RNA–Protein interactions for RNA: YNL022C

RCM1, Transcript of rRNA m5C methyltransferase, yeast

Gene RCM1, Length 1,473 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RCM1	YNL022C	SOD2	P00447	233 aa		4.86	□□□□□ -1.63
RCM1	YNL022C	RPS13	P05756	151 aa	Known RBP	4.86	□□□□□ -1.63
RCM1	YNL022C	CDC6	P09119	513 aa		4.86	□□□□□ -1.63
RCM1	YNL022C	HOP1	P20050	605 aa		4.86	□□□□□ -1.63
RCM1	YNL022C	EMC1	P25574	760 aa		4.86	□□□□□ -1.63
RCM1	YNL022C	SWI3	P32591	825 aa		4.86	□□□□□ -1.63
RCM1	YNL022C	LRG1	P35688	1017 aa		4.86	□□□□□ -1.63
RCM1	YNL022C	YKR018C	P36114	725 aa		4.86	□□□□□ -1.63
RCM1	YNL022C	FAT1	P38225	669 aa		4.86	□□□□□ -1.63
RCM1	YNL022C	OPY1	P38271	328 aa		4.86	□□□□□ -1.63
RCM1	YNL022C	RFC1	P38630	861 aa	Known RBP	4.86	□□□□□ -1.63
RCM1	YNL022C	RAD26	P40352	1085 aa		4.86	□□□□□ -1.63
RCM1	YNL022C	YIR014W	P40570	242 aa		4.86	□□□□□ -1.63
RCM1	YNL022C	CEG1	Q01159	459 aa	Predicted RBP	4.86	□□□□□ -1.63
RCM1	YNL022C	TRS130	Q03660	1102 aa		4.86	□□□□□ -1.63
RCM1	YNL022C	OMS1	Q06668	471 aa		4.86	□□□□□ -1.63
RCM1	YNL022C	ACK1	Q07622	623 aa	Predicted RBP	4.86	□□□□□ -1.63
RCM1	YNL022C	UPC2	Q12151	913 aa		4.86	□□□□□ -1.63
RCM1	YNL022C	NGG1	P32494	702 aa		4.85	□□□□□ -1.63
RCM1	YNL022C	DUR1,2	P32528	1835 aa	Known RBP	4.85	□□□□□ -1.63
RCM1	YNL022C	SEG2	P34250	1132 aa		4.85	□□□□□ -1.63
RCM1	YNL022C	FLR1	P38124	548 aa		4.85	□□□□□ -1.63
RCM1	YNL022C	NPR2	P39923	615 aa		4.85	□□□□□ -1.63
RCM1	YNL022C	CHA4	P43634	648 aa		4.85	□□□□□ -1.63
RCM1	YNL022C	PCL10	P53124	433 aa		4.85	□□□□□ -1.63
RCM1	YNL022C	YAP6	Q03935	383 aa		4.85	□□□□□ -1.63
RCM1	YNL022C	CLF1	Q12309	687 aa	Predicted RBP	4.85	□□□□□ -1.63
RCM1	YNL022C	NPC2	Q12408	173 aa		4.85	□□□□□ -1.63
RCM1	YNL022C	GLT1	Q12680	2145 aa	Known RBP	4.84	□□□□□ -1.63
RCM1	YNL022C	CDC31	P06704	161 aa	Known RBP	4.84	□□□□□ -1.63
RCM1	YNL022C	ATP12	P22135	325 aa		4.84	□□□□□ -1.63
RCM1	YNL022C	DGR2	P32330	852 aa		4.84	□□□□□ -1.63
RCM1	YNL022C	TSA1	P34760	196 aa	Known RBP	4.84	□□□□□ -1.63
RCM1	YNL022C	RRN3	P36070	627 aa		4.84	□□□□□ -1.63
RCM1	YNL022C	APM3	P38153	483 aa		4.84	□□□□□ -1.63
RCM1	YNL022C	PZF1	P39933	429 aa		4.84	□□□□□ -1.63
RCM1	YNL022C	KAP123	P40069	1113 aa	Known RBP	4.84	□□□□□ -1.63
RCM1	YNL022C	FAF1	P40546	346 aa	Predicted RBP	4.84	□□□□□ -1.63
RCM1	YNL022C	SMK1	P41808	388 aa		4.84	□□□□□ -1.63
RCM1	YNL022C	SSY5	P47002	699 aa		4.84	□□□□□ -1.63
RCM1	YNL022C	GCV2	P49095	1034 aa		4.84	□□□□□ -1.63
RCM1	YNL022C	SPT20	P50875	604 aa		4.84	□□□□□ -1.63
RCM1	YNL022C	NCS6	P53088	359 aa		4.84	□□□□□ -1.63
RCM1	YNL022C	YGL082W	P53155	381 aa		4.84	□□□□□ -1.63
RCM1	YNL022C	RIM8	P53179	542 aa		4.84	□□□□□ -1.63
RCM1	YNL022C	FCP1	Q03254	732 aa		4.84	□□□□□ -1.63
RCM1	YNL022C	WHI4	Q07655	649 aa	Known RBP	4.84	□□□□□ -1.63
RCM1	YNL022C	DCS2	Q12123	353 aa		4.84	□□□□□ -1.63
RCM1	YNL022C	PSF3	Q12146	194 aa		4.84	□□□□□ -1.63
