP2-AS1Q96M15 143 aa13.8□□□□□ -0.2
RAB39A-201ENST00000320578 GPR82Q96P67 336 aa13.8□□□□□ -0.2
RAB39A-201ENST00000320578 NPFFR1Q9GZQ6 430 aa13.8□□□□□ -0.2
RAB39A-201ENST00000320578 MAP1AP78559 2803 aaPredicted RBP13.8□□□□□ -0.2
RAB39A-201ENST00000320578 SLC25A5P05141 298 aaKnown RBP13.8□□□□□ -0.2
RAB39A-201ENST00000320578 CRYBA1P05813 215 aa13.8□□□□□ -0.2
RAB39A-201ENST00000320578 TMEM183BQ1AE95 376 aa13.8□□□□□ -0.2
RAB39A-201ENST00000320578 CENPWQ5EE01 88 aa13.8□□□□□ -0.2
RAB39A-201ENST00000320578 C1orf194Q5T5A4 169 aa13.8□□□□□ -0.2
RAB39A-201ENST00000320578 SFRP2Q96HF1 295 aa13.8□□□□□ -0.2
RAB39A-201ENST00000320578 ATG101Q9BSB4 218 aa13.8□□□□□ -0.2
RAB39A-201ENST00000320578 TRBV24-1A0A075B6N3 115 aa13.79□□□□□ -0.2
RAB39A-201ENST00000320578 HOXA3O43365 443 aaPredicted RBP13.79□□□□□ -0.2
RAB39A-201ENST00000320578 ZNF253O75346 499 aa13.79□□□□□ -0.2
RAB39A-201ENST00000320578 PFN1P07737 140 aaKnown RBP13.79□□□□□ -0.2
RAB39A-201ENST00000320578 ATF4P18848 351 aaPredicted RBP13.79□□□□□ -0.2
RAB39A-201ENST00000320578 SRP14P37108 136 aaKnown RBP13.79□□□□□ -0.2
RAB39A-201ENST00000320578 TEX38Q6PEX7 206 aa13.79□□□□□ -0.2
RAB39A-201ENST00000320578 OR5B12Q96R08 314 aa13.79□□□□□ -0.2
RAB39A-201ENST00000320578 SMAD7O15105 426 aaKnown RBP13.78□□□□□ -0.2
RAB39A-201ENST00000320578 GCGP01275 180 aa13.78□□□□□ -0.2
RAB39A-201ENST00000320578 PF4V1P10720 104 aa13.78□□□□□ -0.2
RAB39A-201ENST00000320578 Q8N2B8 174 aa13.78□□□□□ -0.2
RAB39A-201ENST00000320578 PYGO2Q9BRQ0 406 aa13.78□□□□□ -0.2
RAB39A-201ENST00000320578 GNB4Q9HAV0 340 aa13.78□□□□□ -0.2
RAB39A-201ENST00000320578 U3KQE9 123 aa13.78□□□□□ -0.2
RAB39A-201ENST00000320578 SVEP1Q4LDE5 3571 aa13.78□□□□□ -0.2
RAB39A-201ENST00000320578 TRBV6-1A0A0K0K1D8 114 aa13.78□□□□□ -0.2
RAB39A-201ENST00000320578 CLPSL1A2RUU4 121 aa13.78□□□□□ -0.2
RAB39A-201ENST00000320578 TCRAP04437 139 aa13.78□□□□□ -0.2
RAB39A-201ENST00000320578 S100PP25815 95 aa13.78□□□□□ -0.2
RAB39A-201ENST00000320578 PSMB8P28062 276 aa13.78□□□□□ -0.2
RAB39A-201ENST00000320578 ARL3P36405 182 aa13.78□□□□□ -0.2
RAB39A-201ENST00000320578 KRTAP1-1Q07627 177 aa13.78□□□□□ -0.2
RAB39A-201ENST00000320578 SIGLEC15Q6ZMC9 328 aa13.78□□□□□ -0.2
RAB39A-201ENST00000320578 C1QL4Q86Z23 238 aa13.78□□□□□ -0.2
RAB39A-201ENST00000320578 PGPEP1LA6NFU8 196 aa13.77□□□□□ -0.21
RAB39A-201ENST00000320578 K7EN84 100 aa13.77□□□□□ -0.21
RAB39A-201ENST00000320578 NDUFA4O00483 81 aa13.77□□□□□ -0.21
RAB39A-201ENST00000320578 BUB3O43684 328 aa13.77□□□□□ -0.21
RAB39A-201ENST00000320578 IGLV2-8P01709 118 aa13.77□□□□□ -0.21
RAB39A-201ENST00000320578 PSG9Q00887 426 aa13.77□□□□□ -0.21
RAB39A-201ENST00000320578 OR10G8Q8NGN5 311 aa13.77□□□□□ -0.21
RAB39A-201ENST00000320578 FMC1Q96HJ9 113 aa13.77□□□□□ -0.21
RAB39A-201ENST00000320578 METTL26Q96S19 204 aa13.77□□□□□ -0.21
RAB39A-201ENST00000320578 KLK15Q9H2R5 256 aa13.77□□□□□ -0.21
RAB39A-201ENST00000320578 GALR1P47211 349 aa13.76□□□□□ -0.21
RAB39A-201ENST00000320578 OR8I2Q8N0Y5 310 aa13.76□□□□□ -0.21
