RNA–Protein interactions for RNA: YKL039W

PTM1, Transcript of Protein of unknown function, yeastyeast

Gene PTM1, Length 1,572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTM1YKL039W PAF1P38351 445 aa5.31□□□□□ -1.56
PTM1YKL039W KSP1P38691 1029 aaKnown RBP5.31□□□□□ -1.56
PTM1YKL039W IZH3Q07959 543 aa5.31□□□□□ -1.56
PTM1YKL039W ULS1Q08562 1619 aa5.31□□□□□ -1.56
PTM1YKL039W STU1P38198 1513 aa5.31□□□□□ -1.56
PTM1YKL039W CDS1P38221 457 aa5.3□□□□□ -1.56
PTM1YKL039W CRG1P38892 291 aaRIP-Chip data5.3□□□□□ -1.56not detected
PTM1YKL039W PRM2P40534 656 aa5.3□□□□□ -1.56
PTM1YKL039W COG6P53959 839 aa5.3□□□□□ -1.56
PTM1YKL039W FDC1Q03034 503 aa5.3□□□□□ -1.56
PTM1YKL039W BMS1Q08965 1183 aaKnown RBP5.3□□□□□ -1.56
PTM1YKL039W RKI1Q12189 258 aa5.3□□□□□ -1.56
PTM1YKL039W EMP70P32802 667 aa5.29□□□□□ -1.56
PTM1YKL039W GMH1P36125 273 aa5.29□□□□□ -1.56
PTM1YKL039W FTR1P40088 404 aa5.29□□□□□ -1.56
PTM1YKL039W ENP2P48234 707 aaKnown RBP5.29□□□□□ -1.56
PTM1YKL039W SNF12P53628 566 aa5.29□□□□□ -1.56
PTM1YKL039W HLR1Q04429 423 aa5.29□□□□□ -1.56
PTM1YKL039W SNQ2P32568 1501 aaKnown RBP5.29□□□□□ -1.56
PTM1YKL039W HCA4P20448 770 aaKnown RBP5.29□□□□□ -1.56
PTM1YKL039W ENP1P38333 483 aaKnown RBP5.29□□□□□ -1.56
PTM1YKL039W YHR033WP38690 423 aa5.29□□□□□ -1.56
PTM1YKL039W NMA2P53204 395 aa5.29□□□□□ -1.56
PTM1YKL039W TIM50Q02776 476 aa5.29□□□□□ -1.56
PTM1YKL039W PDR12Q02785 1511 aa5.29□□□□□ -1.56
PTM1YKL039W SSB1P11484 613 aaKnown RBP5.28□□□□□ -1.56
PTM1YKL039W ELF1P36053 145 aa5.28□□□□□ -1.56
PTM1YKL039W MIT1P40002 666 aa5.28□□□□□ -1.56
PTM1YKL039W TMN3P40071 706 aa5.28□□□□□ -1.56
PTM1YKL039W SSB2P40150 613 aaKnown RBP5.28□□□□□ -1.56
PTM1YKL039W NGL1Q08213 363 aaKnown RBP5.28□□□□□ -1.56
PTM1YKL039W LAM4P38800 1345 aa5.27□□□□□ -1.57
PTM1YKL039W HMG2P12684 1045 aa5.26□□□□□ -1.57
PTM1YKL039W KCC4P25389 1037 aa5.26□□□□□ -1.57
PTM1YKL039W MRC1P25588 1096 aa5.26□□□□□ -1.57
PTM1YKL039W DGR2P32330 852 aa5.26□□□□□ -1.57
PTM1YKL039W YIL166CP40445 542 aa5.26□□□□□ -1.57
PTM1YKL039W YDL183CP48569 320 aa5.26□□□□□ -1.57
PTM1YKL039W DIP5P53388 608 aa5.26□□□□□ -1.57
PTM1YKL039W UFO1Q04511 668 aa5.26□□□□□ -1.57
PTM1YKL039W COX11P19516 300 aaKnown RBP5.25□□□□□ -1.57
PTM1YKL039W HEM12P32347 362 aaPredicted RBP5.25□□□□□ -1.57
PTM1YKL039W APL3P38065 1025 aa5.25□□□□□ -1.57
PTM1YKL039W MUP3P38734 546 aa5.25□□□□□ -1.57
PTM1YKL039W PMT6P42934 759 aa5.25□□□□□ -1.57
PTM1YKL039W IRC5P43610 853 aa5.25□□□□□ -1.57
PTM1YKL039W YCG1Q06680 1035 aa5.25□□□□□ -1.57
PTM1YKL039W MRPL7P36519 292 aa5.25□□□□□ -1.57
PTM1YKL039W YMC2P38087 329 aa5.25□□□□□ -1.57
