RNA–Protein interactions for RNA: YIL017C

VID28, Transcript of GID Complex subunit, serves as adaptor for regulatory subunit Vid24p, yeast

Gene VID28, Length 2,766 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VID28	YIL017C	KXD1	P53158	218 aa		4.22	□□□□□ -1.73
VID28	YIL017C	PIB2	P53191	635 aa		4.22	□□□□□ -1.73
VID28	YIL017C	MCM21	Q06675	368 aa		4.22	□□□□□ -1.73
VID28	YIL017C	SOG2	Q08817	791 aa		4.22	□□□□□ -1.73
VID28	YIL017C	TRM8	Q12009	286 aa		4.22	□□□□□ -1.73
VID28	YIL017C	CDC53	Q12018	815 aa	Known RBP	4.22	□□□□□ -1.73
VID28	YIL017C	RPL24A	P04449	155 aa	Known RBP	4.22	□□□□□ -1.73
VID28	YIL017C	PRP19	P32523	503 aa	Known RBP	4.22	□□□□□ -1.73
VID28	YIL017C	SMI1	P32566	505 aa		4.22	□□□□□ -1.73
VID28	YIL017C	CPR5	P35176	225 aa		4.22	□□□□□ -1.73
VID28	YIL017C	NAT2	P37293	288 aa		4.22	□□□□□ -1.73
VID28	YIL017C	SAP30	P38429	201 aa		4.22	□□□□□ -1.73
VID28	YIL017C	DOT5	P40553	215 aa		4.22	□□□□□ -1.73
VID28	YIL017C	HXT8	P40886	569 aa		4.22	□□□□□ -1.73
VID28	YIL017C	MPS2	P53159	387 aa		4.22	□□□□□ -1.73
VID28	YIL017C	ORC4	P54791	529 aa		4.22	□□□□□ -1.73
VID28	YIL017C	YPL034W	Q03083	165 aa		4.22	□□□□□ -1.73
VID28	YIL017C	FCP1	Q03254	732 aa		4.22	□□□□□ -1.73
VID28	YIL017C	SMP3	Q04174	516 aa		4.22	□□□□□ -1.73
VID28	YIL017C	NBA1	Q08229	501 aa	Known RBP	4.22	□□□□□ -1.73
VID28	YIL017C	TAH18	Q12181	623 aa		4.22	□□□□□ -1.73
VID28	YIL017C	HER1	Q12276	1246 aa		4.22	□□□□□ -1.73
VID28	YIL017C	RRI2	Q12348	645 aa		4.22	□□□□□ -1.73
VID28	YIL017C	ZRT2	Q12436	422 aa		4.22	□□□□□ -1.73
VID28	YIL017C	FUR4	P05316	633 aa	Known RBP	4.21	□□□□□ -1.73
VID28	YIL017C	CHO2	P05374	869 aa	Known RBP	4.21	□□□□□ -1.73
VID28	YIL017C	MRPL25	P23369	157 aa		4.21	□□□□□ -1.73
VID28	YIL017C	VPS3	P23643	1011 aa		4.21	□□□□□ -1.73
VID28	YIL017C	PAT1	P25644	796 aa	Known RBP	4.21	□□□□□ -1.73
VID28	YIL017C	RPS5	P26783	225 aa	Known RBP	4.21	□□□□□ -1.73
VID28	YIL017C	KTR2	P33550	425 aa		4.21	□□□□□ -1.73
VID28	YIL017C	MET1	P36150	593 aa		4.21	□□□□□ -1.73
VID28	YIL017C	YBR287W	P38355	427 aa		4.21	□□□□□ -1.73
VID28	YIL017C	GDH3	P39708	457 aa		4.21	□□□□□ -1.73
VID28	YIL017C	DPH1	P40487	425 aa	Known RBP	4.21	□□□□□ -1.73
VID28	YIL017C	YRB2	P40517	327 aa		4.21	□□□□□ -1.73
VID28	YIL017C	EMC2	P47133	292 aa	Known RBP	4.21	□□□□□ -1.73
VID28	YIL017C	ATP22	P50273	684 aa	Predicted RBP	4.21	□□□□□ -1.73
VID28	YIL017C	DIP5	P53388	608 aa		4.21	□□□□□ -1.73
VID28	YIL017C	YNR063W	P53749	607 aa		4.21	□□□□□ -1.73
VID28	YIL017C	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.21	□□□□□ -1.73	not detected
VID28	YIL017C	SED5	Q01590	340 aa		4.21	□□□□□ -1.73
VID28	YIL017C	INA17	Q02888	182 aa		4.21	□□□□□ -1.73
VID28	YIL017C	NSE5	Q03718	556 aa		4.21	□□□□□ -1.73
VID28	YIL017C	YLR001C	Q07895	862 aa		4.21	□□□□□ -1.73
VID28	YIL017C	RPN8	Q08723	338 aa	Known RBP	4.21	□□□□□ -1.73
VID28	YIL017C	MNL2	Q12205	849 aa		4.21	□□□□□ -1.73
VID28	YIL017C	CDC19	P00549	500 aa	Known RBP	4.21	□□□□□ -1.74