RAB39A-201ENST00000320578 CMTM2Q8TAZ6 248 aa13.76□□□□□ -0.21
RAB39A-201ENST00000320578 BTF3L4Q96K17 158 aa13.76□□□□□ -0.21
RAB39A-201ENST00000320578 ZNF702PQ9H963 129 aa13.76□□□□□ -0.21
RAB39A-201ENST00000320578 OSTCQ9NRP0 149 aa13.76□□□□□ -0.21
RAB39A-201ENST00000320578 PDZD2O15018 2839 aa13.76□□□□□ -0.21
RAB39A-201ENST00000320578 A0A087X0K7 114 aa13.76□□□□□ -0.21
RAB39A-201ENST00000320578 FLI1Q01543 452 aaPredicted RBP13.76□□□□□ -0.21
RAB39A-201ENST00000320578 FOXL1Q12952 345 aa13.76□□□□□ -0.21
RAB39A-201ENST00000320578 SIGLECL1Q8N7X8 197 aa13.76□□□□□ -0.21
RAB39A-201ENST00000320578 URGCP-MRPS24S4R325 110 aa13.76□□□□□ -0.21
RAB39A-201ENST00000320578 ISLRO14498 428 aa13.75□□□□□ -0.21
RAB39A-201ENST00000320578 SNRPCP09234 159 aaKnown RBP13.75□□□□□ -0.21
RAB39A-201ENST00000320578 MEOX2P50222 304 aa13.75□□□□□ -0.21
RAB39A-201ENST00000320578 UBE2G1P62253 170 aa13.75□□□□□ -0.21
RAB39A-201ENST00000320578 SLC35B1P78383 322 aa13.75□□□□□ -0.21
RAB39A-201ENST00000320578 KCNIP4Q6PIL6 250 aa13.75□□□□□ -0.21
RAB39A-201ENST00000320578 BAGE2Q86Y30 109 aa13.75□□□□□ -0.21
RAB39A-201ENST00000320578 OR4X2Q8NGF9 303 aa13.75□□□□□ -0.21
RAB39A-201ENST00000320578 AURKAIP1Q9NWT8 199 aaPredicted RBP13.75□□□□□ -0.21
RAB39A-201ENST00000320578 MLXQ9UH92 298 aa13.75□□□□□ -0.21
RAB39A-201ENST00000320578 UNC79Q9P2D8 2635 aa13.74□□□□□ -0.21
RAB39A-201ENST00000320578 SERTM2A0A1B0GWG4 89 aa13.74□□□□□ -0.21
RAB39A-201ENST00000320578 C1orf196B1AJZ1 125 aa13.74□□□□□ -0.21
RAB39A-201ENST00000320578 PPP5D1E7EU14 171 aa13.74□□□□□ -0.21
RAB39A-201ENST00000320578 GGCTO75223 188 aaKnown RBP13.74□□□□□ -0.21
RAB39A-201ENST00000320578 ELANEP08246 267 aa13.74□□□□□ -0.21
RAB39A-201ENST00000320578 CXCL1P09341 107 aa13.74□□□□□ -0.21
RAB39A-201ENST00000320578 GNG5P63218 68 aa13.74□□□□□ -0.21
RAB39A-201ENST00000320578 FOXE3Q13461 319 aa13.74□□□□□ -0.21
RAB39A-201ENST00000320578 FAM210BQ96KR6 192 aa13.74□□□□□ -0.21
RAB39A-201ENST00000320578 TMEM160Q9NX00 188 aa13.74□□□□□ -0.21
RAB39A-201ENST00000320578 TGIF2-C20orf24A0A0A6YYL0 155 aa13.74□□□□□ -0.21
RAB39A-201ENST00000320578 H3BTX0 84 aa13.74□□□□□ -0.21
RAB39A-201ENST00000320578 FAM231DQ6ZW35 169 aa13.74□□□□□ -0.21
RAB39A-201ENST00000320578 RNF152Q8N8N0 203 aa13.74□□□□□ -0.21
RAB39A-201ENST00000320578 LINC00479Q96M42 142 aa13.74□□□□□ -0.21
RAB39A-201ENST00000320578 C17orf77Q96MU5 243 aa13.74□□□□□ -0.21
RAB39A-201ENST00000320578 AAMDCQ9H7C9 122 aa13.74□□□□□ -0.21
RAB39A-201ENST00000320578 SMAD5-AS1Q9Y6J3 95 aa13.74□□□□□ -0.21
RAB39A-201ENST00000320578 ZANQ9Y493 2812 aa13.73□□□□□ -0.21
RAB39A-201ENST00000320578 NBPF19A0A087WUL8 3843 aa13.73□□□□□ -0.21
RAB39A-201ENST00000320578 ITPR3Q14573 2671 aa13.73□□□□□ -0.21
RAB39A-201ENST00000320578 TRAV9-1A0A075B6T8 112 aa13.73□□□□□ -0.21
RAB39A-201ENST00000320578 IGHV3-35A0A0C4DH35 117 aa13.73□□□□□ -0.21
RAB39A-201ENST00000320578 RAB5BP61020 215 aa13.73□□□□□ -0.21
RAB39A-201ENST00000320578 EXOC3-AS1Q8N2X6 119 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 143.9 ms