PTM1YKL039W SPC105P53148 917 aa5.25□□□□□ -1.57
PTM1YKL039W YGR054WP53235 642 aaKnown RBP5.25□□□□□ -1.57
PTM1YKL039W SPC98P53540 846 aa5.25□□□□□ -1.57
PTM1YKL039W YDR179W-AQ03983 463 aa5.25□□□□□ -1.57
PTM1YKL039W IQG1Q12280 1495 aa5.24□□□□□ -1.57
PTM1YKL039W BUD3P25558 1636 aa5.24□□□□□ -1.57
PTM1YKL039W GDB1Q06625 1536 aa5.24□□□□□ -1.57
PTM1YKL039W PHO5P00635 467 aa5.24□□□□□ -1.57
PTM1YKL039W ADY2P25613 283 aa5.24□□□□□ -1.57
PTM1YKL039W PLC1P32383 869 aa5.24□□□□□ -1.57
PTM1YKL039W TFC4P33339 1025 aa5.24□□□□□ -1.57
PTM1YKL039W EHT1P38295 451 aa5.24□□□□□ -1.57
PTM1YKL039W SRP68P38687 599 aaKnown RBP5.24□□□□□ -1.57
PTM1YKL039W YEL020CP39994 560 aa5.24□□□□□ -1.57
PTM1YKL039W PEA2P40091 420 aa5.24□□□□□ -1.57
PTM1YKL039W FOL1P53848 824 aa5.24□□□□□ -1.57
PTM1YKL039W PDR10P51533 1564 aa5.24□□□□□ -1.57
PTM1YKL039W BNR1P40450 1375 aa5.23□□□□□ -1.57
PTM1YKL039W YEL076C-AP0CX16 216 aa5.23□□□□□ -1.57
PTM1YKL039W YLR464WP0CX17 216 aa5.23□□□□□ -1.57
PTM1YKL039W YEL076CP39971 216 aa5.23□□□□□ -1.57
PTM1YKL039W SLD3P53135 668 aa5.23□□□□□ -1.57
PTM1YKL039W MTD1Q02046 320 aaKnown RBP5.23□□□□□ -1.57
PTM1YKL039W ECM38Q05902 660 aaPredicted RBP5.23□□□□□ -1.57
PTM1YKL039W AIM41Q12032 185 aa5.23□□□□□ -1.57
PTM1YKL039W STE4P18851 423 aa5.22□□□□□ -1.57
PTM1YKL039W PPZ2P33329 710 aa5.22□□□□□ -1.57
PTM1YKL039W RMA1P36001 430 aaKnown RBP5.22□□□□□ -1.57
PTM1YKL039W EAF5P39995 279 aa5.22□□□□□ -1.57
PTM1YKL039W PEX14P53112 341 aa5.22□□□□□ -1.57
PTM1YKL039W PEF1P53238 335 aa5.22□□□□□ -1.57
PTM1YKL039W APM1Q00776 475 aaPredicted RBP5.22□□□□□ -1.57
PTM1YKL039W PEX15Q08215 383 aa5.22□□□□□ -1.57
PTM1YKL039W RPN13O13563 156 aa5.21□□□□□ -1.57
PTM1YKL039W PPE1P38796 400 aa5.21□□□□□ -1.57
PTM1YKL039W EFR3Q03653 782 aaKnown RBP5.21□□□□□ -1.57
PTM1YKL039W CWC2Q12046 339 aaPredicted RBP5.21□□□□□ -1.57
PTM1YKL039W MLP2P40457 1679 aa5.21□□□□□ -1.57
PTM1YKL039W STH1P32597 1359 aa5.21□□□□□ -1.58
PTM1YKL039W DNF3Q12674 1656 aa5.21□□□□□ -1.58
PTM1YKL039W KAR1P11927 433 aa5.21□□□□□ -1.58
PTM1YKL039W SPO11P23179 398 aa5.21□□□□□ -1.58
PTM1YKL039W FLO10P36170 1169 aa5.21□□□□□ -1.58
PTM1YKL039W EMP65P40085 556 aa5.21□□□□□ -1.58
PTM1YKL039W ATF1P40353 525 aa5.21□□□□□ -1.58
PTM1YKL039W SQS1P53866 767 aaKnown RBP5.21□□□□□ -1.58
PTM1YKL039W PHM6Q05637 104 aa5.21□□□□□ -1.58
PTM1YKL039W YOR378WQ08902 515 aa5.21□□□□□ -1.58
PTM1YKL039W VPS5Q92331 675 aa5.21□□□□□ -1.58
PTM1YKL039W CHC1P22137 1653 aaKnown RBP5.2□□□□□ -1.58
PTM1YKL039W PDR15Q04182 1529 aaKnown RBP5.2□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 7.5 ms