RNA–Protein interactions for RNA: ENST00000234256.3

SLC1A4-201, Transcript of solute carrier family 1 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC1A4, Length 4,561 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A4-201ENST00000234256 RAX2Q96IS3 184 aa13.95□□□□□ -0.18
SLC1A4-201ENST00000234256 GEMIN7Q9H840 131 aaKnown RBP13.95□□□□□ -0.18
SLC1A4-201ENST00000234256 A0A0G2JLM5 398 aa13.95□□□□□ -0.18
SLC1A4-201ENST00000234256 NAV2Q8IVL1 2488 aa13.94□□□□□ -0.18
SLC1A4-201ENST00000234256 HAPLN4Q86UW8 402 aa13.94□□□□□ -0.18
SLC1A4-201ENST00000234256 C11orf44Q8N8P7 122 aa13.94□□□□□ -0.18
SLC1A4-201ENST00000234256 MMP23AO75900 390 aa13.94□□□□□ -0.18
SLC1A4-201ENST00000234256 JMJD8Q96S16 334 aa13.94□□□□□ -0.18
SLC1A4-201ENST00000234256 TNFSF13O75888 250 aa13.94□□□□□ -0.18
SLC1A4-201ENST00000234256 LMO1P25800 156 aa13.94□□□□□ -0.18
SLC1A4-201ENST00000234256 A0A1W2PPI3 338 aa13.93□□□□□ -0.18
SLC1A4-201ENST00000234256 ACTL10Q5JWF8 245 aa13.93□□□□□ -0.18
SLC1A4-201ENST00000234256 ASPHD1Q5U4P2 390 aa13.93□□□□□ -0.18
SLC1A4-201ENST00000234256 BRD3OSQ6XYD6 125 aa13.93□□□□□ -0.18
SLC1A4-201ENST00000234256 COX6CP09669 75 aa13.93□□□□□ -0.18
SLC1A4-201ENST00000234256 LSM4Q9Y4Z0 139 aaKnown RBP13.93□□□□□ -0.18
SLC1A4-201ENST00000234256 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.93□□□□□ -0.18
SLC1A4-201ENST00000234256 ITLN2Q8WWU7 325 aaPredicted RBP13.93□□□□□ -0.18
SLC1A4-201ENST00000234256 CD7P09564 240 aa13.93□□□□□ -0.18
SLC1A4-201ENST00000234256 OR10J3Q5JRS4 329 aa13.93□□□□□ -0.18
SLC1A4-201ENST00000234256 TNFRSF14Q92956 283 aa13.93□□□□□ -0.18
SLC1A4-201ENST00000234256 IGLV3-1P01715 115 aa13.92□□□□□ -0.18
SLC1A4-201ENST00000234256 HBDP02042 147 aa13.92□□□□□ -0.18
SLC1A4-201ENST00000234256 ERVK11-1P61568 191 aa13.92□□□□□ -0.18
SLC1A4-201ENST00000234256 NDPQ00604 133 aa13.92□□□□□ -0.18
SLC1A4-201ENST00000234256 hDV102S1A0JD36 115 aa13.92□□□□□ -0.18
SLC1A4-201ENST00000234256 ZNF114Q8NC26 417 aa13.92□□□□□ -0.18
SLC1A4-201ENST00000234256 NHP2Q9NX24 153 aaKnown RBP13.92□□□□□ -0.18
SLC1A4-201ENST00000234256 ZNF134P52741 427 aa13.92□□□□□ -0.18
SLC1A4-201ENST00000234256 C1orf194Q5T5A4 169 aa13.92□□□□□ -0.18
SLC1A4-201ENST00000234256 IFI27L1Q96BM0 104 aa13.92□□□□□ -0.18
SLC1A4-201ENST00000234256 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.91□□□□□ -0.18
SLC1A4-201ENST00000234256 VMO1Q7Z5L0 202 aa13.91□□□□□ -0.18
SLC1A4-201ENST00000234256 MRPL16Q9NX20 251 aaKnown RBP13.91□□□□□ -0.18
SLC1A4-201ENST00000234256 OR5AN1Q8NGI8 311 aa13.91□□□□□ -0.18
SLC1A4-201ENST00000234256 FNDC4Q9H6D8 234 aaPredicted RBP13.91□□□□□ -0.18
SLC1A4-201ENST00000234256 SPCS1Q9Y6A9 102 aa13.91□□□□□ -0.18
SLC1A4-201ENST00000234256 A0A1B0GW15 77 aa13.91□□□□□ -0.18
SLC1A4-201ENST00000234256 D6R8Y8 96 aa13.91□□□□□ -0.18
SLC1A4-201ENST00000234256 E7EQL1 145 aa13.91□□□□□ -0.18
SLC1A4-201ENST00000234256 SUMO2P61956 95 aaKnown RBP13.91□□□□□ -0.18
SLC1A4-201ENST00000234256 LYZL1Q6UWQ5 148 aa13.91□□□□□ -0.18
SLC1A4-201ENST00000234256 C5orf64Q2M2E5 130 aa13.91□□□□□ -0.18
SLC1A4-201ENST00000234256 MEIG1Q5JSS6 88 aa13.91□□□□□ -0.18
SLC1A4-201ENST00000234256 ZNF418Q8TF45 676 aaPredicted RBP13.91□□□□□ -0.18
SLC1A4-201ENST00000234256 TPTE2P1Q5T6R2 138 aa13.9□□□□□ -0.18
SLC1A4-201ENST00000234256 A0A1W2PRX2 142 aa13.9□□□□□ -0.18
SLC1A4-201ENST00000234256 BUB1B-PAK6H3BSN5 160 aa13.9□□□□□ -0.18
SLC1A4-201ENST00000234256 CNTFRP26992 372 aa13.9□□□□□ -0.18
SLC1A4-201ENST00000234256 TRGV9Q99603 122 aa13.9□□□□□ -0.18
SLC1A4-201ENST00000234256 SLC50A1Q9BRV3 221 aa13.9□□□□□ -0.19
SLC1A4-201ENST00000234256 TNFRSF18Q9Y5U5 241 aa13.89□□□□□ -0.19
SLC1A4-201ENST00000234256 CHD3Q12873 2000 aaKnown RBP13.89□□□□□ -0.19
SLC1A4-201ENST00000234256 A0A1B0GWB2 263 aa13.88□□□□□ -0.19
SLC1A4-201ENST00000234256 UBE2L6O14933 153 aa13.88□□□□□ -0.19
SLC1A4-201ENST00000234256 PAX8Q06710 450 aa13.88□□□□□ -0.19
SLC1A4-201ENST00000234256 FGF23Q9GZV9 251 aaPredicted RBP13.88□□□□□ -0.19
SLC1A4-201ENST00000234256 EML6Q6ZMW3 1958 aa13.88□□□□□ -0.19
SLC1A4-201ENST00000234256 FAM181BA6NEQ2 426 aa13.88□□□□□ -0.19
SLC1A4-201ENST00000234256 SMKR1H3BMG3 65 aa13.88□□□□□ -0.19
SLC1A4-201ENST00000234256 VDAC2P45880 294 aaPredicted RBP13.88□□□□□ -0.19
SLC1A4-201ENST00000234256 DUX3Q96PT4 197 aa13.88□□□□□ -0.19
SLC1A4-201ENST00000234256 ALKBH7Q9BT30 221 aaPredicted RBP13.88□□□□□ -0.19
SLC1A4-201ENST00000234256 IGKV3D-20A0A0C4DH25 116 aa13.87□□□□□ -0.19
SLC1A4-201ENST00000234256 TMEM14BQ9NUH8 114 aa13.87□□□□□ -0.19
SLC1A4-201ENST00000234256 ZNF329Q86UD4 541 aa13.87□□□□□ -0.19
SLC1A4-201ENST00000234256 DIAPH2-AS1Q14236 149 aa13.87□□□□□ -0.19
SLC1A4-201ENST00000234256 ATP5L2Q7Z4Y8 100 aa13.87□□□□□ -0.19
SLC1A4-201ENST00000234256 LYPD6Q86Y78 171 aa13.86□□□□□ -0.19
SLC1A4-201ENST00000234256 MRAP2Q96G30 205 aa13.86□□□□□ -0.19
SLC1A4-201ENST00000234256 LDLRAD2Q5SZI1 272 aa13.86□□□□□ -0.19
SLC1A4-201ENST00000234256 AMN1Q8IY45 258 aa13.86□□□□□ -0.19
SLC1A4-201ENST00000234256 PLXNB3Q9ULL4 1909 aa13.86□□□□□ -0.19
SLC1A4-201ENST00000234256 USP9YO00507 2555 aaPredicted RBP13.86□□□□□ -0.19
SLC1A4-201ENST00000234256 USP9XQ93008 2570 aaPredicted RBP13.86□□□□□ -0.19
SLC1A4-201ENST00000234256 MPV17L2Q567V2 206 aa13.86□□□□□ -0.19
SLC1A4-201ENST00000234256 MEGF9Q9H1U4 602 aa13.86□□□□□ -0.19
SLC1A4-201ENST00000234256 GGTLC3B5MD39 225 aa13.86□□□□□ -0.19
SLC1A4-201ENST00000234256 TPSG1Q9NRR2 321 aa13.86□□□□□ -0.19
SLC1A4-201ENST00000234256 RNASE1P07998 156 aaKnown RBP13.85□□□□□ -0.19
SLC1A4-201ENST00000234256 ZNF124Q15973 351 aa13.85□□□□□ -0.19
SLC1A4-201ENST00000234256 C17orf58Q2M2W7 97 aa13.85□□□□□ -0.19
SLC1A4-201ENST00000234256 PAPPA-AS1Q5QFB9 102 aa13.85□□□□□ -0.19
SLC1A4-201ENST00000234256 DTX1Q86Y01 620 aa13.85□□□□□ -0.19
SLC1A4-201ENST00000234256 MED12LQ86YW9 2145 aa13.85□□□□□ -0.19
SLC1A4-201ENST00000234256 A0A087X0K7 114 aa13.85□□□□□ -0.19
SLC1A4-201ENST00000234256 EREGO14944 169 aa13.85□□□□□ -0.19
SLC1A4-201ENST00000234256 EMP1P54849 157 aa13.85□□□□□ -0.19
SLC1A4-201ENST00000234256 NXT2Q9NPJ8 142 aaKnown RBP13.85□□□□□ -0.19
SLC1A4-201ENST00000234256 WT1-ASQ06250 92 aa13.85□□□□□ -0.19
SLC1A4-201ENST00000234256 C10orf91Q5T1B1 145 aa13.85□□□□□ -0.19
SLC1A4-201ENST00000234256 NUP37Q8NFH4 326 aa13.85□□□□□ -0.19
SLC1A4-201ENST00000234256 NPFFR1Q9GZQ6 430 aa13.85□□□□□ -0.19
SLC1A4-201ENST00000234256 TRAV41A0A0B4J266 112 aa13.85□□□□□ -0.19
SLC1A4-201ENST00000234256 TRAV21A0A0B4J279 112 aa13.85□□□□□ -0.19
SLC1A4-201ENST00000234256 SRRM4A7MD48 611 aaKnown RBP13.85□□□□□ -0.19
SLC1A4-201ENST00000234256 PPP1R17O96001 155 aa13.85□□□□□ -0.19
SLC1A4-201ENST00000234256 PPBPP02775 128 aa13.84□□□□□ -0.19
SLC1A4-201ENST00000234256 ARMS2P0C7Q2 107 aa13.84□□□□□ -0.19
SLC1A4-201ENST00000234256 ZNF688P0C7X2 276 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms