RNA–Protein interactions for RNA: YNL257C

SIP3, Transcript of Transcription cofactor, yeast

Gene SIP3, Length 3,690 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIP3	YNL257C	RXT3	Q07458	294 aa		3.05	□□□□□ -1.92
SIP3	YNL257C	IQG1	Q12280	1495 aa		3.05	□□□□□ -1.92
SIP3	YNL257C	TAF2	P23255	1407 aa		3.05	□□□□□ -1.92
SIP3	YNL257C	MTF2	P10849	440 aa		3.05	□□□□□ -1.92
SIP3	YNL257C	CWH43	P25618	953 aa		3.05	□□□□□ -1.92
SIP3	YNL257C	MSS1	P32559	526 aa	Predicted RBP	3.05	□□□□□ -1.92
SIP3	YNL257C	BLS1	Q06071	122 aa		3.05	□□□□□ -1.92
SIP3	YNL257C	TRM8	Q12009	286 aa		3.05	□□□□□ -1.92
SIP3	YNL257C	PUS1	Q12211	544 aa	Known RBP	3.05	□□□□□ -1.92
SIP3	YNL257C	SNF1	P06782	633 aa	Known RBP	3.05	□□□□□ -1.92
SIP3	YNL257C	HMG2	P12684	1045 aa		3.05	□□□□□ -1.92
SIP3	YNL257C	YCL049C	P25577	312 aa		3.05	□□□□□ -1.92
SIP3	YNL257C	POL12	P38121	705 aa	Predicted RBP	3.05	□□□□□ -1.92
SIP3	YNL257C	PSY4	P38193	441 aa		3.05	□□□□□ -1.92
SIP3	YNL257C	SSP120	P39931	234 aa	Known RBP	3.05	□□□□□ -1.92
SIP3	YNL257C	TRM13	Q12383	476 aa		3.05	□□□□□ -1.92
SIP3	YNL257C	ATG11	Q12527	1178 aa		3.05	□□□□□ -1.92
SIP3	YNL257C	IML1	P47170	1584 aa		3.04	□□□□□ -1.92
SIP3	YNL257C	SWI4	P25302	1093 aa	Known RBP	3.04	□□□□□ -1.92
SIP3	YNL257C	SDS22	P36047	338 aa		3.04	□□□□□ -1.92
SIP3	YNL257C	IFA38	P38286	347 aa		3.04	□□□□□ -1.92
SIP3	YNL257C	EHT1	P38295	451 aa		3.04	□□□□□ -1.92
SIP3	YNL257C	ENP2	P48234	707 aa	Known RBP	3.04	□□□□□ -1.92
SIP3	YNL257C	POM34	Q12445	299 aa		3.04	□□□□□ -1.92
SIP3	YNL257C	GEA1	P47102	1408 aa	Predicted RBP	3.04	□□□□□ -1.92
SIP3	YNL257C	RPS13	P05756	151 aa	Known RBP	3.04	□□□□□ -1.92
SIP3	YNL257C	SIR1	P21691	654 aa		3.04	□□□□□ -1.92
SIP3	YNL257C	SET3	P36124	751 aa		3.04	□□□□□ -1.92
SIP3	YNL257C	YBR053C	P38235	358 aa		3.04	□□□□□ -1.92
SIP3	YNL257C	CDA2	Q06703	312 aa		3.04	□□□□□ -1.92
SIP3	YNL257C	CHC1	P22137	1653 aa	Known RBP	3.04	□□□□□ -1.92
SIP3	YNL257C	NTE1	Q04958	1679 aa		3.04	□□□□□ -1.92
SIP3	YNL257C	TSC11	P40061	1430 aa		3.04	□□□□□ -1.92
SIP3	YNL257C	TUP1	P16649	713 aa		3.04	□□□□□ -1.92
SIP3	YNL257C	PEX1	P24004	1043 aa		3.04	□□□□□ -1.92
SIP3	YNL257C	NGG1	P32494	702 aa		3.04	□□□□□ -1.92
SIP3	YNL257C	FMO1	P38866	432 aa		3.04	□□□□□ -1.92
SIP3	YNL257C	MNT3	P40549	630 aa		3.04	□□□□□ -1.92
SIP3	YNL257C	NRG1	Q03125	231 aa		3.04	□□□□□ -1.92
SIP3	YNL257C	VBA4	Q04602	768 aa	Known RBP	3.04	□□□□□ -1.92
SIP3	YNL257C	TRI1	Q05024	226 aa		3.04	□□□□□ -1.92
SIP3	YNL257C	SGO1	Q08490	590 aa		3.04	□□□□□ -1.92
SIP3	YNL257C	YLF2	P38746	405 aa		3.03	□□□□□ -1.92
SIP3	YNL257C	AXL2	P38928	823 aa		3.03	□□□□□ -1.92
SIP3	YNL257C	TAF1	P46677	1066 aa		3.03	□□□□□ -1.92
SIP3	YNL257C	TIM50	Q02776	476 aa		3.03	□□□□□ -1.92
SIP3	YNL257C	ARR3	Q06598	404 aa		3.03	□□□□□ -1.92
SIP3	YNL257C	SPT7	P35177	1332 aa		3.03	□□□□□ -1.92
SIP3	YNL257C	CDC25	P04821	1589 aa		3.03	□□□□□ -1.92
SIP3	YNL257C	VPS15	P22219	1454 aa		3.03	□□□□□ -1.92
SIP3	YNL257C	POL3	P15436	1097 aa		3.03	□□□□□ -1.92
SIP3	YNL257C	RPN12	P32496	274 aa		3.03	□□□□□ -1.92
SIP3	YNL257C	RRN3	P36070	627 aa		3.03	□□□□□ -1.92
SIP3	YNL257C	FKH2	P41813	862 aa		3.03	□□□□□ -1.92
SIP3	YNL257C	POL31	P46957	487 aa		3.03	□□□□□ -1.92
SIP3	YNL257C	UPF3	P48412	387 aa	Known RBP	3.03	□□□□□ -1.92
SIP3	YNL257C	COX18	P53239	316 aa		3.03	□□□□□ -1.92
SIP3	YNL257C	IWR1	Q07532	353 aa	Predicted RBP	3.03	□□□□□ -1.92
SIP3	YNL257C	AAD4	Q07747	329 aa		3.03	□□□□□ -1.92
SIP3	YNL257C	USO1	P25386	1790 aa		3.03	□□□□□ -1.92
SIP3	YNL257C	RRP5	Q05022	1729 aa	Known RBP	3.03	□□□□□ -1.93
SIP3	YNL257C	HAP1	P0CE41	1502 aa		3.03	□□□□□ -1.93
SIP3	YNL257C	ADE3	P07245	946 aa	Known RBP	3.03	□□□□□ -1.93
SIP3	YNL257C	ERG20	P08524	352 aa	Known RBP	3.03	□□□□□ -1.93
SIP3	YNL257C	SEG2	P34250	1132 aa		3.03	□□□□□ -1.93
SIP3	YNL257C	HRB1	P38922	454 aa	Known RBP RIP-Chip data	3.03	□□□□□ -1.93	not detected
SIP3	YNL257C	TAH11	P47112	604 aa		3.03	□□□□□ -1.93
SIP3	YNL257C	CLF1	Q12309	687 aa	Predicted RBP	3.03	□□□□□ -1.93
SIP3	YNL257C	PHO5	P00635	467 aa		3.02	□□□□□ -1.93
SIP3	YNL257C	RPP2A	P05319	106 aa	Known RBP	3.02	□□□□□ -1.93
SIP3	YNL257C	HSC82	P15108	705 aa	Known RBP	3.02	□□□□□ -1.93
SIP3	YNL257C	GUK1	P15454	187 aa	Known RBP	3.02	□□□□□ -1.93
SIP3	YNL257C	UBC1	P21734	215 aa	Known RBP	3.02	□□□□□ -1.93
SIP3	YNL257C	MPE1	P35728	441 aa	Known RBP	3.02	□□□□□ -1.93
SIP3	YNL257C	VPS27	P40343	622 aa	Known RBP	3.02	□□□□□ -1.93
SIP3	YNL257C	GSM1	P42950	618 aa		3.02	□□□□□ -1.93
SIP3	YNL257C	GAD1	Q04792	585 aa		3.02	□□□□□ -1.93
SIP3	YNL257C	YCG1	Q06680	1035 aa		3.02	□□□□□ -1.93
SIP3	YNL257C	ICL2	Q12031	575 aa		3.02	□□□□□ -1.93
SIP3	YNL257C	TY1B-NL2	Q99337	1749 aa	Known RBP	3.02	□□□□□ -1.93
SIP3	YNL257C	SOD2	P00447	233 aa		3.02	□□□□□ -1.93
SIP3	YNL257C	PRP45	P28004	379 aa	Predicted RBP	3.02	□□□□□ -1.93
SIP3	YNL257C	BCS1	P32839	456 aa		3.02	□□□□□ -1.93
SIP3	YNL257C	DPH1	P40487	425 aa	Known RBP	3.02	□□□□□ -1.93
SIP3	YNL257C	IML2	P47031	731 aa		3.02	□□□□□ -1.93
SIP3	YNL257C	VID22	Q05934	901 aa		3.02	□□□□□ -1.93
SIP3	YNL257C	YFT2	Q06676	274 aa		3.02	□□□□□ -1.93
SIP3	YNL257C	GEA2	P39993	1459 aa	Known RBP	3.02	□□□□□ -1.93
SIP3	YNL257C	TRP4	P07285	380 aa	Predicted RBP	3.01	□□□□□ -1.93
SIP3	YNL257C	FEN2	P25621	512 aa	Known RBP	3.01	□□□□□ -1.93
SIP3	YNL257C	IMP2'	P32351	346 aa		3.01	□□□□□ -1.93
SIP3	YNL257C	LIP5	P32875	414 aa		3.01	□□□□□ -1.93
SIP3	YNL257C	THI80	P35202	319 aa		3.01	□□□□□ -1.93
SIP3	YNL257C	AIM3	P38266	947 aa	Known RBP	3.01	□□□□□ -1.93
SIP3	YNL257C	NUP60	P39705	539 aa		3.01	□□□□□ -1.93
SIP3	YNL257C	SMK1	P41808	388 aa		3.01	□□□□□ -1.93
SIP3	YNL257C	LSB3	P43603	459 aa	Known RBP	3.01	□□□□□ -1.93
SIP3	YNL257C	SPT20	P50875	604 aa		3.01	□□□□□ -1.93
SIP3	YNL257C	LAT1	P12695	482 aa	Known RBP	3.01	□□□□□ -1.93
SIP3	YNL257C	XRS2	P33301	854 aa		3.01	□□□□□ -1.93

Retrieved 100 of 5,963 RNA–protein pairs in 20.6 ms