RNA–Protein interactions for RNA: YIL076W

SEC28, Transcript of Epsilon-COP subunit of the coatomer, yeastyeast

Gene SEC28, Length 891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC28YIL076W YNL018CP53976 612 aa5.14□□□□□ -1.59
SEC28YIL076W ARR3Q06598 404 aa5.14□□□□□ -1.59
SEC28YIL076W RPL7AP05737 244 aaKnown RBP5.13□□□□□ -1.59
SEC28YIL076W ATP12P22135 325 aa5.13□□□□□ -1.59
SEC28YIL076W APN1P22936 367 aa5.13□□□□□ -1.59
SEC28YIL076W NGL1Q08213 363 aaKnown RBP5.13□□□□□ -1.59
SEC28YIL076W YPR027CQ12079 277 aa5.13□□□□□ -1.59
SEC28YIL076W RPL7BQ12213 244 aaKnown RBP5.13□□□□□ -1.59
SEC28YIL076W ICT1Q12385 394 aa5.13□□□□□ -1.59
SEC28YIL076W CAP1P28495 268 aaKnown RBP5.12□□□□□ -1.59
SEC28YIL076W RMA1P36001 430 aaKnown RBP5.12□□□□□ -1.59
SEC28YIL076W LTP1P40347 161 aa5.12□□□□□ -1.59
SEC28YIL076W GLO1P50107 326 aa5.12□□□□□ -1.59
SEC28YIL076W WHI2P12611 486 aa5.11□□□□□ -1.59
SEC28YIL076W PTP1P25044 335 aa5.11□□□□□ -1.59
SEC28YIL076W TMT1P32643 299 aa5.11□□□□□ -1.59
SEC28YIL076W LOT5P34234 306 aa5.11□□□□□ -1.59
SEC28YIL076W SQS1P53866 767 aaKnown RBP5.11□□□□□ -1.59
SEC28YIL076W YAP7Q08182 245 aa5.11□□□□□ -1.59
SEC28YIL076W RMP1Q12530 201 aa5.11□□□□□ -1.59
SEC28YIL076W HEM1P09950 548 aaPredicted RBP5.1□□□□□ -1.59
SEC28YIL076W SEC3P33332 1336 aaKnown RBP5.1□□□□□ -1.59
SEC28YIL076W YJL193WP39542 402 aa5.1□□□□□ -1.59
SEC28YIL076W GPP2P40106 250 aaKnown RBP5.1□□□□□ -1.59
SEC28YIL076W SKY1Q03656 742 aa5.1□□□□□ -1.59
SEC28YIL076W TGS1Q12052 315 aa5.1□□□□□ -1.59
SEC28YIL076W VPS33P20795 691 aa5.09□□□□□ -1.59
SEC28YIL076W CCL1P37366 393 aa5.09□□□□□ -1.59
SEC28YIL076W UBP12P39538 1254 aa5.09□□□□□ -1.59
SEC28YIL076W PEA2P40091 420 aa5.09□□□□□ -1.59
SEC28YIL076W DUG1P43616 481 aaKnown RBP5.09□□□□□ -1.59
SEC28YIL076W ATG36P46983 293 aa5.09□□□□□ -1.59
SEC28YIL076W NET1P47035 1189 aa5.09□□□□□ -1.59
SEC28YIL076W SAP4P53036 818 aa5.09□□□□□ -1.59
SEC28YIL076W DOS2P54858 310 aa5.09□□□□□ -1.59
SEC28YIL076W USA1Q03714 838 aa5.09□□□□□ -1.59
SEC28YIL076W TUF1P02992 437 aaKnown RBP5.08□□□□□ -1.6
SEC28YIL076W AQY1P0CD91 305 aa5.08□□□□□ -1.6
SEC28YIL076W YEL076C-AP0CX16 216 aa5.08□□□□□ -1.6
SEC28YIL076W YLR464WP0CX17 216 aa5.08□□□□□ -1.6
SEC28YIL076W RNR3P21672 869 aaKnown RBP5.08□□□□□ -1.6
SEC28YIL076W YEL076CP39971 216 aa5.08□□□□□ -1.6
SEC28YIL076W YFL015CP43578 164 aa5.08□□□□□ -1.6
SEC28YIL076W PEF1P53238 335 aa5.08□□□□□ -1.6
SEC28YIL076W PCK1P10963 549 aa5.07□□□□□ -1.6
SEC28YIL076W AEP2P22136 580 aa5.07□□□□□ -1.6
SEC28YIL076W EUG1P32474 517 aa5.07□□□□□ -1.6
SEC28YIL076W YPT10P38146 199 aa5.07□□□□□ -1.6
