RNA–Protein interactions for RNA: YPL104W

MSD1, Transcript of Mitochondrial aspartyl-tRNA synthetase, yeastyeast

Gene MSD1, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSD1YPL104W SRF1Q12516 437 aa3.8□□□□□ -1.8
MSD1YPL104W ATG11Q12527 1178 aa3.8□□□□□ -1.8
MSD1YPL104W YBL111CQ3E7Y5 667 aa3.8□□□□□ -1.8
MSD1YPL104W YKL068W-AQ3E826 78 aa3.8□□□□□ -1.8
MSD1YPL104W ASP3-2P0CX77 362 aa3.8□□□□□ -1.8
MSD1YPL104W ASP3-3P0CX78 362 aa3.8□□□□□ -1.8
MSD1YPL104W ASP3-4P0CX79 362 aa3.8□□□□□ -1.8
MSD1YPL104W ASP3-1P0CZ17 362 aa3.8□□□□□ -1.8
MSD1YPL104W RPL4AP10664 362 aaKnown RBP3.8□□□□□ -1.8
MSD1YPL104W HEM13P11353 328 aaKnown RBP3.8□□□□□ -1.8
MSD1YPL104W RRT12P25381 491 aa3.8□□□□□ -1.8
MSD1YPL104W MSS51P32335 436 aa3.8□□□□□ -1.8
MSD1YPL104W RRT2P38332 387 aa3.8□□□□□ -1.8
MSD1YPL104W LCP5P40079 357 aaPredicted RBP3.8□□□□□ -1.8
MSD1YPL104W YJR120WP47157 116 aa3.8□□□□□ -1.8
MSD1YPL104W RPL4BP49626 362 aaKnown RBP3.8□□□□□ -1.8
MSD1YPL104W HXT15P54854 567 aa3.8□□□□□ -1.8
MSD1YPL104W ATG16Q03818 150 aa3.8□□□□□ -1.8
MSD1YPL104W ERV41Q04651 352 aa3.8□□□□□ -1.8
MSD1YPL104W AIM41Q12032 185 aa3.8□□□□□ -1.8
MSD1YPL104W YER152CP10356 443 aa3.79□□□□□ -1.8
MSD1YPL104W INO1P11986 533 aa3.79□□□□□ -1.8
MSD1YPL104W BCS1P32839 456 aa3.79□□□□□ -1.8
MSD1YPL104W UBC6P33296 250 aaPredicted RBP3.79□□□□□ -1.8
MSD1YPL104W PEX6P33760 1030 aa3.79□□□□□ -1.8
MSD1YPL104W AHP1P38013 176 aaKnown RBP3.79□□□□□ -1.8
MSD1YPL104W SPP381P38282 291 aaPredicted RBP3.79□□□□□ -1.8
MSD1YPL104W SAK1P38990 1142 aa3.79□□□□□ -1.8
MSD1YPL104W KAP123P40069 1113 aaKnown RBP3.79□□□□□ -1.8
MSD1YPL104W SKP2P42843 763 aa3.79□□□□□ -1.8
MSD1YPL104W SAD1P43589 448 aa3.79□□□□□ -1.8
MSD1YPL104W RIM8P53179 542 aa3.79□□□□□ -1.8
MSD1YPL104W BRE5P53741 515 aaKnown RBP3.79□□□□□ -1.8
MSD1YPL104W DAK1P54838 584 aaKnown RBP3.79□□□□□ -1.8
MSD1YPL104W RNT1Q02555 471 aa3.79□□□□□ -1.8
MSD1YPL104W YMR187CQ03236 431 aa3.79□□□□□ -1.8
MSD1YPL104W CWC21Q03375 135 aaKnown RBP3.79□□□□□ -1.8
MSD1YPL104W TDA9Q04545 1251 aa3.79□□□□□ -1.8
MSD1YPL104W YLR455WQ06188 304 aa3.79□□□□□ -1.8
MSD1YPL104W PUF3Q07807 879 aaKnown RBP RIP-Chip data3.79□□□□□ -1.8 RIP-Chip
MSD1YPL104W SGT2Q12118 346 aaKnown RBP3.79□□□□□ -1.8
MSD1YPL104W AIR2Q12476 344 aaKnown RBP3.79□□□□□ -1.8
MSD1YPL104W COX4P04037 155 aa3.78□□□□□ -1.8
MSD1YPL104W GAL10P04397 699 aa3.78□□□□□ -1.8
MSD1YPL104W RAD1P06777 1100 aa3.78□□□□□ -1.8
MSD1YPL104W GLN3P18494 730 aa3.78□□□□□ -1.8
MSD1YPL104W VMA4P22203 233 aaKnown RBP3.78□□□□□ -1.8
MSD1YPL104W ECM32P32644 1121 aaKnown RBP3.78□□□□□ -1.8
MSD1YPL104W SEG2P34250 1132 aa3.78□□□□□ -1.8
MSD1YPL104W MUD2P36084 527 aaKnown RBP3.78□□□□□ -1.8
MSD1YPL104W TIF5P38431 405 aaKnown RBP3.78□□□□□ -1.8
MSD1YPL104W RIM11P38615 370 aa3.78□□□□□ -1.8
MSD1YPL104W MMS21P38632 267 aa3.78□□□□□ -1.8
MSD1YPL104W YHR054CP38780 354 aa3.78□□□□□ -1.8
MSD1YPL104W GEM1P39722 662 aa3.78□□□□□ -1.8
MSD1YPL104W SAH1P39954 449 aaKnown RBP3.78□□□□□ -1.8
MSD1YPL104W AIM21P40563 679 aa3.78□□□□□ -1.8
MSD1YPL104W SIW14P53965 281 aa3.78□□□□□ -1.8
MSD1YPL104W MTG1Q03151 367 aaPredicted RBP3.78□□□□□ -1.8
MSD1YPL104W UGO1Q03327 502 aa3.78□□□□□ -1.8
MSD1YPL104W GYL1Q04322 720 aa3.78□□□□□ -1.8
MSD1YPL104W UFO1Q04511 668 aa3.78□□□□□ -1.8
MSD1YPL104W PUS1Q12211 544 aaKnown RBP3.78□□□□□ -1.8
MSD1YPL104W CMR1Q12510 522 aaKnown RBP3.78□□□□□ -1.8
MSD1YPL104W RTP1Q12751 981 aa3.78□□□□□ -1.8
MSD1YPL104W ADE3P07245 946 aaKnown RBP3.78□□□□□ -1.8
MSD1YPL104W PMS1P14242 873 aa3.78□□□□□ -1.8
MSD1YPL104W PRP9P19736 530 aaKnown RBP3.78□□□□□ -1.8
MSD1YPL104W ADE2P21264 571 aaKnown RBP3.78□□□□□ -1.8
MSD1YPL104W NPR1P22211 790 aa3.78□□□□□ -1.8
MSD1YPL104W CHL1P22516 861 aaPredicted RBP3.78□□□□□ -1.8
MSD1YPL104W CAP1P28495 268 aaKnown RBP3.78□□□□□ -1.8
MSD1YPL104W GYP6P32806 458 aa3.78□□□□□ -1.8
MSD1YPL104W YBL055CP34220 418 aaPredicted RBP3.78□□□□□ -1.8
MSD1YPL104W LAS1P36146 502 aaPredicted RBP3.78□□□□□ -1.8
MSD1YPL104W CBR1P38626 284 aaKnown RBP3.78□□□□□ -1.8
MSD1YPL104W END3P39013 349 aa3.78□□□□□ -1.8
MSD1YPL104W MBP1P39678 833 aa3.78□□□□□ -1.8
MSD1YPL104W GDH3P39708 457 aa3.78□□□□□ -1.8
MSD1YPL104W SAP1P39955 897 aaKnown RBP3.78□□□□□ -1.8
MSD1YPL104W PSF2P40359 213 aa3.78□□□□□ -1.8
MSD1YPL104W ASG1P40467 964 aa3.78□□□□□ -1.8
MSD1YPL104W YNL320WP42840 284 aa3.78□□□□□ -1.8
MSD1YPL104W LAM5P43560 674 aa3.78□□□□□ -1.8
MSD1YPL104W YJR039WP47107 1121 aa3.78□□□□□ -1.8
MSD1YPL104W PUS2P53167 370 aa3.78□□□□□ -1.8
MSD1YPL104W HOP2P53187 214 aa3.78□□□□□ -1.8
MSD1YPL104W YNR040WP53736 256 aa3.78□□□□□ -1.8
MSD1YPL104W ALG11P53954 548 aaKnown RBP3.78□□□□□ -1.8
MSD1YPL104W RPL22BP56628 122 aaKnown RBP3.78□□□□□ -1.8
MSD1YPL104W UTP6Q02354 440 aaKnown RBP3.78□□□□□ -1.8
MSD1YPL104W NOG1Q02892 647 aaKnown RBP3.78□□□□□ -1.8
MSD1YPL104W DOT1Q04089 582 aaKnown RBP3.78□□□□□ -1.8
MSD1YPL104W YDR278CQ05612 105 aa3.78□□□□□ -1.8
MSD1YPL104W OMS1Q06668 471 aa3.78□□□□□ -1.8
MSD1YPL104W YDL121CQ07541 149 aa3.78□□□□□ -1.8
MSD1YPL104W RUD3Q12234 484 aaKnown RBP3.78□□□□□ -1.8
MSD1YPL104W TY1A-DR3Q12441 440 aa3.78□□□□□ -1.8
MSD1YPL104W BI2P03873 423 aa3.77□□□□□ -1.81
MSD1YPL104W BI4P03879 638 aa3.77□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms