RNA–Protein interactions for RNA: YOR171C

LCB4, Transcript of Sphingoid long-chain base kinase, yeastyeast

Gene LCB4, Length 1,875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCB4YOR171C GAD1Q04792 585 aa3.47□□□□□ -1.85
LCB4YOR171C NOP56Q12460 504 aaKnown RBP RIP-Chip data3.47□□□□□ -1.85not detected
LCB4YOR171C TRM11Q12463 433 aa3.47□□□□□ -1.85
LCB4YOR171C RPS21BQ3E754 87 aaKnown RBP3.47□□□□□ -1.85
LCB4YOR171C YLR358CO13565 187 aa3.47□□□□□ -1.85
LCB4YOR171C SUP35P05453 685 aaKnown RBP3.47□□□□□ -1.85
LCB4YOR171C SAN1P22470 610 aa3.47□□□□□ -1.85
LCB4YOR171C KCC4P25389 1037 aa3.47□□□□□ -1.85
LCB4YOR171C CTF13P35203 478 aa3.47□□□□□ -1.85
LCB4YOR171C SKI2P35207 1287 aaKnown RBP RIP-Chip data3.47□□□□□ -1.85not detected
LCB4YOR171C CCL1P37366 393 aa3.47□□□□□ -1.85
LCB4YOR171C SPC72P39723 622 aa3.47□□□□□ -1.85
LCB4YOR171C ACA1P39970 489 aa3.47□□□□□ -1.85
LCB4YOR171C MDE1P47095 244 aa3.47□□□□□ -1.85
LCB4YOR171C RNR4P49723 345 aaKnown RBP3.47□□□□□ -1.85
LCB4YOR171C MCM6P53091 1017 aaKnown RBP3.47□□□□□ -1.85
LCB4YOR171C MNP1P53163 194 aaPredicted RBP3.47□□□□□ -1.85
LCB4YOR171C RBG2P53295 368 aaKnown RBP3.47□□□□□ -1.85
LCB4YOR171C YNL247WP53852 767 aaKnown RBP3.47□□□□□ -1.85
LCB4YOR171C TRS130Q03660 1102 aa3.47□□□□□ -1.85
LCB4YOR171C GGA1Q06336 557 aa3.47□□□□□ -1.85
LCB4YOR171C ENB1Q08299 606 aa3.47□□□□□ -1.85
LCB4YOR171C KAR3P17119 729 aa3.46□□□□□ -1.86
LCB4YOR171C MCM3P24279 971 aaKnown RBP3.46□□□□□ -1.86
LCB4YOR171C CAD1P24813 409 aaKnown RBP3.46□□□□□ -1.86
LCB4YOR171C RER1P25560 188 aa3.46□□□□□ -1.86
LCB4YOR171C PET309P32522 965 aaPredicted RBP3.46□□□□□ -1.86
LCB4YOR171C MRE11P32829 692 aa3.46□□□□□ -1.86
LCB4YOR171C RPP1P38786 293 aa3.46□□□□□ -1.86
LCB4YOR171C CTM1P38818 585 aa3.46□□□□□ -1.86
LCB4YOR171C YHR131CP38835 850 aa3.46□□□□□ -1.86
LCB4YOR171C PEX18P38855 283 aa3.46□□□□□ -1.86
LCB4YOR171C BEM4P39011 633 aa3.46□□□□□ -1.86
LCB4YOR171C RAD26P40352 1085 aa3.46□□□□□ -1.86
LCB4YOR171C ERR3P42222 437 aa3.46□□□□□ -1.86
LCB4YOR171C FYV8P46949 817 aaKnown RBP3.46□□□□□ -1.86
LCB4YOR171C BUL1P48524 976 aa3.46□□□□□ -1.86
LCB4YOR171C MNN10P50108 393 aaKnown RBP3.46□□□□□ -1.86
LCB4YOR171C NNF2P53253 936 aa3.46□□□□□ -1.86
LCB4YOR171C PNG1Q02890 363 aa3.46□□□□□ -1.86
LCB4YOR171C HOT1Q03213 719 aa3.46□□□□□ -1.86
LCB4YOR171C CSR1Q06705 408 aaKnown RBP3.46□□□□□ -1.86
LCB4YOR171C CUE5Q08412 411 aaKnown RBP3.46□□□□□ -1.86
LCB4YOR171C ADE2P21264 571 aaKnown RBP3.45□□□□□ -1.86
LCB4YOR171C DCG1P32460 244 aa3.45□□□□□ -1.86
LCB4YOR171C PPQ1P32945 549 aa3.45□□□□□ -1.86
LCB4YOR171C TPA1P40032 644 aaKnown RBP3.45□□□□□ -1.86
LCB4YOR171C GID8P40208 455 aa3.45□□□□□ -1.86
LCB4YOR171C DUG1P43616 481 aaKnown RBP3.45□□□□□ -1.86
LCB4YOR171C UPF3P48412 387 aaKnown RBP3.45□□□□□ -1.86
LCB4YOR171C PRP31P49704 494 aaPredicted RBP3.45□□□□□ -1.86
LCB4YOR171C HOP2P53187 214 aa3.45□□□□□ -1.86
LCB4YOR171C MRPL19P53875 158 aa3.45□□□□□ -1.86
LCB4YOR171C ORC4P54791 529 aa3.45□□□□□ -1.86
LCB4YOR171C PRP42Q03776 544 aaKnown RBP3.45□□□□□ -1.86
LCB4YOR171C SYF1Q04048 859 aaPredicted RBP3.45□□□□□ -1.86
LCB4YOR171C YKU80Q04437 629 aa3.45□□□□□ -1.86
LCB4YOR171C EIS1Q05050 843 aaKnown RBP3.45□□□□□ -1.86
LCB4YOR171C ARP9Q05123 467 aa3.45□□□□□ -1.86
LCB4YOR171C TAH18Q12181 623 aa3.45□□□□□ -1.86
LCB4YOR171C APC2Q12440 853 aa3.45□□□□□ -1.86
LCB4YOR171C ENT1Q12518 454 aa3.45□□□□□ -1.86
LCB4YOR171C ILS1P09436 1072 aaKnown RBP3.45□□□□□ -1.86
LCB4YOR171C PHO84P25297 587 aaKnown RBP3.45□□□□□ -1.86
LCB4YOR171C RPC53P25441 422 aa3.45□□□□□ -1.86
LCB4YOR171C CTS1P29029 562 aa3.45□□□□□ -1.86
LCB4YOR171C NGG1P32494 702 aa3.45□□□□□ -1.86
LCB4YOR171C SER1P33330 395 aaKnown RBP3.45□□□□□ -1.86
LCB4YOR171C OAF3P36023 863 aa3.45□□□□□ -1.86
LCB4YOR171C DID4P36108 232 aa3.45□□□□□ -1.86
LCB4YOR171C YBL028CP38202 106 aa3.45□□□□□ -1.86
LCB4YOR171C FAT1P38225 669 aa3.45□□□□□ -1.86
LCB4YOR171C AXL1P40851 1208 aa3.45□□□□□ -1.86
LCB4YOR171C NIT2P47016 307 aa3.45□□□□□ -1.86
LCB4YOR171C TAN1P53072 289 aaPredicted RBP3.45□□□□□ -1.86
LCB4YOR171C YAP1802P53309 568 aa3.45□□□□□ -1.86
LCB4YOR171C GTR1Q00582 310 aa3.45□□□□□ -1.86
LCB4YOR171C ARG5,6Q01217 863 aa3.45□□□□□ -1.86
LCB4YOR171C FDC1Q03034 503 aa3.45□□□□□ -1.86
LCB4YOR171C NRG1Q03125 231 aa3.45□□□□□ -1.86
LCB4YOR171C SNZ1Q03148 297 aa3.45□□□□□ -1.86
LCB4YOR171C ARA2Q04212 335 aa3.45□□□□□ -1.86
LCB4YOR171C TGL5Q12043 749 aa3.45□□□□□ -1.86
LCB4YOR171C HFI1Q12060 488 aa3.45□□□□□ -1.86
LCB4YOR171C APM4Q99186 491 aa3.45□□□□□ -1.86
LCB4YOR171C PMA1P05030 918 aaKnown RBP3.44□□□□□ -1.86
LCB4YOR171C RPB2P08518 1224 aaKnown RBP3.44□□□□□ -1.86
LCB4YOR171C MSS18P08593 268 aa3.44□□□□□ -1.86
LCB4YOR171C SWI6P09959 803 aa3.44□□□□□ -1.86
LCB4YOR171C CMK1P27466 446 aaKnown RBP3.44□□□□□ -1.86
LCB4YOR171C NTG1P31378 399 aa3.44□□□□□ -1.86
LCB4YOR171C RME1P32338 300 aaKnown RBP3.44□□□□□ -1.86
LCB4YOR171C KDX1P36005 433 aa3.44□□□□□ -1.86
LCB4YOR171C MUD2P36084 527 aaKnown RBP3.44□□□□□ -1.86
LCB4YOR171C AKL1P38080 1108 aaKnown RBP3.44□□□□□ -1.86
LCB4YOR171C FTH1P38310 465 aa3.44□□□□□ -1.86
LCB4YOR171C YBR259WP38338 688 aa3.44□□□□□ -1.86
LCB4YOR171C YHR112CP38716 378 aa3.44□□□□□ -1.86
LCB4YOR171C MPT5P39016 859 aaKnown RBP RIP-Chip data3.44□□□□□ -1.86not detected
LCB4YOR171C ECM1P39715 212 aa3.44□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 19.9 ms