RNA–Protein interactions for RNA: YHR088W

RPF1, Transcript of Protein involved in assembly and export of the large ribosomal subunit, yeastyeast

Gene RPF1, Length 888 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPF1YHR088W CCL1P37366 393 aa3.82□□□□□ -1.8
RPF1YHR088W RSC9Q03124 581 aa3.82□□□□□ -1.8
RPF1YHR088W USA1Q03714 838 aa3.82□□□□□ -1.8
RPF1YHR088W SPN1Q06505 410 aaPredicted RBP3.82□□□□□ -1.8
RPF1YHR088W RDL1Q12305 139 aaKnown RBP3.82□□□□□ -1.8
RPF1YHR088W APM4Q99186 491 aa3.82□□□□□ -1.8
RPF1YHR088W NOP14Q99207 810 aaKnown RBP3.82□□□□□ -1.8
RPF1YHR088W URE2P23202 354 aaKnown RBP3.81□□□□□ -1.8
RPF1YHR088W CDS1P38221 457 aa3.81□□□□□ -1.8
RPF1YHR088W YGR153WP48238 217 aa3.81□□□□□ -1.8
RPF1YHR088W SCW4P53334 386 aaKnown RBP3.81□□□□□ -1.8
RPF1YHR088W RNR3P21672 869 aaKnown RBP3.8□□□□□ -1.8
RPF1YHR088W SEC65P29478 273 aa3.8□□□□□ -1.8
RPF1YHR088W LRO1P40345 661 aa3.8□□□□□ -1.8
RPF1YHR088W TDA10P42938 290 aa3.8□□□□□ -1.8
RPF1YHR088W GZF3P42944 551 aaKnown RBP3.8□□□□□ -1.8
RPF1YHR088W BST1P43571 1029 aa3.8□□□□□ -1.8
RPF1YHR088W YFL015CP43578 164 aa3.8□□□□□ -1.8
RPF1YHR088W YJR096WP47137 282 aa3.8□□□□□ -1.8
RPF1YHR088W SAP4P53036 818 aa3.8□□□□□ -1.8
RPF1YHR088W YNL058CP53947 316 aa3.8□□□□□ -1.8
RPF1YHR088W UTP14Q04500 899 aaKnown RBP3.8□□□□□ -1.8
RPF1YHR088W ENT2Q05785 613 aa3.8□□□□□ -1.8
RPF1YHR088W ARR3Q06598 404 aa3.8□□□□□ -1.8
RPF1YHR088W PRS5Q12265 496 aaKnown RBP3.8□□□□□ -1.8
RPF1YHR088W YTA7P40340 1379 aa3.79□□□□□ -1.8
RPF1YHR088W RPL8AP17076 256 aaKnown RBP3.79□□□□□ -1.8
RPF1YHR088W YIL092WP40497 633 aa3.79□□□□□ -1.8
RPF1YHR088W TIM50Q02776 476 aa3.79□□□□□ -1.8
RPF1YHR088W MRPL1Q04599 285 aa3.79□□□□□ -1.8
RPF1YHR088W YCG1Q06680 1035 aa3.79□□□□□ -1.8
RPF1YHR088W HFI1Q12060 488 aa3.79□□□□□ -1.8
RPF1YHR088W MF(ALPHA)2P32435 120 aa3.78□□□□□ -1.8
RPF1YHR088W PRP19P32523 503 aaKnown RBP3.78□□□□□ -1.8
RPF1YHR088W OAF3P36023 863 aa3.78□□□□□ -1.8
RPF1YHR088W DID4P36108 232 aa3.78□□□□□ -1.8
RPF1YHR088W PXL1P36166 706 aa3.78□□□□□ -1.8
RPF1YHR088W PTA1Q01329 785 aaPredicted RBP3.78□□□□□ -1.8
RPF1YHR088W WAR1Q03631 944 aa3.78□□□□□ -1.8
RPF1YHR088W CRC1Q12289 327 aa3.78□□□□□ -1.8
RPF1YHR088W AAC1P04710 309 aa3.77□□□□□ -1.81
RPF1YHR088W VPS33P20795 691 aa3.77□□□□□ -1.81
RPF1YHR088W YPT10P38146 199 aa3.77□□□□□ -1.81
RPF1YHR088W HXT6P39003 570 aaKnown RBP3.77□□□□□ -1.81
RPF1YHR088W HXT7P39004 570 aa3.77□□□□□ -1.81
RPF1YHR088W YJL193WP39542 402 aa3.77□□□□□ -1.81
RPF1YHR088W YPR089WO13585 888 aa3.76□□□□□ -1.81
RPF1YHR088W BI2P03873 423 aa3.76□□□□□ -1.81
RPF1YHR088W MTC7P32633 139 aa3.76□□□□□ -1.81
RPF1YHR088W YHR033WP38690 423 aa3.76□□□□□ -1.81
RPF1YHR088W CFD1P40558 293 aa3.76□□□□□ -1.81
RPF1YHR088W LSC1P53598 329 aaKnown RBP3.76□□□□□ -1.81
RPF1YHR088W ECM9Q02202 377 aa3.76□□□□□ -1.81
RPF1YHR088W NUP53Q03790 475 aa3.76□□□□□ -1.81
RPF1YHR088W CRT10Q08226 957 aa3.76□□□□□ -1.81
RPF1YHR088W NEW1Q08972 1196 aaKnown RBP3.76□□□□□ -1.81
RPF1YHR088W YTM1Q12024 460 aaPredicted RBP3.76□□□□□ -1.81
RPF1YHR088W YLR111WQ12528 110 aa3.76□□□□□ -1.81
RPF1YHR088W RPS21BQ3E754 87 aaKnown RBP3.76□□□□□ -1.81
RPF1YHR088W HMG2P12684 1045 aa3.75□□□□□ -1.81
RPF1YHR088W GLN4P13188 809 aaKnown RBP3.75□□□□□ -1.81
RPF1YHR088W MGM1P32266 881 aa3.75□□□□□ -1.81
RPF1YHR088W RAD26P40352 1085 aa3.75□□□□□ -1.81
RPF1YHR088W MNN11P46985 422 aaKnown RBP3.75□□□□□ -1.81
RPF1YHR088W YHM2Q04013 314 aa3.75□□□□□ -1.81
RPF1YHR088W TPO3Q06451 622 aa3.75□□□□□ -1.81
RPF1YHR088W YAP1P19880 650 aaKnown RBP3.74□□□□□ -1.81
RPF1YHR088W AEP2P22136 580 aa3.74□□□□□ -1.81
RPF1YHR088W TYS1P36421 394 aaKnown RBP3.74□□□□□ -1.81
RPF1YHR088W RRP8P38961 392 aaKnown RBP3.74□□□□□ -1.81
RPF1YHR088W VID28P40547 921 aa3.74□□□□□ -1.81
RPF1YHR088W SAE2P46946 345 aa3.74□□□□□ -1.81
RPF1YHR088W HLJ1P48353 224 aa3.74□□□□□ -1.81
RPF1YHR088W YDL183CP48569 320 aa3.74□□□□□ -1.81
RPF1YHR088W ALG12P53730 551 aa3.74□□□□□ -1.81
RPF1YHR088W SEC3P33332 1336 aaKnown RBP3.73□□□□□ -1.81
RPF1YHR088W SEC12P11655 471 aa3.73□□□□□ -1.81
RPF1YHR088W CDC26P14724 124 aa3.73□□□□□ -1.81
RPF1YHR088W DGR2P32330 852 aa3.73□□□□□ -1.81
RPF1YHR088W EHT1P38295 451 aa3.73□□□□□ -1.81
RPF1YHR088W YMR124WP39523 943 aaKnown RBP3.73□□□□□ -1.81
RPF1YHR088W IRC7P43623 340 aa3.73□□□□□ -1.81
RPF1YHR088W MTD1Q02046 320 aaKnown RBP3.73□□□□□ -1.81
RPF1YHR088W MTQ2Q03920 221 aaPredicted RBP3.73□□□□□ -1.81
RPF1YHR088W HRD3Q05787 833 aa3.73□□□□□ -1.81
RPF1YHR088W YJU2P28320 278 aaPredicted RBP3.72□□□□□ -1.81
RPF1YHR088W PMT3P47190 753 aa3.72□□□□□ -1.81
RPF1YHR088W PEF1P53238 335 aa3.72□□□□□ -1.81
RPF1YHR088W SQS1P53866 767 aaKnown RBP3.72□□□□□ -1.81
RPF1YHR088W YPL071CQ02864 156 aa3.72□□□□□ -1.81
RPF1YHR088W THI73Q07904 523 aa3.72□□□□□ -1.81
RPF1YHR088W AHA1Q12449 350 aaKnown RBP3.72□□□□□ -1.81
RPF1YHR088W CET1O13297 549 aaPredicted RBP3.71□□□□□ -1.82
RPF1YHR088W BET2P20133 325 aa3.71□□□□□ -1.82
RPF1YHR088W CBP3P21560 335 aa3.71□□□□□ -1.82
RPF1YHR088W PPG1P32838 368 aa3.71□□□□□ -1.82
RPF1YHR088W OAF1P39720 1047 aaPredicted RBP3.71□□□□□ -1.82
RPF1YHR088W YIL024CP40543 189 aa3.71□□□□□ -1.82
RPF1YHR088W COP1P53622 1201 aaKnown RBP3.71□□□□□ -1.82
RPF1YHR088W YER190C-BP0CX94 160 aa3.7□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 69 ms