RNA–Protein interactions for RNA: YPL072W

UBP16, Transcript of Deubiquitinating enzyme anchored to the outer mitochondrial membrane, yeastyeast

Gene UBP16, Length 1,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP16YPL072W YCG1Q06680 1035 aa3.54□□□□□ -1.84
UBP16YPL072W RPL7BQ12213 244 aaKnown RBP3.54□□□□□ -1.84
UBP16YPL072W WHI2P12611 486 aa3.54□□□□□ -1.84
UBP16YPL072W CAP1P28495 268 aaKnown RBP3.54□□□□□ -1.84
UBP16YPL072W GPP1P41277 250 aaKnown RBP3.54□□□□□ -1.84
UBP16YPL072W YDL183CP48569 320 aa3.54□□□□□ -1.84
UBP16YPL072W ARR3Q06598 404 aa3.54□□□□□ -1.84
UBP16YPL072W YGR161W-CQ3E744 92 aa3.54□□□□□ -1.84
UBP16YPL072W TUF1P02992 437 aaKnown RBP3.53□□□□□ -1.84
UBP16YPL072W HMG2P12684 1045 aa3.53□□□□□ -1.84
UBP16YPL072W LOT5P34234 306 aa3.53□□□□□ -1.84
UBP16YPL072W EHT1P38295 451 aa3.53□□□□□ -1.84
UBP16YPL072W FPR3P38911 411 aaKnown RBP3.53□□□□□ -1.84
UBP16YPL072W LRO1P40345 661 aa3.53□□□□□ -1.84
UBP16YPL072W ULP2P40537 1034 aaPredicted RBP3.53□□□□□ -1.84
UBP16YPL072W GAT1P43574 510 aa3.53□□□□□ -1.84
UBP16YPL072W IRC3Q06683 689 aa3.53□□□□□ -1.84
UBP16YPL072W TGS1Q12052 315 aa3.53□□□□□ -1.84
UBP16YPL072W YMR084WA2P2R3 262 aa3.52□□□□□ -1.85
UBP16YPL072W HEM1P09950 548 aaPredicted RBP3.52□□□□□ -1.85
UBP16YPL072W DGR2P32330 852 aa3.52□□□□□ -1.85
UBP16YPL072W YGR237CP50089 785 aa3.52□□□□□ -1.85
UBP16YPL072W USA1Q03714 838 aa3.52□□□□□ -1.85
UBP16YPL072W GFD1Q04839 188 aaKnown RBP3.52□□□□□ -1.85
UBP16YPL072W ORM2Q06144 216 aa3.52□□□□□ -1.85
UBP16YPL072W RPC34P32910 317 aa3.51□□□□□ -1.85
UBP16YPL072W FAP7Q12055 197 aaPredicted RBP3.51□□□□□ -1.85
UBP16YPL072W NOP56Q12460 504 aaKnown RBP RIP-Chip data3.51□□□□□ -1.85not detected
UBP16YPL072W AQY1P0CD91 305 aa3.5□□□□□ -1.85
UBP16YPL072W HXT4P32467 576 aa3.5□□□□□ -1.85
UBP16YPL072W CCL1P37366 393 aa3.5□□□□□ -1.85
UBP16YPL072W YPT10P38146 199 aa3.5□□□□□ -1.85
UBP16YPL072W SAP4P53036 818 aa3.5□□□□□ -1.85
UBP16YPL072W ATP23P53722 227 aa3.5□□□□□ -1.85
UBP16YPL072W RGT2Q12300 763 aa3.5□□□□□ -1.85
UBP16YPL072W VPS33P20795 691 aa3.49□□□□□ -1.85
UBP16YPL072W BEM3P32873 1128 aa3.49□□□□□ -1.85
UBP16YPL072W RMA1P36001 430 aaKnown RBP3.49□□□□□ -1.85
UBP16YPL072W APD1P38281 316 aa3.49□□□□□ -1.85
UBP16YPL072W YJL193WP39542 402 aa3.49□□□□□ -1.85
UBP16YPL072W EXO1P39875 702 aa3.49□□□□□ -1.85
UBP16YPL072W PSA1P41940 361 aaKnown RBP3.49□□□□□ -1.85
UBP16YPL072W RNR4P49723 345 aaKnown RBP3.49□□□□□ -1.85
UBP16YPL072W FRE7Q12333 620 aa3.49□□□□□ -1.85
UBP16YPL072W RNR3P21672 869 aaKnown RBP3.49□□□□□ -1.85
UBP16YPL072W MRPL9P31334 269 aa3.49□□□□□ -1.85
UBP16YPL072W YFL015CP43578 164 aa3.49□□□□□ -1.85
UBP16YPL072W NMD5P46970 1048 aa3.49□□□□□ -1.85
UBP16YPL072W PEF1P53238 335 aa3.49□□□□□ -1.85
UBP16YPL072W STP1Q00947 519 aa3.49□□□□□ -1.85
UBP16YPL072W NGL1Q08213 363 aaKnown RBP3.49□□□□□ -1.85
UBP16YPL072W ATP12P22135 325 aa3.48□□□□□ -1.85
UBP16YPL072W AEP2P22136 580 aa3.48□□□□□ -1.85
UBP16YPL072W SRP68P38687 599 aaKnown RBP3.48□□□□□ -1.85
UBP16YPL072W OPT1P40897 799 aa3.48□□□□□ -1.85
UBP16YPL072W DUG1P43616 481 aaKnown RBP3.48□□□□□ -1.85
UBP16YPL072W YJL043WP47053 257 aa3.48□□□□□ -1.85
UBP16YPL072W SQS1P53866 767 aaKnown RBP3.48□□□□□ -1.85
UBP16YPL072W GSY2P27472 705 aa3.47□□□□□ -1.85
UBP16YPL072W SER1P33330 395 aaKnown RBP3.47□□□□□ -1.85
UBP16YPL072W GPP2P40106 250 aaKnown RBP3.47□□□□□ -1.85
UBP16YPL072W TDA10P42938 290 aa3.47□□□□□ -1.85
UBP16YPL072W BST1P43571 1029 aa3.47□□□□□ -1.85
UBP16YPL072W MPS1P54199 764 aa3.47□□□□□ -1.85
UBP16YPL072W WAR1Q03631 944 aa3.47□□□□□ -1.85
UBP16YPL072W SKY1Q03656 742 aa3.47□□□□□ -1.85
UBP16YPL072W YPR027CQ12079 277 aa3.47□□□□□ -1.85
UBP16YPL072W SEC3P33332 1336 aaKnown RBP3.47□□□□□ -1.85
UBP16YPL072W AAC1P04710 309 aa3.46□□□□□ -1.86
UBP16YPL072W DAL3P32459 195 aa3.46□□□□□ -1.86
UBP16YPL072W IRC5P43610 853 aa3.46□□□□□ -1.86
UBP16YPL072W BPL1P48445 690 aaPredicted RBP3.46□□□□□ -1.86
UBP16YPL072W RMP1Q12530 201 aa3.46□□□□□ -1.86
UBP16YPL072W CWH43P25618 953 aa3.45□□□□□ -1.86
UBP16YPL072W DSS4P32601 143 aa3.45□□□□□ -1.86
UBP16YPL072W ECM32P32644 1121 aaKnown RBP3.45□□□□□ -1.86
UBP16YPL072W SNO3P43544 222 aa3.45□□□□□ -1.86
UBP16YPL072W YGL081WP53156 320 aa3.45□□□□□ -1.86
UBP16YPL072W ERG13P54839 491 aaKnown RBP3.45□□□□□ -1.86
UBP16YPL072W BSP1Q06604 576 aa3.45□□□□□ -1.86
UBP16YPL072W MRN1Q08925 612 aaKnown RBP RIP-Chip data3.45□□□□□ -1.86not detected
UBP16YPL072W RDL1Q12305 139 aaKnown RBP3.45□□□□□ -1.86
UBP16YPL072W VPS5Q92331 675 aa3.45□□□□□ -1.86
UBP16YPL072W YEL076C-AP0CX16 216 aa3.44□□□□□ -1.86
UBP16YPL072W YLR464WP0CX17 216 aa3.44□□□□□ -1.86
UBP16YPL072W PCK1P10963 549 aa3.44□□□□□ -1.86
UBP16YPL072W SEC12P11655 471 aa3.44□□□□□ -1.86
UBP16YPL072W TSR4P25040 408 aa3.44□□□□□ -1.86
UBP16YPL072W YEL076CP39971 216 aa3.44□□□□□ -1.86
UBP16YPL072W PEA2P40091 420 aa3.44□□□□□ -1.86
UBP16YPL072W SPN1Q06505 410 aaPredicted RBP3.44□□□□□ -1.86
UBP16YPL072W GEP3Q08622 556 aa3.44□□□□□ -1.86
UBP16YPL072W PCL8Q08966 492 aa3.44□□□□□ -1.86
UBP16YPL072W PRS5Q12265 496 aaKnown RBP3.44□□□□□ -1.86
UBP16YPL072W BET2P20133 325 aa3.44□□□□□ -1.86
UBP16YPL072W RSC9Q03124 581 aa3.44□□□□□ -1.86
UBP16YPL072W CIR2Q08822 631 aa3.44□□□□□ -1.86
UBP16YPL072W YLR111WQ12528 110 aa3.44□□□□□ -1.86
UBP16YPL072W YPK1P12688 680 aaKnown RBP3.43□□□□□ -1.86
UBP16YPL072W YJU2P28320 278 aaPredicted RBP3.43□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 16.7 ms