RCM1	YNL022C	ARP7	Q12406	477 aa		4.84	□□□□□ -1.63
RCM1	YNL022C	YLR149C	Q99296	730 aa		4.84	□□□□□ -1.63
RCM1	YNL022C	RAD50	P12753	1312 aa		4.83	□□□□□ -1.64
RCM1	YNL022C	GAS1	P22146	559 aa	Known RBP	4.83	□□□□□ -1.64
RCM1	YNL022C	IME2	P32581	645 aa		4.83	□□□□□ -1.64
RCM1	YNL022C	SLC1	P33333	303 aa		4.83	□□□□□ -1.64
RCM1	YNL022C	DUN1	P39009	513 aa		4.83	□□□□□ -1.64
RCM1	YNL022C	STL1	P39932	569 aa		4.83	□□□□□ -1.64
RCM1	YNL022C	VID28	P40547	921 aa		4.83	□□□□□ -1.64
RCM1	YNL022C	MEP3	P53390	489 aa		4.83	□□□□□ -1.64
RCM1	YNL022C	PKH1	Q03407	766 aa		4.83	□□□□□ -1.64
RCM1	YNL022C	HLR1	Q04429	423 aa		4.83	□□□□□ -1.64
RCM1	YNL022C	MCH5	Q08777	521 aa		4.83	□□□□□ -1.64
RCM1	YNL022C	MED1	Q12321	566 aa		4.83	□□□□□ -1.64
RCM1	YNL022C	SWM1	Q12379	170 aa		4.83	□□□□□ -1.64
RCM1	YNL022C	CDC16	P09798	840 aa		4.82	□□□□□ -1.64
RCM1	YNL022C	GLN4	P13188	809 aa	Known RBP	4.82	□□□□□ -1.64
RCM1	YNL022C	CDC20	P26309	610 aa		4.82	□□□□□ -1.64
RCM1	YNL022C	RPT3	P33298	428 aa	Known RBP	4.82	□□□□□ -1.64
RCM1	YNL022C	SRP68	P38687	599 aa	Known RBP	4.82	□□□□□ -1.64
RCM1	YNL022C	MTR3	P48240	250 aa	Predicted RBP	4.82	□□□□□ -1.64
RCM1	YNL022C	ASI2	P53895	289 aa		4.82	□□□□□ -1.64
RCM1	YNL022C	MOT3	P54785	490 aa	Known RBP	4.82	□□□□□ -1.64
RCM1	YNL022C	YMR210W	Q03649	449 aa		4.82	□□□□□ -1.64
RCM1	YNL022C	CDA2	Q06703	312 aa		4.82	□□□□□ -1.64
RCM1	YNL022C	NGL1	Q08213	363 aa	Known RBP	4.82	□□□□□ -1.64
RCM1	YNL022C	NUC1	P08466	329 aa		4.81	□□□□□ -1.64
RCM1	YNL022C	SWI6	P09959	803 aa		4.81	□□□□□ -1.64
RCM1	YNL022C	PRP6	P19735	899 aa	Predicted RBP	4.81	□□□□□ -1.64
RCM1	YNL022C	STE11	P23561	717 aa		4.81	□□□□□ -1.64
RCM1	YNL022C	IMP2'	P32351	346 aa		4.81	□□□□□ -1.64
RCM1	YNL022C	STE14	P32584	239 aa		4.81	□□□□□ -1.64
RCM1	YNL022C	XRS2	P33301	854 aa		4.81	□□□□□ -1.64
RCM1	YNL022C	SHM2	P37291	469 aa	Known RBP	4.81	□□□□□ -1.64
RCM1	YNL022C	AIM3	P38266	947 aa	Known RBP	4.81	□□□□□ -1.64
RCM1	YNL022C	EAF5	P39995	279 aa		4.81	□□□□□ -1.64
RCM1	YNL022C	YJR039W	P47107	1121 aa		4.81	□□□□□ -1.64
RCM1	YNL022C	ENP2	P48234	707 aa	Known RBP	4.81	□□□□□ -1.64
RCM1	YNL022C	NOP15	P53927	220 aa	Predicted RBP	4.81	□□□□□ -1.64
RCM1	YNL022C	ORC4	P54791	529 aa		4.81	□□□□□ -1.64
RCM1	YNL022C	MRPL13	Q02204	264 aa		4.81	□□□□□ -1.64
RCM1	YNL022C	TLG1	Q03322	224 aa		4.81	□□□□□ -1.64
RCM1	YNL022C	GFA1	P14742	717 aa	Known RBP	4.81	□□□□□ -1.64
RCM1	YNL022C	ELM1	P32801	640 aa		4.81	□□□□□ -1.64
RCM1	YNL022C	TGL1	P34163	548 aa		4.81	□□□□□ -1.64
RCM1	YNL022C	KTR3	P38130	404 aa	Predicted RBP	4.81	□□□□□ -1.64
RCM1	YNL022C	MUM2	P38236	366 aa		4.81	□□□□□ -1.64
RCM1	YNL022C	SIC1	P38634	284 aa		4.81	□□□□□ -1.64
RCM1	YNL022C	MIP6	P38760	659 aa	Known RBP	4.81	□□□□□ -1.64
RCM1	YNL022C	SSZ1	P38788	538 aa	Known RBP	4.81	□□□□□ -1.64
RCM1	YNL022C	SAK1	P38990	1142 aa		4.81	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 18.9 ms