SEC28YIL076W BRN1P38170 754 aa5.07□□□□□ -1.6
SEC28YIL076W SRP68P38687 599 aaKnown RBP5.07□□□□□ -1.6
SEC28YIL076W IRC5P43610 853 aa5.07□□□□□ -1.6
SEC28YIL076W YJL043WP47053 257 aa5.07□□□□□ -1.6
SEC28YIL076W ORM2Q06144 216 aa5.07□□□□□ -1.6
SEC28YIL076W FRE7Q12333 620 aa5.07□□□□□ -1.6
SEC28YIL076W RPC34P32910 317 aa5.06□□□□□ -1.6
SEC28YIL076W YEN1P40028 759 aa5.06□□□□□ -1.6
SEC28YIL076W ULP2P40537 1034 aaPredicted RBP5.06□□□□□ -1.6
SEC28YIL076W GAT1P43574 510 aa5.06□□□□□ -1.6
SEC28YIL076W NIT2P47016 307 aa5.06□□□□□ -1.6
SEC28YIL076W YGL081WP53156 320 aa5.06□□□□□ -1.6
SEC28YIL076W ATP23P53722 227 aa5.06□□□□□ -1.6
SEC28YIL076W SEC5P89102 971 aa5.06□□□□□ -1.6
SEC28YIL076W GFD1Q04839 188 aaKnown RBP5.06□□□□□ -1.6
SEC28YIL076W YMR084WA2P2R3 262 aa5.05□□□□□ -1.6
SEC28YIL076W DSS4P32601 143 aa5.05□□□□□ -1.6
SEC28YIL076W IRC3Q06683 689 aa5.05□□□□□ -1.6
SEC28YIL076W TRE2Q08693 809 aa5.05□□□□□ -1.6
SEC28YIL076W MRN1Q08925 612 aaKnown RBP RIP-Chip data5.05□□□□□ -1.6not detected
SEC28YIL076W PCL8Q08966 492 aa5.05□□□□□ -1.6
SEC28YIL076W VPS5Q92331 675 aa5.05□□□□□ -1.6
SEC28YIL076W SEC12P11655 471 aa5.04□□□□□ -1.6
SEC28YIL076W EXO1P39875 702 aa5.04□□□□□ -1.6
SEC28YIL076W EAF5P39995 279 aa5.04□□□□□ -1.6
SEC28YIL076W MDR1P53258 950 aa5.04□□□□□ -1.6
SEC28YIL076W MTD1Q02046 320 aaKnown RBP5.04□□□□□ -1.6
SEC28YIL076W WAR1Q03631 944 aa5.04□□□□□ -1.6
SEC28YIL076W YOR378WQ08902 515 aa5.04□□□□□ -1.6
SEC28YIL076W CWC2Q12046 339 aaPredicted RBP5.04□□□□□ -1.6
SEC28YIL076W CWH43P25618 953 aa5.03□□□□□ -1.6
SEC28YIL076W MRPL9P31334 269 aa5.03□□□□□ -1.6
SEC28YIL076W BEM3P32873 1128 aa5.03□□□□□ -1.6
SEC28YIL076W MNT2P53059 558 aa5.03□□□□□ -1.6
SEC28YIL076W SPC105P53148 917 aa5.03□□□□□ -1.6
SEC28YIL076W COX11P19516 300 aaKnown RBP5.02□□□□□ -1.61
SEC28YIL076W ARG1P22768 420 aa5.02□□□□□ -1.61
SEC28YIL076W PSA1P41940 361 aaKnown RBP5.02□□□□□ -1.61
SEC28YIL076W STP1Q00947 519 aa5.02□□□□□ -1.61
SEC28YIL076W RGT2Q12300 763 aa5.02□□□□□ -1.61
SEC28YIL076W YPK1P12688 680 aaKnown RBP5.01□□□□□ -1.61
SEC28YIL076W BET2P20133 325 aa5.01□□□□□ -1.61
SEC28YIL076W APD1P38281 316 aa5.01□□□□□ -1.61
SEC28YIL076W TDA10P42938 290 aa5.01□□□□□ -1.61
SEC28YIL076W ECM38Q05902 660 aaPredicted RBP5.01□□□□□ -1.61
SEC28YIL076W AAC1P04710 309 aa5□□□□□ -1.61
SEC28YIL076W GSY2P27472 705 aa5□□□□□ -1.61
SEC28YIL076W YBR071WP38243 211 aa5□□□□□ -1.61
SEC28YIL076W OPT1P40897 799 aa5□□□□□ -1.61
SEC28YIL076W BST1P43571 1029 aa5□□□□□ -1.61
SEC28YIL076W SLD3P53135 668 aa5□□□□□ -1.61
SEC28YIL076W PRS5Q12265 496 aaKnown RBP5□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 11.3 ms