RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 HGFACQ04756 655 aa11.69□□□□□ -0.54
CUX2-201ENST00000261726 PSG3Q16557 428 aa11.69□□□□□ -0.54
CUX2-201ENST00000261726 MESP1Q9BRJ9 268 aa11.69□□□□□ -0.54
CUX2-201ENST00000261726 OVOL2Q9BRP0 275 aa11.69□□□□□ -0.54
CUX2-201ENST00000261726 TNFSF13O75888 250 aa11.69□□□□□ -0.54
CUX2-201ENST00000261726 PAQR4Q8N4S7 273 aaPredicted RBP11.69□□□□□ -0.54
CUX2-201ENST00000261726 AMBPP02760 352 aa11.68□□□□□ -0.54
CUX2-201ENST00000261726 LINC00477Q96M19 166 aa11.68□□□□□ -0.54
CUX2-201ENST00000261726 SRCAPQ6ZRS2 3230 aa11.68□□□□□ -0.54
CUX2-201ENST00000261726 B4DSR2 109 aa11.68□□□□□ -0.54
CUX2-201ENST00000261726 TMEM178BH3BS89 294 aa11.68□□□□□ -0.54
CUX2-201ENST00000261726 CLPSP04118 112 aa11.68□□□□□ -0.54
CUX2-201ENST00000261726 ZNF561-AS1K7EIQ3 104 aa11.68□□□□□ -0.54
CUX2-201ENST00000261726 UBE2CO00762 179 aa11.68□□□□□ -0.54
CUX2-201ENST00000261726 C9orf139Q6ZV77 190 aa11.68□□□□□ -0.54
CUX2-201ENST00000261726 HIST3H2BBQ8N257 126 aa11.68□□□□□ -0.54
CUX2-201ENST00000261726 C9JAW5 83 aa11.68□□□□□ -0.54
CUX2-201ENST00000261726 CD177Q8N6Q3 437 aa11.68□□□□□ -0.54
CUX2-201ENST00000261726 IGHV3-16A0A0C4DH30 117 aa11.68□□□□□ -0.54
CUX2-201ENST00000261726 KNCNA6PVL3 124 aa11.68□□□□□ -0.54
CUX2-201ENST00000261726 IGKV1-12A0A0C4DH73 117 aa11.67□□□□□ -0.54
CUX2-201ENST00000261726 IGKV1D-12P01611 117 aa11.67□□□□□ -0.54
CUX2-201ENST00000261726 AGMATQ9BSE5 352 aa11.67□□□□□ -0.54
CUX2-201ENST00000261726 C1QTNF4Q9BXJ3 329 aa11.67□□□□□ -0.54
CUX2-201ENST00000261726 RFNGQ9Y644 331 aa11.67□□□□□ -0.54
CUX2-201ENST00000261726 RPRMLQ8N4K4 120 aa11.67□□□□□ -0.54
CUX2-201ENST00000261726 THSD7BQ9C0I4 1608 aa11.67□□□□□ -0.54
CUX2-201ENST00000261726 SYNJ2BPP57105 145 aa11.67□□□□□ -0.54
CUX2-201ENST00000261726 F5H768 121 aa11.67□□□□□ -0.54
CUX2-201ENST00000261726 TRGV9Q99603 122 aa11.67□□□□□ -0.54
CUX2-201ENST00000261726 RNF166Q96A37 237 aaPredicted RBP11.67□□□□□ -0.54
CUX2-201ENST00000261726 RHPN1-AS1Q9BWJ2 59 aa11.67□□□□□ -0.54
CUX2-201ENST00000261726 KIR3DS1Q14943 382 aa11.66□□□□□ -0.54
CUX2-201ENST00000261726 MRAPQ8TCY5 172 aa11.66□□□□□ -0.54
CUX2-201ENST00000261726 TRAV25A0A0B4J276 109 aa11.66□□□□□ -0.54
CUX2-201ENST00000261726 DKK1O94907 266 aa11.66□□□□□ -0.54
CUX2-201ENST00000261726 C5orf24Q7Z6I8 188 aa11.66□□□□□ -0.54
CUX2-201ENST00000261726 CABIN1Q9Y6J0 2220 aa11.66□□□□□ -0.54
CUX2-201ENST00000261726 CD5P06127 495 aa11.66□□□□□ -0.54
CUX2-201ENST00000261726 MINOS1Q5TGZ0 78 aa11.66□□□□□ -0.54
CUX2-201ENST00000261726 AMN1Q8IY45 258 aa11.66□□□□□ -0.54
CUX2-201ENST00000261726 MINOS1-NBL1R4GNA1 71 aa11.66□□□□□ -0.54
CUX2-201ENST00000261726 H0YJW9 148 aa11.66□□□□□ -0.54
CUX2-201ENST00000261726 LY6HO94772 140 aa11.66□□□□□ -0.54
CUX2-201ENST00000261726 PFN2P35080 140 aa11.66□□□□□ -0.54
CUX2-201ENST00000261726 GAGE12JA6NER3 117 aa11.66□□□□□ -0.54
CUX2-201ENST00000261726 BUB1B-PAK6H3BSN5 160 aa11.66□□□□□ -0.54
CUX2-201ENST00000261726 GAGE1Q13065 139 aa11.66□□□□□ -0.54
CUX2-201ENST00000261726 GAGE4Q13068 117 aa11.66□□□□□ -0.54
CUX2-201ENST00000261726 GAGE5Q13069 117 aa11.66□□□□□ -0.54
CUX2-201ENST00000261726 PMVKQ15126 192 aa11.66□□□□□ -0.54
CUX2-201ENST00000261726 C5orf64Q2M2E5 130 aa11.66□□□□□ -0.54
CUX2-201ENST00000261726 LINC01559Q495D7 138 aa11.66□□□□□ -0.54
CUX2-201ENST00000261726 NKAPP1Q8N9T2 125 aa11.66□□□□□ -0.54
CUX2-201ENST00000261726 PSPNO60542 156 aa11.65□□□□□ -0.54
CUX2-201ENST00000261726 DEFB131AP59861 70 aa11.65□□□□□ -0.54
CUX2-201ENST00000261726 TMEM256Q8N2U0 113 aa11.65□□□□□ -0.54
CUX2-201ENST00000261726 GLRX5Q86SX6 157 aa11.65□□□□□ -0.54
CUX2-201ENST00000261726 ATRXP46100 2492 aa11.65□□□□□ -0.54
CUX2-201ENST00000261726 MPV17L2Q567V2 206 aa11.65□□□□□ -0.55
CUX2-201ENST00000261726 RASL11AQ6T310 242 aa11.65□□□□□ -0.55
CUX2-201ENST00000261726 LY6G5BQ8NDX9 201 aa11.65□□□□□ -0.55
CUX2-201ENST00000261726 LINC00205P59089 165 aa11.64□□□□□ -0.55
CUX2-201ENST00000261726 MAJINQ3KP22 176 aa11.64□□□□□ -0.55
CUX2-201ENST00000261726 XCL2Q9UBD3 114 aa11.64□□□□□ -0.55
CUX2-201ENST00000261726 SRRM5B3KS81 715 aa11.64□□□□□ -0.55
CUX2-201ENST00000261726 ZC2HC1BQ5TFG8 222 aa11.64□□□□□ -0.55
CUX2-201ENST00000261726 LIME1Q9H400 295 aa11.64□□□□□ -0.55
CUX2-201ENST00000261726 FAM223BA6NKX1 122 aa11.64□□□□□ -0.55
CUX2-201ENST00000261726 LINC01551Q86U37 167 aa11.64□□□□□ -0.55
CUX2-201ENST00000261726 FAM223AQ8IWN6 122 aa11.64□□□□□ -0.55
CUX2-201ENST00000261726 NYNRINQ9P2P1 1898 aaKnown RBP11.64□□□□□ -0.55
CUX2-201ENST00000261726 IGKV1-27A0A075B6S5 117 aa11.64□□□□□ -0.55
CUX2-201ENST00000261726 SPINK8P0C7L1 97 aa11.64□□□□□ -0.55
CUX2-201ENST00000261726 RUSC1-AS1Q66K80 236 aa11.64□□□□□ -0.55
CUX2-201ENST00000261726 RNF114Q9Y508 228 aa11.64□□□□□ -0.55
CUX2-201ENST00000261726 OVOL3O00110 214 aa11.63□□□□□ -0.55
CUX2-201ENST00000261726 ZNF124Q15973 351 aa11.63□□□□□ -0.55
CUX2-201ENST00000261726 Q71RC1 249 aaPredicted RBP11.63□□□□□ -0.55
CUX2-201ENST00000261726 USMG5Q96IX5 58 aa11.63□□□□□ -0.55
CUX2-201ENST00000261726 IGLV3-12A0A075B6K2 115 aa11.63□□□□□ -0.55
CUX2-201ENST00000261726 A0A0G2JNJ9 132 aa11.63□□□□□ -0.55
CUX2-201ENST00000261726 VWCEQ96DN2 955 aa11.63□□□□□ -0.55
CUX2-201ENST00000261726 CHAC1Q9BUX1 264 aa11.63□□□□□ -0.55
CUX2-201ENST00000261726 Q9UFV3 132 aa11.63□□□□□ -0.55
CUX2-201ENST00000261726 GATA4P43694 442 aa11.63□□□□□ -0.55
CUX2-201ENST00000261726 DAD1P61803 113 aa11.63□□□□□ -0.55
CUX2-201ENST00000261726 C20orf204Q6ZNR8 217 aa11.63□□□□□ -0.55
CUX2-201ENST00000261726 MAPK1IP1LQ8NDC0 245 aa11.63□□□□□ -0.55
CUX2-201ENST00000261726 GFI1Q99684 422 aa11.63□□□□□ -0.55
CUX2-201ENST00000261726 SYS1-DBNDD2H3BUS1 97 aa11.63□□□□□ -0.55
CUX2-201ENST00000261726 FGF16O43320 207 aa11.63□□□□□ -0.55
CUX2-201ENST00000261726 C3orf79P0CE67 100 aa11.63□□□□□ -0.55
CUX2-201ENST00000261726 CRYGSP22914 178 aa11.63□□□□□ -0.55
CUX2-201ENST00000261726 TCF15Q12870 199 aa11.63□□□□□ -0.55
CUX2-201ENST00000261726 GAFA1Q96PS6 74 aa11.63□□□□□ -0.55
CUX2-201ENST00000261726 KLK9Q9UKQ9 250 aa11.63□□□□□ -0.55
CUX2-201ENST00000261726 CSRP1P21291 193 aaKnown RBP11.62□□□□□ -0.55
CUX2-201ENST00000261726 MPZP25189 248 aa11.62□□□□□ -0.55
CUX2-201ENST00000261726 ADAMTSL5Q6ZMM2 481 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms