RNA–Protein interactions for RNA: YHR120W

MSH1, Transcript of DNA-binding protein of the mitochondria, yeastyeast

Gene MSH1, Length 2,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH1YHR120W GYP6P32806 458 aa5.26□□□□□ -1.57
MSH1YHR120W SQT1P35184 431 aa5.26□□□□□ -1.57
MSH1YHR120W JNM1P36224 373 aa5.26□□□□□ -1.57
MSH1YHR120W RIO2P40160 425 aaKnown RBP5.26□□□□□ -1.57
MSH1YHR120W TUB4P53378 473 aa5.26□□□□□ -1.57
MSH1YHR120W BIO5P53744 561 aaKnown RBP5.26□□□□□ -1.57
MSH1YHR120W SFB2P53953 876 aa5.26□□□□□ -1.57
MSH1YHR120W YMR187CQ03236 431 aa5.26□□□□□ -1.57
MSH1YHR120W TDA9Q04545 1251 aa5.26□□□□□ -1.57
MSH1YHR120W RGR1P19263 1082 aa5.26□□□□□ -1.57
MSH1YHR120W BLI1P35727 113 aa5.26□□□□□ -1.57
MSH1YHR120W ARP1P38696 384 aa5.26□□□□□ -1.57
MSH1YHR120W QNS1P38795 714 aaKnown RBP5.26□□□□□ -1.57
MSH1YHR120W DMA1P38823 416 aa5.26□□□□□ -1.57
MSH1YHR120W HOP2P53187 214 aa5.26□□□□□ -1.57
MSH1YHR120W MTG1Q03151 367 aaPredicted RBP5.26□□□□□ -1.57
MSH1YHR120W APC5Q08683 685 aa5.26□□□□□ -1.57
MSH1YHR120W LCB4Q12246 624 aa5.26□□□□□ -1.57
MSH1YHR120W SPO21Q12411 609 aa5.26□□□□□ -1.57
MSH1YHR120W AIR2Q12476 344 aaKnown RBP5.26□□□□□ -1.57
MSH1YHR120W BI2P03873 423 aa5.25□□□□□ -1.57
MSH1YHR120W BI4P03879 638 aa5.25□□□□□ -1.57
MSH1YHR120W RPS14AP06367 137 aaKnown RBP5.25□□□□□ -1.57
MSH1YHR120W PEP5P12868 1029 aa5.25□□□□□ -1.57
MSH1YHR120W OAF3P36023 863 aa5.25□□□□□ -1.57
MSH1YHR120W RPS14BP39516 138 aaKnown RBP5.25□□□□□ -1.57
MSH1YHR120W SAP185P40856 1058 aa5.25□□□□□ -1.57
MSH1YHR120W TAF9Q05027 157 aa5.25□□□□□ -1.57
MSH1YHR120W NCA2Q12374 616 aa5.25□□□□□ -1.57
MSH1YHR120W EMP46Q12396 444 aa5.25□□□□□ -1.57
MSH1YHR120W ZRT2Q12436 422 aa5.25□□□□□ -1.57
MSH1YHR120W BI3Q9ZZW7 517 aa5.25□□□□□ -1.57
MSH1YHR120W GAL11P19659 1081 aa5.25□□□□□ -1.57
MSH1YHR120W AEP2P22136 580 aa5.25□□□□□ -1.57
MSH1YHR120W PDB1P32473 366 aaKnown RBP5.25□□□□□ -1.57
MSH1YHR120W YBR053CP38235 358 aa5.25□□□□□ -1.57
MSH1YHR120W SSP1P38871 571 aa5.25□□□□□ -1.57
MSH1YHR120W SAK1P38990 1142 aa5.25□□□□□ -1.57
MSH1YHR120W PRK1P40494 810 aa5.25□□□□□ -1.57
MSH1YHR120W VTC4P47075 721 aa5.25□□□□□ -1.57
MSH1YHR120W YDR222WQ04925 415 aa5.25□□□□□ -1.57
MSH1YHR120W VMA4P22203 233 aaKnown RBP5.24□□□□□ -1.57
MSH1YHR120W SPT5P27692 1063 aaKnown RBP5.24□□□□□ -1.57
MSH1YHR120W PLC1P32383 869 aa5.24□□□□□ -1.57
MSH1YHR120W MED6P38782 295 aa5.24□□□□□ -1.57
MSH1YHR120W YIL161WP40449 235 aaKnown RBP5.24□□□□□ -1.57
MSH1YHR120W NSE1Q07913 336 aa5.24□□□□□ -1.57
MSH1YHR120W NOB1Q08444 459 aaKnown RBP5.24□□□□□ -1.57
MSH1YHR120W LPX1Q12405 387 aaKnown RBP5.24□□□□□ -1.57
MSH1YHR120W TOR2P32600 2474 aaKnown RBP5.24□□□□□ -1.57
MSH1YHR120W EST1P17214 699 aaPredicted RBP5.24□□□□□ -1.57
MSH1YHR120W ILV6P25605 309 aaKnown RBP5.24□□□□□ -1.57
MSH1YHR120W RRN6P32786 894 aa5.24□□□□□ -1.57
MSH1YHR120W HSP78P33416 811 aa5.24□□□□□ -1.57
MSH1YHR120W ECM13P38195 257 aa5.24□□□□□ -1.57
MSH1YHR120W SMX2P40204 77 aaKnown RBP5.24□□□□□ -1.57
MSH1YHR120W SPG3Q04398 127 aaPredicted RBP5.24□□□□□ -1.57
MSH1YHR120W AIM41Q12032 185 aa5.24□□□□□ -1.57
MSH1YHR120W YKL050CP35736 922 aa5.23□□□□□ -1.57
MSH1YHR120W SWH1P35845 1188 aa5.23□□□□□ -1.57
MSH1YHR120W CCT2P39076 527 aaKnown RBP5.23□□□□□ -1.57
MSH1YHR120W PSY2P40164 858 aa5.23□□□□□ -1.57
MSH1YHR120W ATH1P48016 1211 aa5.23□□□□□ -1.57
MSH1YHR120W RIM8P53179 542 aa5.23□□□□□ -1.57
MSH1YHR120W PIR3Q03180 325 aa5.23□□□□□ -1.57
MSH1YHR120W VPS16Q03308 798 aa5.23□□□□□ -1.57
MSH1YHR120W USA1Q03714 838 aa5.23□□□□□ -1.57
MSH1YHR120W ERV41Q04651 352 aa5.23□□□□□ -1.57
MSH1YHR120W TDA5Q06417 326 aaKnown RBP5.23□□□□□ -1.57
MSH1YHR120W FRA1Q07825 749 aa5.23□□□□□ -1.57
MSH1YHR120W CMS1Q07897 291 aaKnown RBP5.23□□□□□ -1.57
MSH1YHR120W YOR059CQ08448 450 aaKnown RBP5.23□□□□□ -1.57
MSH1YHR120W SEC39Q12745 709 aa5.23□□□□□ -1.57
MSH1YHR120W SEY1Q99287 776 aa5.23□□□□□ -1.57
MSH1YHR120W CCP1P00431 361 aa5.23□□□□□ -1.57
MSH1YHR120W RNA1P11745 407 aaKnown RBP5.23□□□□□ -1.57
MSH1YHR120W KAR3P17119 729 aa5.23□□□□□ -1.57
MSH1YHR120W CAP1P28495 268 aaKnown RBP5.23□□□□□ -1.57
MSH1YHR120W PSE1P32337 1089 aaKnown RBP5.23□□□□□ -1.57
MSH1YHR120W RAD5P32849 1169 aaPredicted RBP5.23□□□□□ -1.57
MSH1YHR120W SRB2P34162 210 aa5.23□□□□□ -1.57
MSH1YHR120W ATG12P38316 186 aa5.23□□□□□ -1.57
MSH1YHR120W LCP5P40079 357 aaPredicted RBP5.23□□□□□ -1.57
MSH1YHR120W CHS6P40955 746 aa5.23□□□□□ -1.57
MSH1YHR120W SNZ3P43545 298 aa5.23□□□□□ -1.57
MSH1YHR120W GYP8P43570 497 aa5.23□□□□□ -1.57
MSH1YHR120W YMR1P47147 688 aaKnown RBP RIP-Chip data5.23□□□□□ -1.57not detected
MSH1YHR120W YGR111WP53265 400 aa5.23□□□□□ -1.57
MSH1YHR120W SNZ2P53824 298 aa5.23□□□□□ -1.57
MSH1YHR120W SUB1P54000 292 aaKnown RBP5.23□□□□□ -1.57
MSH1YHR120W AIM32Q04689 311 aa5.23□□□□□ -1.57
MSH1YHR120W YOR387CQ08910 206 aa5.23□□□□□ -1.57
MSH1YHR120W YLR462WO13556 202 aa5.22□□□□□ -1.57
MSH1YHR120W PUT4P15380 627 aa5.22□□□□□ -1.57
MSH1YHR120W MRM1P25270 412 aa5.22□□□□□ -1.57
MSH1YHR120W KIP2P28743 706 aa5.22□□□□□ -1.57
MSH1YHR120W SET3P36124 751 aa5.22□□□□□ -1.57
MSH1YHR120W YHL049CP38722 271 aa5.22□□□□□ -1.57
MSH1YHR120W NEM1P38757 446 aa5.22□□□□□ -1.57
MSH1YHR120W SPC72P39723 622 aa5.22□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 48.3 ms