VID28	YIL017C	TEF1	P02994	458 aa	Known RBP	4.21	□□□□□ -1.74
VID28	YIL017C	CDC6	P09119	513 aa		4.21	□□□□□ -1.74
VID28	YIL017C	MPH2	P0CD99	609 aa		4.21	□□□□□ -1.74
VID28	YIL017C	RED1	P14291	827 aa		4.21	□□□□□ -1.74
VID28	YIL017C	HEM15	P16622	393 aa		4.21	□□□□□ -1.74
VID28	YIL017C	HSP60	P19882	572 aa	Known RBP	4.21	□□□□□ -1.74
VID28	YIL017C	GBP2	P25555	427 aa	Known RBP RIP-Chip data	4.21	□□□□□ -1.74	not detected
VID28	YIL017C	SIP3	P38717	1229 aa		4.21	□□□□□ -1.74
VID28	YIL017C	YTA6	P40328	754 aa		4.21	□□□□□ -1.74
VID28	YIL017C	ELP2	P42935	788 aa		4.21	□□□□□ -1.74
VID28	YIL017C	GLG2	P47011	380 aa		4.21	□□□□□ -1.74
VID28	YIL017C	FYV6	P53913	173 aa		4.21	□□□□□ -1.74
VID28	YIL017C	YNL058C	P53947	316 aa		4.21	□□□□□ -1.74
VID28	YIL017C	MEH1	Q02205	184 aa		4.21	□□□□□ -1.74
VID28	YIL017C	ELP4	Q02884	456 aa	Known RBP	4.21	□□□□□ -1.74
VID28	YIL017C	ACL4	Q03771	387 aa		4.21	□□□□□ -1.74
VID28	YIL017C	EST2	Q06163	884 aa		4.21	□□□□□ -1.74
VID28	YIL017C	RSC3	Q06639	885 aa		4.21	□□□□□ -1.74
VID28	YIL017C	TSR2	Q06672	205 aa	Known RBP	4.21	□□□□□ -1.74
VID28	YIL017C	AIM41	Q12032	185 aa		4.21	□□□□□ -1.74
VID28	YIL017C	VPS54	Q12071	889 aa		4.21	□□□□□ -1.74
VID28	YIL017C	SNU66	Q12420	587 aa	Predicted RBP	4.21	□□□□□ -1.74
VID28	YIL017C	RIM15	P43565	1770 aa		4.2	□□□□□ -1.74
VID28	YIL017C	ATP2	P00830	511 aa	Known RBP	4.2	□□□□□ -1.74
VID28	YIL017C	WHI2	P12611	486 aa		4.2	□□□□□ -1.74
VID28	YIL017C	POL3	P15436	1097 aa		4.2	□□□□□ -1.74
VID28	YIL017C	MIP1	P15801	1254 aa		4.2	□□□□□ -1.74
VID28	YIL017C	DAP2	P18962	818 aa		4.2	□□□□□ -1.74
VID28	YIL017C	MLS1	P30952	554 aa		4.2	□□□□□ -1.74
VID28	YIL017C	VMA6	P32366	345 aa	Known RBP	4.2	□□□□□ -1.74
VID28	YIL017C	NGR1	P32831	672 aa	Known RBP	4.2	□□□□□ -1.74
VID28	YIL017C	STE5	P32917	917 aa		4.2	□□□□□ -1.74
VID28	YIL017C	TEF4	P36008	412 aa	Known RBP	4.2	□□□□□ -1.74
VID28	YIL017C	APD1	P38281	316 aa		4.2	□□□□□ -1.74
VID28	YIL017C	GLO3	P38682	493 aa	Known RBP	4.2	□□□□□ -1.74
VID28	YIL017C	ROK1	P45818	564 aa	Predicted RBP	4.2	□□□□□ -1.74
VID28	YIL017C	USE1	P53146	245 aa		4.2	□□□□□ -1.74
VID28	YIL017C	CPR6	P53691	371 aa	Known RBP	4.2	□□□□□ -1.74
VID28	YIL017C	SLT2	Q00772	484 aa		4.2	□□□□□ -1.74
VID28	YIL017C	PTA1	Q01329	785 aa	Predicted RBP	4.2	□□□□□ -1.74
VID28	YIL017C	GCN5	Q03330	439 aa		4.2	□□□□□ -1.74
VID28	YIL017C	RRP17	Q04031	235 aa	Predicted RBP	4.2	□□□□□ -1.74
VID28	YIL017C	RSC2	Q06488	889 aa		4.2	□□□□□ -1.74
VID28	YIL017C	YEH2	Q07950	538 aa		4.2	□□□□□ -1.74
VID28	YIL017C	DIS3	Q08162	1001 aa	Known RBP	4.2	□□□□□ -1.74
VID28	YIL017C	ALE1	Q08548	619 aa		4.2	□□□□□ -1.74
VID28	YIL017C	APC5	Q08683	685 aa		4.2	□□□□□ -1.74
VID28	YIL017C	HSP42	Q12329	375 aa		4.2	□□□□□ -1.74
VID28	YIL017C	SNU23	Q12368	194 aa	Predicted RBP	4.2	□□□□□ -1.74
VID28	YIL017C	HIS4	P00815	799 aa	Known RBP	4.2	□□□□□ -1.74
VID28	YIL017C	ZIP1	P31111	875 aa		4.2	□□□□□ -1.74
VID28	YIL017C	DOM34	P33309	386 aa		4.2	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms