RNA–Protein interactions for RNA: YJL047C

RTT101, Transcript of Cullin subunit of a Roc1p-dependent E3 ubiquitin ligase complex, yeastyeast

Gene RTT101, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT101YJL047C BRE2P43132 505 aa2.18□□□□□ -2.06
RTT101YJL047C FET5P43561 622 aa2.18□□□□□ -2.06
RTT101YJL047C MSB3P48566 633 aaPredicted RBP2.18□□□□□ -2.06
RTT101YJL047C YGR045CP53229 120 aa2.18□□□□□ -2.06
RTT101YJL047C NOG2P53742 486 aaKnown RBP2.18□□□□□ -2.06
RTT101YJL047C SRT1Q03175 343 aa2.18□□□□□ -2.06
RTT101YJL047C SKG3Q06315 1026 aa2.18□□□□□ -2.06
RTT101YJL047C YLH47Q06493 454 aa2.18□□□□□ -2.06
RTT101YJL047C YDL073WQ07454 984 aa2.18□□□□□ -2.06
RTT101YJL047C RIX7Q07844 837 aaKnown RBP2.18□□□□□ -2.06
RTT101YJL047C PML1Q07930 204 aaPredicted RBP2.18□□□□□ -2.06
RTT101YJL047C YOR022CQ12204 715 aa2.18□□□□□ -2.06
RTT101YJL047C COX17Q12287 69 aa2.18□□□□□ -2.06
RTT101YJL047C PRP22P24384 1145 aaKnown RBP2.17□□□□□ -2.06
RTT101YJL047C CLB1P24868 471 aa2.17□□□□□ -2.06
RTT101YJL047C IMG2P25642 146 aaPredicted RBP2.17□□□□□ -2.06
RTT101YJL047C MGM1P32266 881 aa2.17□□□□□ -2.06
RTT101YJL047C ARP2P32381 391 aaKnown RBP2.17□□□□□ -2.06
RTT101YJL047C ASH1P34233 588 aa2.17□□□□□ -2.06
RTT101YJL047C PCH2P38126 564 aa2.17□□□□□ -2.06
RTT101YJL047C UTP9P38882 575 aaKnown RBP2.17□□□□□ -2.06
RTT101YJL047C SET5P38890 526 aaKnown RBP2.17□□□□□ -2.06
RTT101YJL047C LYS9P38999 446 aa2.17□□□□□ -2.06
RTT101YJL047C OSW5P40219 148 aa2.17□□□□□ -2.06
RTT101YJL047C PRK1P40494 810 aa2.17□□□□□ -2.06
RTT101YJL047C THI6P41835 540 aa2.17□□□□□ -2.06
RTT101YJL047C ALT1P52893 592 aa2.17□□□□□ -2.06
RTT101YJL047C NNF2P53253 936 aa2.17□□□□□ -2.06
RTT101YJL047C SPO1P53541 631 aa2.17□□□□□ -2.06
RTT101YJL047C TOF1P53840 1238 aa2.17□□□□□ -2.06
RTT101YJL047C VPS9P54787 451 aa2.17□□□□□ -2.06
RTT101YJL047C GCR2Q01722 534 aa2.17□□□□□ -2.06
RTT101YJL047C ECM22Q05958 814 aaPredicted RBP2.17□□□□□ -2.06
RTT101YJL047C STP4Q07351 490 aa2.17□□□□□ -2.06
RTT101YJL047C FMP45Q07651 309 aa2.17□□□□□ -2.06
RTT101YJL047C CTI6Q08923 506 aa2.17□□□□□ -2.06
RTT101YJL047C THI21Q08975 551 aa2.17□□□□□ -2.06
RTT101YJL047C PSY3Q12318 242 aa2.17□□□□□ -2.06
RTT101YJL047C SKM1Q12469 655 aa2.17□□□□□ -2.06
RTT101YJL047C YBR126W-AQ8TGU7 68 aa2.17□□□□□ -2.06
RTT101YJL047C YOR111WQ99210 232 aa2.17□□□□□ -2.06
RTT101YJL047C YRF1-4O13559 1382 aa2.17□□□□□ -2.06
RTT101YJL047C TUB2P02557 457 aaKnown RBP2.17□□□□□ -2.06
RTT101YJL047C URA3P03962 267 aa2.17□□□□□ -2.06
RTT101YJL047C LAT1P12695 482 aaKnown RBP2.17□□□□□ -2.06
RTT101YJL047C KAR3P17119 729 aa2.17□□□□□ -2.06
RTT101YJL047C YCK1P23291 538 aa2.17□□□□□ -2.06
RTT101YJL047C GAR1P28007 205 aaKnown RBP2.17□□□□□ -2.06
RTT101YJL047C DGR2P32330 852 aa2.17□□□□□ -2.06
RTT101YJL047C RPD3P32561 433 aa2.17□□□□□ -2.06
RTT101YJL047C AKL1P38080 1108 aaKnown RBP2.17□□□□□ -2.06
RTT101YJL047C SLN1P39928 1220 aaPredicted RBP2.17□□□□□ -2.06
RTT101YJL047C ZIM17P42844 174 aa2.17□□□□□ -2.06
RTT101YJL047C NUP85P46673 744 aa2.17□□□□□ -2.06
RTT101YJL047C AIP1P46680 615 aaKnown RBP2.17□□□□□ -2.06
RTT101YJL047C VTC4P47075 721 aa2.17□□□□□ -2.06
RTT101YJL047C GCV1P48015 400 aa2.17□□□□□ -2.06
RTT101YJL047C TCB2P48231 1178 aa2.17□□□□□ -2.06
RTT101YJL047C FOL2P51601 243 aaKnown RBP2.17□□□□□ -2.06
RTT101YJL047C IMA1P53051 589 aa2.17□□□□□ -2.06
RTT101YJL047C MNP1P53163 194 aaPredicted RBP2.17□□□□□ -2.06
RTT101YJL047C SNF12P53628 566 aa2.17□□□□□ -2.06
RTT101YJL047C RCR2Q03446 210 aaKnown RBP2.17□□□□□ -2.06
RTT101YJL047C RAD30Q04049 632 aa2.17□□□□□ -2.06
RTT101YJL047C GTB1Q04924 702 aa2.17□□□□□ -2.06
RTT101YJL047C YPR196WQ06595 470 aa2.17□□□□□ -2.06
RTT101YJL047C MLH2Q07980 695 aa2.17□□□□□ -2.06
RTT101YJL047C PHM7Q12252 991 aa2.17□□□□□ -2.06
RTT101YJL047C SAC3P46674 1301 aa2.16□□□□□ -2.06
RTT101YJL047C PRC1P00729 532 aa2.16□□□□□ -2.06
RTT101YJL047C ARG82P07250 355 aa2.16□□□□□ -2.06
RTT101YJL047C SEC53P07283 254 aaKnown RBP2.16□□□□□ -2.06
RTT101YJL047C CAF20P12962 161 aaKnown RBP2.16□□□□□ -2.06
RTT101YJL047C STE12P13574 688 aa2.16□□□□□ -2.06
RTT101YJL047C PET123P17558 318 aa2.16□□□□□ -2.06
RTT101YJL047C IME1P21190 360 aa2.16□□□□□ -2.06
RTT101YJL047C URA7P28274 579 aaKnown RBP2.16□□□□□ -2.06
RTT101YJL047C MTC7P32633 139 aa2.16□□□□□ -2.06
RTT101YJL047C GYP6P32806 458 aa2.16□□□□□ -2.06
RTT101YJL047C SAP190P36123 1033 aa2.16□□□□□ -2.06
RTT101YJL047C APE3P37302 537 aaKnown RBP2.16□□□□□ -2.06
RTT101YJL047C MUP3P38734 546 aa2.16□□□□□ -2.06
RTT101YJL047C YHR097CP38809 366 aaKnown RBP2.16□□□□□ -2.06
RTT101YJL047C MEF2P39677 819 aa2.16□□□□□ -2.06
RTT101YJL047C MET18P40469 1032 aa2.16□□□□□ -2.06
RTT101YJL047C AGX1P43567 385 aa2.16□□□□□ -2.06
RTT101YJL047C ARC1P46672 376 aaKnown RBP2.16□□□□□ -2.06
RTT101YJL047C STU2P46675 888 aa2.16□□□□□ -2.06
RTT101YJL047C YJL045WP47052 634 aa2.16□□□□□ -2.06
RTT101YJL047C ADA2Q02336 434 aa2.16□□□□□ -2.06
RTT101YJL047C YMR111CQ04461 462 aaPredicted RBP2.16□□□□□ -2.06
RTT101YJL047C MMR1Q06324 491 aa2.16□□□□□ -2.06
RTT101YJL047C AAD4Q07747 329 aa2.16□□□□□ -2.06
RTT101YJL047C PUF3Q07807 879 aaKnown RBP RIP-Chip data2.16□□□□□ -2.06not detected
RTT101YJL047C XYL2Q07993 356 aa2.16□□□□□ -2.06
RTT101YJL047C RSB1Q08417 382 aa2.16□□□□□ -2.06
RTT101YJL047C ICL2Q12031 575 aa2.16□□□□□ -2.06
RTT101YJL047C HUA2Q12134 243 aa2.16□□□□□ -2.06
RTT101YJL047C YLL058WQ12198 575 aa2.16□□□□□ -2.06
RTT101YJL047C GPM3Q12326 303 aa2.16□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms